BLASTX nr result
ID: Coptis25_contig00019869
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00019869 (522 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002520726.1| potassium channel regulatory factor, putativ... 237 9e-61 ref|XP_002278267.1| PREDICTED: pre-mRNA-splicing factor 18-like ... 235 3e-60 ref|XP_003521247.1| PREDICTED: pre-mRNA-splicing factor 18-like ... 232 3e-59 ref|XP_003554255.1| PREDICTED: pre-mRNA-splicing factor 18-like ... 230 8e-59 ref|XP_004146980.1| PREDICTED: pre-mRNA-splicing factor 18-like ... 229 1e-58 >ref|XP_002520726.1| potassium channel regulatory factor, putative [Ricinus communis] gi|223540111|gb|EEF41688.1| potassium channel regulatory factor, putative [Ricinus communis] Length = 417 Score = 237 bits (604), Expect = 9e-61 Identities = 122/175 (69%), Positives = 137/175 (78%), Gaps = 1/175 (0%) Frame = -1 Query: 522 EVIRRLRFLKQPVTLFGEDDDSRLNRLKFTLKAGVFEVDSDMTEGQTNDFLRDIAELKKR 343 EVIRRLRFLKQP+TLFGEDDD+RL+RLK LKAG+FEVDSDMTEGQTNDFLRDIAEL+KR Sbjct: 106 EVIRRLRFLKQPITLFGEDDDARLDRLKHVLKAGIFEVDSDMTEGQTNDFLRDIAELRKR 165 Query: 342 QKTGL-SDRKRKKXXXXXXXXXXXXXXXXXXXXXXXXXXGMDIGEDLKRMKANFEELCDE 166 QK+G+ S+RKRK G+D +DLKRMKANFEELCDE Sbjct: 166 QKSGIVSERKRKDREEGAGEDGEGGEGEREMSGDGDSSGGVDADKDLKRMKANFEELCDE 225 Query: 165 DKILVFFKKLLIEWSLELYDKSDSEKRTAKGKQMFATFKQCARYLHPLFKFCRKK 1 DKILVFFK+LLIEW EL + +++EKRTAKGK M ATFKQCARYLHPLFKFCRKK Sbjct: 226 DKILVFFKRLLIEWKQELDEMAEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK 280 >ref|XP_002278267.1| PREDICTED: pre-mRNA-splicing factor 18-like [Vitis vinifera] Length = 412 Score = 235 bits (600), Expect = 3e-60 Identities = 123/175 (70%), Positives = 136/175 (77%), Gaps = 1/175 (0%) Frame = -1 Query: 522 EVIRRLRFLKQPVTLFGEDDDSRLNRLKFTLKAGVFEVDSDMTEGQTNDFLRDIAELKKR 343 EVIRRLRFLKQP+TLFGEDD +RL+RLK+ LKAG+FEVDSDMTEGQTNDFLRDIAEL+KR Sbjct: 103 EVIRRLRFLKQPITLFGEDDTARLDRLKYVLKAGIFEVDSDMTEGQTNDFLRDIAELRKR 162 Query: 342 QKTG-LSDRKRKKXXXXXXXXXXXXXXXXXXXXXXXXXXGMDIGEDLKRMKANFEELCDE 166 QKTG LSDRKRK +D +DLKRMKANFEELCDE Sbjct: 163 QKTGILSDRKRKSPEDGVEDGEGGGGDDDLSGDGGSSG--VDADKDLKRMKANFEELCDE 220 Query: 165 DKILVFFKKLLIEWSLELYDKSDSEKRTAKGKQMFATFKQCARYLHPLFKFCRKK 1 DKILVFFK+LLIEW+ EL +K + EKRTAKGK M ATFKQCARYL+PLFKFCRKK Sbjct: 221 DKILVFFKRLLIEWNQELNEKQEGEKRTAKGKSMVATFKQCARYLNPLFKFCRKK 275 >ref|XP_003521247.1| PREDICTED: pre-mRNA-splicing factor 18-like [Glycine max] Length = 413 Score = 232 bits (591), Expect = 3e-59 Identities = 119/174 (68%), Positives = 133/174 (76%) Frame = -1 Query: 522 EVIRRLRFLKQPVTLFGEDDDSRLNRLKFTLKAGVFEVDSDMTEGQTNDFLRDIAELKKR 343 EVIRRLRFLKQPVTLFGEDDD+RL+RLK+ LKAGVFEVDSDMTEGQTNDFLRDIAEL+KR Sbjct: 102 EVIRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGVFEVDSDMTEGQTNDFLRDIAELRKR 161 Query: 342 QKTGLSDRKRKKXXXXXXXXXXXXXXXXXXXXXXXXXXGMDIGEDLKRMKANFEELCDED 163 QKTG+ ++++ G D +DLKRMKANFEELCDED Sbjct: 162 QKTGILGERKRQKADDGAAEDREGGAGDDDLSDCGGSDGADADKDLKRMKANFEELCDED 221 Query: 162 KILVFFKKLLIEWSLELYDKSDSEKRTAKGKQMFATFKQCARYLHPLFKFCRKK 1 KILVFFKKLL EW EL + ++EKRTAKGK M ATFKQCARYL+PLFKFCRKK Sbjct: 222 KILVFFKKLLNEWKQELREMPEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKK 275 >ref|XP_003554255.1| PREDICTED: pre-mRNA-splicing factor 18-like [Glycine max] Length = 411 Score = 230 bits (587), Expect = 8e-59 Identities = 118/174 (67%), Positives = 133/174 (76%) Frame = -1 Query: 522 EVIRRLRFLKQPVTLFGEDDDSRLNRLKFTLKAGVFEVDSDMTEGQTNDFLRDIAELKKR 343 EVIRRLRFLKQPVTLFGEDDD+RL+RLK+ LKAGVFEVDSDMTEGQTNDFLRDIAEL+KR Sbjct: 101 EVIRRLRFLKQPVTLFGEDDDARLDRLKYVLKAGVFEVDSDMTEGQTNDFLRDIAELRKR 160 Query: 342 QKTGLSDRKRKKXXXXXXXXXXXXXXXXXXXXXXXXXXGMDIGEDLKRMKANFEELCDED 163 QKTG+ ++++ G + +DLKRMKANFEELCDED Sbjct: 161 QKTGILGERKRQKADDGAAQDREGGAGDDDLSDCGSSEGAEADKDLKRMKANFEELCDED 220 Query: 162 KILVFFKKLLIEWSLELYDKSDSEKRTAKGKQMFATFKQCARYLHPLFKFCRKK 1 KILVFFKKLL EW EL + ++EKRTAKGK M ATFKQCARYL+PLFKFCRKK Sbjct: 221 KILVFFKKLLNEWKQELREMPEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKK 274 >ref|XP_004146980.1| PREDICTED: pre-mRNA-splicing factor 18-like [Cucumis sativus] gi|449491488|ref|XP_004158914.1| PREDICTED: pre-mRNA-splicing factor 18-like [Cucumis sativus] Length = 420 Score = 229 bits (585), Expect = 1e-58 Identities = 120/175 (68%), Positives = 135/175 (77%), Gaps = 1/175 (0%) Frame = -1 Query: 522 EVIRRLRFLKQPVTLFGEDDDSRLNRLKFTLKAGVFEVDSDMTEGQTNDFLRDIAELKKR 343 EVIRRLRFLKQP+TLFGEDDD+RL+RLKF LKAG+FEVDSD+TEGQTNDFLRDIAEL+KR Sbjct: 110 EVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKR 169 Query: 342 QKTG-LSDRKRKKXXXXXXXXXXXXXXXXXXXXXXXXXXGMDIGEDLKRMKANFEELCDE 166 QKTG LS+RKR+K D +DLKRMKANF+ELC+E Sbjct: 170 QKTGILSERKRQKKEDGAGEEGDGGGADEESADGGSSGVETD--KDLKRMKANFDELCEE 227 Query: 165 DKILVFFKKLLIEWSLELYDKSDSEKRTAKGKQMFATFKQCARYLHPLFKFCRKK 1 DKILVFFK+LL EW EL + ++EKRTAKGK M ATFKQCARYLHPLFKFCRKK Sbjct: 228 DKILVFFKRLLNEWKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK 282