BLASTX nr result

ID: Coptis25_contig00019865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019865
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_172007.1| Calcium-binding tetratricopeptide family protei...   134   1e-29
ref|XP_002892269.1| calcium-binding EF hand family protein [Arab...   134   1e-29
dbj|BAF01292.1| putative O-GlcNAc transferase [Arabidopsis thali...   134   1e-29
ref|XP_002510481.1| tetratricopeptide repeat protein, tpr, putat...   132   6e-29
ref|XP_003535985.1| PREDICTED: uncharacterized TPR repeat-contai...   131   7e-29

>ref|NP_172007.1| Calcium-binding tetratricopeptide family protein [Arabidopsis
           thaliana] gi|75318061|sp|O23052.1|Y1515_ARATH RecName:
           Full=Uncharacterized TPR repeat-containing protein
           At1g05150 gi|2388582|gb|AAB71463.1| Contains similarity
           to Rattus O-GlcNAc transferase (gb|U76557) [Arabidopsis
           thaliana] gi|332189674|gb|AEE27795.1| Calcium-binding
           tetratricopeptide family protein [Arabidopsis thaliana]
          Length = 808

 Score =  134 bits (337), Expect = 1e-29
 Identities = 71/95 (74%), Positives = 78/95 (82%), Gaps = 1/95 (1%)
 Frame = +1

Query: 280 TRGSRAEKVKKIFEQFDVNKDGGLNREEMASLVVAVNPRVKFSDEQINAILDEVFKTYAE 459
           TRGSR+EKVK+IF+QFD N DGGLNREEMA+LVVAVNPRVKFSDEQINAILDEVF+TYAE
Sbjct: 3   TRGSRSEKVKRIFQQFDGNHDGGLNREEMAALVVAVNPRVKFSDEQINAILDEVFRTYAE 62

Query: 460 FID-SKGLTYEGLLRTYXXXXXXXXXXXXXLRLEL 561
           FID +KGLTY+GLLRTY             L LEL
Sbjct: 63  FIDPNKGLTYDGLLRTYDDGAGDVDRDFDALGLEL 97


>ref|XP_002892269.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297338111|gb|EFH68528.1| calcium-binding EF
           hand family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 809

 Score =  134 bits (337), Expect = 1e-29
 Identities = 71/95 (74%), Positives = 78/95 (82%), Gaps = 1/95 (1%)
 Frame = +1

Query: 280 TRGSRAEKVKKIFEQFDVNKDGGLNREEMASLVVAVNPRVKFSDEQINAILDEVFKTYAE 459
           TRGSR+EKVK+IF+QFD N DGGLNREEMA+LVVAVNPRVKFSDEQINAILDEVF+TYAE
Sbjct: 3   TRGSRSEKVKRIFQQFDGNHDGGLNREEMAALVVAVNPRVKFSDEQINAILDEVFRTYAE 62

Query: 460 FID-SKGLTYEGLLRTYXXXXXXXXXXXXXLRLEL 561
           FID +KGLTY+GLLRTY             L LEL
Sbjct: 63  FIDPNKGLTYDGLLRTYDDGAGDVDRDFDALGLEL 97


>dbj|BAF01292.1| putative O-GlcNAc transferase [Arabidopsis thaliana]
          Length = 808

 Score =  134 bits (337), Expect = 1e-29
 Identities = 71/95 (74%), Positives = 78/95 (82%), Gaps = 1/95 (1%)
 Frame = +1

Query: 280 TRGSRAEKVKKIFEQFDVNKDGGLNREEMASLVVAVNPRVKFSDEQINAILDEVFKTYAE 459
           TRGSR+EKVK+IF+QFD N DGGLNREEMA+LVVAVNPRVKFSDEQINAILDEVF+TYAE
Sbjct: 3   TRGSRSEKVKRIFQQFDGNHDGGLNREEMAALVVAVNPRVKFSDEQINAILDEVFRTYAE 62

Query: 460 FID-SKGLTYEGLLRTYXXXXXXXXXXXXXLRLEL 561
           FID +KGLTY+GLLRTY             L LEL
Sbjct: 63  FIDPNKGLTYDGLLRTYDDGAGDVDRDFDALGLEL 97


>ref|XP_002510481.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
           gi|223551182|gb|EEF52668.1| tetratricopeptide repeat
           protein, tpr, putative [Ricinus communis]
          Length = 804

 Score =  132 bits (331), Expect = 6e-29
 Identities = 68/95 (71%), Positives = 77/95 (81%), Gaps = 1/95 (1%)
 Frame = +1

Query: 280 TRGSRAEKVKKIFEQFDVNKDGGLNREEMASLVVAVNPRVKFSDEQINAILDEVFKTYAE 459
           TRGSR+EKVK+IF++FD NKDGGLNREEMA+LVVAVNPRVKFS+EQINAILDEVF+TY E
Sbjct: 3   TRGSRSEKVKRIFQKFDTNKDGGLNREEMAALVVAVNPRVKFSEEQINAILDEVFRTYGE 62

Query: 460 FID-SKGLTYEGLLRTYXXXXXXXXXXXXXLRLEL 561
           FID  KGLT++GLLRTY             L LEL
Sbjct: 63  FIDGEKGLTFDGLLRTYDDGAGDVDRDFDALELEL 97


>ref|XP_003535985.1| PREDICTED: uncharacterized TPR repeat-containing protein
           At1g05150-like [Glycine max]
          Length = 802

 Score =  131 bits (330), Expect = 7e-29
 Identities = 69/96 (71%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
 Frame = +1

Query: 280 TRGSRAEKVKKIFEQFDVNKDGGLNREEMASLVVAVNPRVKFSDEQINAILDEVFKTYAE 459
           TRG+R+EKV++IF QFD N+DGGLNREEMASLV AVNPRVKFSDEQINAILDEVF+TY E
Sbjct: 3   TRGTRSEKVRRIFNQFDANRDGGLNREEMASLVGAVNPRVKFSDEQINAILDEVFRTYGE 62

Query: 460 FID-SKGLTYEGLLRTYXXXXXXXXXXXXXLRLELV 564
           FID  KGLTYEGLLRTY             L L+LV
Sbjct: 63  FIDGDKGLTYEGLLRTYDDGAGDVDRDFDALGLDLV 98


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