BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019876
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]   124   4e-55
ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica...   135   3e-30
ref|XP_002518274.1| conserved hypothetical protein [Ricinus comm...    90   2e-26
ref|XP_002517741.1| conserved hypothetical protein [Ricinus comm...    58   5e-08
ref|XP_002535828.1| conserved hypothetical protein [Ricinus comm...    61   1e-07

>emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]
          Length = 280

 Score =  124 bits (312), Expect(2) = 4e-55
 Identities = 57/58 (98%), Positives = 57/58 (98%)
 Frame = -2

Query: 174 APLPAYPYKTRVGGSRSYEVPTTRSTLPKRKRCVCQVRFFLVGLGGFDQKCYAYTQDY 1
           APLPAYPYKTRVGGSRSYEVPTTRSTLPK KRCVCQVRFFLVGLGGFDQKCYAYTQDY
Sbjct: 205 APLPAYPYKTRVGGSRSYEVPTTRSTLPKGKRCVCQVRFFLVGLGGFDQKCYAYTQDY 262



 Score =  115 bits (288), Expect(2) = 4e-55
 Identities = 55/61 (90%), Positives = 56/61 (91%)
 Frame = -1

Query: 421 DDRATNPPAVAGRLFCFTIRPGRLSLPSVAYEFTSIPGRIQFPFDFSLVAVTRIRASVST 242
           DDR TNPPAVAGRLFCFTIRPGRLSLPSVAYEFTSIPGR+QFPFDFSLVAVTRIRA    
Sbjct: 148 DDRGTNPPAVAGRLFCFTIRPGRLSLPSVAYEFTSIPGRVQFPFDFSLVAVTRIRARAPL 207

Query: 241 P 239
           P
Sbjct: 208 P 208


>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477316|gb|AES58519.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 556

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/68 (94%), Positives = 65/68 (95%)
 Frame = +3

Query: 126 TSTHLLGSCMDMQEGVLLGVCRGCVCSREWIPRQVSFGGVDTLARIRVTATREKSKGNCI 305
           TST LLGSCMDMQEGVLLGVCRGCVCSREWIPRQVS GGVDTLARIRVTATREKSKGNC 
Sbjct: 175 TSTRLLGSCMDMQEGVLLGVCRGCVCSREWIPRQVSLGGVDTLARIRVTATREKSKGNCT 234

Query: 306 RPGMDVNS 329
           +PGMDVNS
Sbjct: 235 QPGMDVNS 242


>ref|XP_002518274.1| conserved hypothetical protein [Ricinus communis]
           gi|223542494|gb|EEF44034.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 431

 Score = 90.1 bits (222), Expect(2) = 2e-26
 Identities = 44/58 (75%), Positives = 47/58 (81%)
 Frame = -1

Query: 403 PPAVAGRLFCFTIRPGRLSLPSVAYEFTSIPGRIQFPFDFSLVAVTRIRASVSTPPKL 230
           P    G LF FTIRPGRLSLPSVA +F S+P R+QFPFDFSLVAVTRIR SVSTPP L
Sbjct: 74  PVCCGGALFFFTIRPGRLSLPSVACKFMSVPSRVQFPFDFSLVAVTRIRTSVSTPPNL 131



 Score = 53.9 bits (128), Expect(2) = 2e-26
 Identities = 24/29 (82%), Positives = 24/29 (82%)
 Frame = -2

Query: 240 PQN*LDEESILANKHTPYTHLGAPLPAYP 154
           P N LDEESIL NKH PYTHL APLPAYP
Sbjct: 128 PPNLLDEESILVNKHNPYTHLEAPLPAYP 156


>ref|XP_002517741.1| conserved hypothetical protein [Ricinus communis]
           gi|223543139|gb|EEF44673.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 111

 Score = 58.2 bits (139), Expect(2) = 5e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 234 FGGVDTLARIRVTATREKSKGNCIRPGMD 320
           FGG+DTLA+IRVTATREKSKGNC RPGMD
Sbjct: 8   FGGMDTLAQIRVTATREKSKGNCTRPGMD 36



 Score = 23.9 bits (50), Expect(2) = 5e-08
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +2

Query: 377 KKPPRHSRRVGCSVV 421
           K  P HSRRVG S+V
Sbjct: 37  KIAPHHSRRVGSSIV 51


>ref|XP_002535828.1| conserved hypothetical protein [Ricinus communis]
           gi|255608154|ref|XP_002538850.1| conserved hypothetical
           protein [Ricinus communis] gi|223510119|gb|EEF23533.1|
           conserved hypothetical protein [Ricinus communis]
           gi|223521805|gb|EEF26555.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 86

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = +3

Query: 234 FGGVDTLARIRVTATREKSKGNCIRPGMD 320
           FGGVDTLARIRVTATREKSKGNC RPGMD
Sbjct: 8   FGGVDTLARIRVTATREKSKGNCTRPGMD 36