BLASTX nr result
ID: Coptis25_contig00019857
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00019857 (1544 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera] 144 2e-36 gb|ADP20179.1| gag-pol polyprotein [Silene latifolia] 153 1e-34 gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 147 6e-33 dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 145 4e-32 emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera] 144 8e-32 >emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera] Length = 1521 Score = 125 bits (313), Expect(2) = 2e-36 Identities = 59/92 (64%), Positives = 70/92 (76%) Frame = +1 Query: 1048 FSQLFEVACDACKVGIGAALSQNGRLVAFYSQKLCGPSSRYSTYDVELYAVVQALRHWRH 1227 F ++FEVACDA VGIGA LSQ G VAF+S+KL G +YSTYD+E YAVVQA+RHW+H Sbjct: 914 FEKVFEVACDASHVGIGAVLSQEGHPVAFFSEKLNGAKKKYSTYDLEFYAVVQAIRHWQH 973 Query: 1228 YLLHCEFVLKYDHEALRFFNSQAKVTDCQAKW 1323 YL + EFVL DHEALR+ NSQ K+ AKW Sbjct: 974 YLSYKEFVLYSDHEALRYLNSQKKLNSRHAKW 1005 Score = 55.8 bits (133), Expect(2) = 2e-36 Identities = 28/63 (44%), Positives = 39/63 (61%) Frame = +2 Query: 1325 AFLQGYNFLLKHLPSTANKVADALSRREHILVSLRTTVFGFDELNGLYALDPFFDPIFQS 1504 +FLQ + F LKH NKVADALSR+ +LV++ TT GF+EL Y D F ++ S Sbjct: 1007 SFLQLFTFNLKHCAGIENKVADALSRKALLLVNMSTTTIGFEELKHCYDNDADFGDVYSS 1066 Query: 1505 CIN 1513 ++ Sbjct: 1067 LLS 1069 Score = 144 bits (364), Expect = 5e-32 Identities = 86/221 (38%), Positives = 123/221 (55%), Gaps = 18/221 (8%) Frame = +2 Query: 341 IETPTGKEQYNAPAPLVHAESDKSQPC-----LLKTHFSLMATPLSPSQKT-GTESWRRH 502 +E P + + + E + S+ C + + H SL+ PL K G E WRR Sbjct: 349 VEEPESELESYLKKEETYNEDEVSEECDYYDGMTEGH-SLVVRPLLTIPKVKGEEDWRRI 407 Query: 503 SIFRTRCISKGKLCSVVIDGGSTDNLVSQEMVDKLNLKTVNHPKPFSIQWFQSRNPVVVD 682 SIF+TR G+LC+++IDGGS+ N+ SQE+V+KLNLKT HP PF + W + + V Sbjct: 408 SIFQTRISCHGRLCTMIIDGGSSLNIASQELVEKLNLKTERHPNPFRVAWVNDTS-IPVS 466 Query: 683 KQCLVPFTI-EPYEDQVTCTVVPMDVCHLLLGRPCQFDHKSVHNGEFNTYSIVHNGRKLI 859 +CLV F + +E+ V C V+P+ V H+LLGRP FD K H+G NTY+++HNGRK I Sbjct: 467 FRCLVTFLFGKDFEESVWCEVLPIKVSHILLGRPWLFDRKVQHDGYENTYALIHNGRKKI 526 Query: 860 LEPLP--PPAAQKTVSA---------TFLAEAKEVGTFFVI 949 L P+ PP + +A F E+KE F + Sbjct: 527 LRPMKEVPPIKKSNENAQPKKVLTMCQFENESKETXVIFAL 567 >gb|ADP20179.1| gag-pol polyprotein [Silene latifolia] Length = 1475 Score = 153 bits (386), Expect = 1e-34 Identities = 79/181 (43%), Positives = 109/181 (60%), Gaps = 1/181 (0%) Frame = +2 Query: 392 HAESDKSQPCLLKTHFSLMATPLSPSQKTGTESWRRHSIFRTRCISKGKLCSVVIDGGST 571 H E D P SL+ + +Q E +R IFR+RC KG++C+++IDGGS Sbjct: 353 HEEDDVVMP---DAGLSLVTWRVMHTQPQPLEMDQRQQIFRSRCTIKGRVCNLIIDGGSC 409 Query: 572 DNLVSQEMVDKLNLKTVNHPKPFSIQWFQSRNPVVVDKQCLVPFTI-EPYEDQVTCTVVP 748 N+ S +++KL+L T +HP P+ ++W V VDKQCLV F+I + Y D+ C V+P Sbjct: 410 TNVASSTLIEKLSLPTQDHPSPYKLRWLNKGAEVRVDKQCLVTFSIGKNYSDEALCDVLP 469 Query: 749 MDVCHLLLGRPCQFDHKSVHNGEFNTYSIVHNGRKLILEPLPPPAAQKTVSATFLAEAKE 928 MD CHLLLGRP +FD SVH+G NTY+ RK+IL PL PP + T + L +KE Sbjct: 470 MDACHLLLGRPWEFDRDSVHHGRDNTYTFKFRSRKVILTPL-PPVLKHTTPPSMLEPSKE 528 Query: 929 V 931 V Sbjct: 529 V 529 Score = 105 bits (261), Expect(2) = 2e-27 Identities = 49/92 (53%), Positives = 62/92 (67%) Frame = +1 Query: 1048 FSQLFEVACDACKVGIGAALSQNGRLVAFYSQKLCGPSSRYSTYDVELYAVVQALRHWRH 1227 F++LFEV CDA +GIGA L Q + +A++S+KL G YSTYD E YA+V+AL HW H Sbjct: 895 FNKLFEVECDASGIGIGAVLVQEHKPIAYFSEKLSGAKLNYSTYDKEFYAIVRALNHWSH 954 Query: 1228 YLLHCEFVLKYDHEALRFFNSQAKVTDCQAKW 1323 YL FVL DHEAL++ N Q K+ AKW Sbjct: 955 YLKPRPFVLHSDHEALKYINGQHKLNHRHAKW 986 Score = 45.1 bits (105), Expect(2) = 2e-27 Identities = 24/53 (45%), Positives = 31/53 (58%) Frame = +2 Query: 1328 FLQGYNFLLKHLPSTANKVADALSRREHILVSLRTTVFGFDELNGLYALDPFF 1486 FLQ +NF K++ N VADALSRR +L + V GF+ + LY DP F Sbjct: 989 FLQSFNFSSKYIEGKDNIVADALSRRFIMLSFMEQRVLGFEYMKELYVEDPDF 1041 >gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group] gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1616 Score = 147 bits (372), Expect = 6e-33 Identities = 71/151 (47%), Positives = 94/151 (62%) Frame = +2 Query: 440 SLMATPLSPSQKTGTESWRRHSIFRTRCISKGKLCSVVIDGGSTDNLVSQEMVDKLNLKT 619 SL+ + +Q E +RH++F+T+C+ K + C V+IDGGS +NL S EMV+KL L T Sbjct: 468 SLVVQRVLSAQMERAEQNQRHTLFQTKCVIKERSCRVIIDGGSCNNLASAEMVEKLALST 527 Query: 620 VNHPKPFSIQWFQSRNPVVVDKQCLVPFTIEPYEDQVTCTVVPMDVCHLLLGRPCQFDHK 799 HP+P+ IQW S V V + V F I Y D + C VVPM C +LLGRP QFD Sbjct: 528 QPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDSINCDVVPMQACSMLLGRPWQFDKD 587 Query: 800 SVHNGEFNTYSIVHNGRKLILEPLPPPAAQK 892 S+H G+ N YS VHNG+KL+L P+ P K Sbjct: 588 SLHFGKSNQYSFVHNGKKLVLHPMSPEVILK 618 Score = 101 bits (252), Expect = 5e-19 Identities = 50/105 (47%), Positives = 68/105 (64%) Frame = +1 Query: 1048 FSQLFEVACDACKVGIGAALSQNGRLVAFYSQKLCGPSSRYSTYDVELYAVVQALRHWRH 1227 F++ FE CDA +G+G L Q G+ VA++S+KL GPS YSTYD EL+A+V+ L W+H Sbjct: 1038 FNKTFEHECDASGIGLGGVLLQEGKPVAYFSEKLSGPSLNYSTYDKELFALVRTLETWQH 1097 Query: 1228 YLLHCEFVLKYDHEALRFFNSQAKVTDCQAKWCFSTGVQFLAETP 1362 YL EFV+ DHE+L+ SQAK+ AKW V+F+ P Sbjct: 1098 YLWPKEFVIHSDHESLKHIRSQAKLNRRHAKW-----VEFIESFP 1137 >dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] Length = 1587 Score = 145 bits (365), Expect = 4e-32 Identities = 70/151 (46%), Positives = 93/151 (61%) Frame = +2 Query: 440 SLMATPLSPSQKTGTESWRRHSIFRTRCISKGKLCSVVIDGGSTDNLVSQEMVDKLNLKT 619 SL+ + +Q E + H++F+T+C+ K + C V+IDGGS +NL S EMV+KL L T Sbjct: 468 SLVVQRVLSAQMERAEQNQLHTLFQTKCVIKERSCHVIIDGGSCNNLASAEMVEKLALST 527 Query: 620 VNHPKPFSIQWFQSRNPVVVDKQCLVPFTIEPYEDQVTCTVVPMDVCHLLLGRPCQFDHK 799 HP+P+ IQW S V V + V F I Y D + C VVPM C +LLGRP QFD Sbjct: 528 QPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGSYHDSINCDVVPMQACSMLLGRPWQFDKD 587 Query: 800 SVHNGEFNTYSIVHNGRKLILEPLPPPAAQK 892 S+H G+ N YS VHNG+KL+L P+ P K Sbjct: 588 SLHFGKSNQYSFVHNGKKLVLHPMSPEVILK 618 Score = 101 bits (252), Expect = 5e-19 Identities = 50/105 (47%), Positives = 68/105 (64%) Frame = +1 Query: 1048 FSQLFEVACDACKVGIGAALSQNGRLVAFYSQKLCGPSSRYSTYDVELYAVVQALRHWRH 1227 F++ FE+ CDA +G+G L Q G+ VA++S+KL GPS YSTYD EL+A+V+ L W+H Sbjct: 1038 FNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPSLNYSTYDKELFALVRTLETWQH 1097 Query: 1228 YLLHCEFVLKYDHEALRFFNSQAKVTDCQAKWCFSTGVQFLAETP 1362 YL EFV+ DHE+L+ SQAK AKW V+F+ P Sbjct: 1098 YLWPKEFVIHSDHESLKHIRSQAKHNRRHAKW-----VEFIESFP 1137 >emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera] Length = 1392 Score = 144 bits (362), Expect = 8e-32 Identities = 75/159 (47%), Positives = 103/159 (64%), Gaps = 4/159 (2%) Frame = +2 Query: 440 SLMATPLSPSQKT-GTESWRRHSIFRTRCISKGKLCSVVIDGGSTDNLVSQEMVDKLNLK 616 SL+ PL K G E WRR SIF+TR +G+LC+++IDGGS+ N+ SQE+V+KLNLK Sbjct: 397 SLVVRPLLTVPKVKGEEDWRRTSIFQTRISCQGRLCTMIIDGGSSLNIASQELVEKLNLK 456 Query: 617 TVNHPKPFSIQWFQSRNPVVVDKQCLVPFTI-EPYEDQVTCTVVPMDVCHLLLGRPCQFD 793 T HP PF + W + + V +CLV F + +E+ V C V+P+ V H+LLGRP FD Sbjct: 457 TERHPNPFRVAWVNDTS-IPVSFRCLVTFLFGKDFEESVWCEVLPIKVSHILLGRPWLFD 515 Query: 794 HKSVHNGEFNTYSIVHNGRKLILEPLP--PPAAQKTVSA 904 K H+G NTY+++HNGRK IL P+ PP + +A Sbjct: 516 RKVQHDGYENTYALIHNGRKKILRPMKEVPPIKKSDENA 554 Score = 125 bits (313), Expect = 4e-26 Identities = 59/92 (64%), Positives = 70/92 (76%) Frame = +1 Query: 1048 FSQLFEVACDACKVGIGAALSQNGRLVAFYSQKLCGPSSRYSTYDVELYAVVQALRHWRH 1227 F ++FEVACDA VGIGA LSQ G VAF+S+KL G +YSTYD+E YAVVQA+RHW+H Sbjct: 839 FEKVFEVACDASHVGIGAVLSQEGHPVAFFSEKLNGAKKKYSTYDLEFYAVVQAIRHWQH 898 Query: 1228 YLLHCEFVLKYDHEALRFFNSQAKVTDCQAKW 1323 YL + EFVL DHEALR+ NSQ K+ AKW Sbjct: 899 YLSYKEFVLYSDHEALRYLNSQKKLNSRHAKW 930