BLASTX nr result
ID: Coptis25_contig00019872
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00019872 (347 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI18542.3| unnamed protein product [Vitis vinifera] 100 2e-19 ref|XP_002266039.1| PREDICTED: uncharacterized protein LOC100263... 100 2e-19 ref|XP_002327227.1| predicted protein [Populus trichocarpa] gi|2... 96 4e-18 gb|AAD39604.1|AC007454_3 F23M19.3 [Arabidopsis thaliana] 92 3e-17 ref|NP_174692.1| uncharacterized protein [Arabidopsis thaliana] ... 92 3e-17 >emb|CBI18542.3| unnamed protein product [Vitis vinifera] Length = 653 Score = 100 bits (248), Expect = 2e-19 Identities = 56/104 (53%), Positives = 66/104 (63%) Frame = +1 Query: 34 PQVGETMEKHVQESFTVPEMNTSVYGTNQNNIEDGIPRLPRALSNKSRSMKSRPAAVVKV 213 P G K ++E + PEM YG N ++I+DGIPRL RALS+KSRS KS+ AV KV Sbjct: 51 PIGGGMDNKQLREPLSAPEMERVSYGVNPDDIDDGIPRLSRALSHKSRSTKSKQVAVAKV 110 Query: 214 SEMSVXXXXXXXXXXXXXVEVLDTLGSSMTNLNLSSGFVPGAAT 345 SE+S VEVLDTLGSSMTNL+LSSGFV G T Sbjct: 111 SEVSSLLGRAGTAGLGKAVEVLDTLGSSMTNLHLSSGFVSGVTT 154 >ref|XP_002266039.1| PREDICTED: uncharacterized protein LOC100263351 [Vitis vinifera] Length = 655 Score = 100 bits (248), Expect = 2e-19 Identities = 56/104 (53%), Positives = 66/104 (63%) Frame = +1 Query: 34 PQVGETMEKHVQESFTVPEMNTSVYGTNQNNIEDGIPRLPRALSNKSRSMKSRPAAVVKV 213 P G K ++E + PEM YG N ++I+DGIPRL RALS+KSRS KS+ AV KV Sbjct: 51 PIGGGMDNKQLREPLSAPEMERVSYGVNPDDIDDGIPRLSRALSHKSRSTKSKQVAVAKV 110 Query: 214 SEMSVXXXXXXXXXXXXXVEVLDTLGSSMTNLNLSSGFVPGAAT 345 SE+S VEVLDTLGSSMTNL+LSSGFV G T Sbjct: 111 SEVSSLLGRAGTAGLGKAVEVLDTLGSSMTNLHLSSGFVSGVTT 154 >ref|XP_002327227.1| predicted protein [Populus trichocarpa] gi|222835597|gb|EEE74032.1| predicted protein [Populus trichocarpa] Length = 649 Score = 95.5 bits (236), Expect = 4e-18 Identities = 55/115 (47%), Positives = 71/115 (61%), Gaps = 1/115 (0%) Frame = +1 Query: 4 QMKKDGVLVPPQVGETME-KHVQESFTVPEMNTSVYGTNQNNIEDGIPRLPRALSNKSRS 180 ++K D P + E ++ K ++E F++PE+ Y N ++I+DGIPRL RALSNKS S Sbjct: 38 ELKIDNNANPSPIVENVDNKQLREPFSLPEVTVVQYEVNPDDIDDGIPRLSRALSNKSGS 97 Query: 181 MKSRPAAVVKVSEMSVXXXXXXXXXXXXXVEVLDTLGSSMTNLNLSSGFVPGAAT 345 KS+ AAV KVSE+S +VLDTLGSSMTNLN SSGF G T Sbjct: 98 TKSKQAAVAKVSEVSSLLGRAGTAGLGKAYDVLDTLGSSMTNLNPSSGFTSGLTT 152 >gb|AAD39604.1|AC007454_3 F23M19.3 [Arabidopsis thaliana] Length = 609 Score = 92.4 bits (228), Expect = 3e-17 Identities = 55/101 (54%), Positives = 65/101 (64%), Gaps = 2/101 (1%) Frame = +1 Query: 31 PPQVGETME--KHVQESFTVPEMNTSVYGTNQNNIEDGIPRLPRALSNKSRSMKSRPAAV 204 P V E ++ KH ESF+ P +++ G++ NIEDGIPRL R LS KSRS KSR AAV Sbjct: 47 PSPVTENVDDNKHTSESFSFPIVSS---GSHPQNIEDGIPRLSRVLSQKSRSTKSRQAAV 103 Query: 205 VKVSEMSVXXXXXXXXXXXXXVEVLDTLGSSMTNLNLSSGF 327 KVSE+S V+VLDTLGSSMTNLNLS GF Sbjct: 104 AKVSEVSSLLGRAGTMGLGKAVDVLDTLGSSMTNLNLSGGF 144 >ref|NP_174692.1| uncharacterized protein [Arabidopsis thaliana] gi|37202044|gb|AAQ89637.1| At1g34320 [Arabidopsis thaliana] gi|51970944|dbj|BAD44164.1| hypothetical protein [Arabidopsis thaliana] gi|51971088|dbj|BAD44236.1| hypothetical protein [Arabidopsis thaliana] gi|332193576|gb|AEE31697.1| uncharacterized protein [Arabidopsis thaliana] Length = 657 Score = 92.4 bits (228), Expect = 3e-17 Identities = 55/101 (54%), Positives = 65/101 (64%), Gaps = 2/101 (1%) Frame = +1 Query: 31 PPQVGETME--KHVQESFTVPEMNTSVYGTNQNNIEDGIPRLPRALSNKSRSMKSRPAAV 204 P V E ++ KH ESF+ P +++ G++ NIEDGIPRL R LS KSRS KSR AAV Sbjct: 47 PSPVTENVDDNKHTSESFSFPIVSS---GSHPQNIEDGIPRLSRVLSQKSRSTKSRQAAV 103 Query: 205 VKVSEMSVXXXXXXXXXXXXXVEVLDTLGSSMTNLNLSSGF 327 KVSE+S V+VLDTLGSSMTNLNLS GF Sbjct: 104 AKVSEVSSLLGRAGTMGLGKAVDVLDTLGSSMTNLNLSGGF 144