BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019875
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518274.1| conserved hypothetical protein [Ricinus comm...    91   1e-16
ref|XP_002517741.1| conserved hypothetical protein [Ricinus comm...    77   1e-12
tpg|DAA47075.1| TPA: hypothetical protein ZEAMMB73_027346 [Zea m...    64   1e-08
ref|XP_002535828.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica...    57   2e-06

>ref|XP_002518274.1| conserved hypothetical protein [Ricinus communis]
           gi|223542494|gb|EEF44034.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 431

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 50/69 (72%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
 Frame = +1

Query: 121 YPILESSAELYPARISF*-RGPKKCLHLLPTVFLRNYTERVDPPLPFVLATYPKVSSPRA 297
           YPILE SA L PA   F  + PKK LHLLPTVFL+N  ERVDPP  FVLATYPKVSS R 
Sbjct: 6   YPILEPSAGLNPAPPHFLLKRPKKGLHLLPTVFLQNLIERVDPPPHFVLATYPKVSSLRV 65

Query: 298 PRRRQSNQP 324
           PRRRQ NQP
Sbjct: 66  PRRRQKNQP 74


>ref|XP_002517741.1| conserved hypothetical protein [Ricinus communis]
           gi|223543139|gb|EEF44673.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 111

 Score = 77.4 bits (189), Expect(2) = 1e-12
 Identities = 41/56 (73%), Positives = 44/56 (78%)
 Frame = -2

Query: 328 RRVGCSVVAGELLARRP*DKLLKQTGGEDRPVQYNSEERLLAAGGDISLAPFKRKC 161
           RRVG S+VAG+LL RRP    LKQ G EDRPVQ N EERLLA GGD+SLA FKRKC
Sbjct: 44  RRVGSSIVAGQLLVRRP--YFLKQKGEEDRPVQSNFEERLLAVGGDLSLALFKRKC 97



 Score = 20.4 bits (41), Expect(2) = 1e-12
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -1

Query: 158 AG*SSAEDSRIG 123
           AG SSAE SRIG
Sbjct: 100 AGLSSAEGSRIG 111


>tpg|DAA47075.1| TPA: hypothetical protein ZEAMMB73_027346 [Zea mays]
          Length = 88

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = -3

Query: 252 EGRIDPFSIIPKKDCWQQVETFLWPPSK 169
           EGRIDPFS IPKKDCWQQVETFLWPPSK
Sbjct: 61  EGRIDPFSRIPKKDCWQQVETFLWPPSK 88


>ref|XP_002535828.1| conserved hypothetical protein [Ricinus communis]
           gi|255608154|ref|XP_002538850.1| conserved hypothetical
           protein [Ricinus communis] gi|223510119|gb|EEF23533.1|
           conserved hypothetical protein [Ricinus communis]
           gi|223521805|gb|EEF26555.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 86

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/51 (66%), Positives = 35/51 (68%)
 Frame = -1

Query: 257 NGRGGSTRSV*FRRKTVGSRWRHFFGPLQKEMRAG*SSAEDSRIG*VGSCP 105
           +G GGSTRSV FRRKTVGSRWR FFGPLQKEMR             VGSCP
Sbjct: 36  DGGGGSTRSVKFRRKTVGSRWRPFFGPLQKEMRGRGVKLGRGFENRVGSCP 86


>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477316|gb|AES58519.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 556

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -1

Query: 248 GGSTRSV*FRRKTVGSRWRHFFGPLQKE 165
           GGSTRSV FRRKTVGSRWRHFFGPL+K+
Sbjct: 243 GGSTRSVEFRRKTVGSRWRHFFGPLKKK 270