BLASTX nr result

ID: Coptis25_contig00019850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019850
         (1504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35803.3| unnamed protein product [Vitis vinifera]              599   e-169
ref|XP_002516200.1| DNA binding protein, putative [Ricinus commu...   593   e-167
ref|XP_002277324.1| PREDICTED: AT-rich interactive domain-contai...   577   e-162
ref|XP_002324130.1| predicted protein [Populus trichocarpa] gi|2...   576   e-162
ref|XP_003547888.1| PREDICTED: uncharacterized protein LOC100816...   558   e-156

>emb|CBI35803.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  599 bits (1544), Expect = e-169
 Identities = 300/432 (69%), Positives = 336/432 (77%), Gaps = 1/432 (0%)
 Frame = +3

Query: 3    KSQLVHALPIRGESNRSLSVPRTSASIACGSTVYEVCMKVPAWASQVLRQLATKISFRSL 182
            +SQLVHALP    +   LS PR SASIACG+ V+EVC KVPAWASQVLRQLA  +S+RSL
Sbjct: 341  QSQLVHALPYSEGNKPPLSEPRRSASIACGAAVFEVCAKVPAWASQVLRQLAPDVSYRSL 400

Query: 183  AALGIATIQGSCVASFDKDDTERLLFFSTRQERDLLQHAI-PSSPPSWLRPPTPSRKRSV 359
             ALGIA+IQG  VASF+KDD  RLLFF TRQ + +  +   PS  PSWL+PP PSRKR  
Sbjct: 401  VALGIASIQGLAVASFEKDDANRLLFFCTRQGKYIHPNNFTPSRLPSWLKPPPPSRKRVE 460

Query: 360  SQQETKLHCVASEGKTGAADIYPDNGNGSGSFDFSDVPFLPVRKKLKVAAMRPIPHVLHH 539
              Q+T                     NG        +P LP  ++LKVAAMRPIPH+ HH
Sbjct: 461  PSQDTM--------------------NGV------TMPLLPAGQRLKVAAMRPIPHIRHH 494

Query: 540  KILSFPVISEADKSNGGQLKANSLPFPVPKPKPLGSGPFMHQKSLPNSYQAQQIISLNPL 719
            K+L F  ISEAD  +GGQ+KAN    P  K   +GS   MH+KS  +SYQA+QIISLNPL
Sbjct: 495  KMLPFSGISEADGHDGGQVKANLSVPPPTKHSIVGSTSAMHRKSFSSSYQAKQIISLNPL 554

Query: 720  PLKKHGCGRCPIQFCSEEEFLRDVMQFLILRGHTRLVPQCGISEFPDAILNTKRLDLYNL 899
            PLKKHGCGR PI+ CSEEEFL+DVMQFL LRGHTRL+PQ G++EFPDAILN KRLDLYNL
Sbjct: 555  PLKKHGCGRSPIRVCSEEEFLKDVMQFLNLRGHTRLIPQGGLAEFPDAILNAKRLDLYNL 614

Query: 900  YREVVSRGGFHVGNGINWKGQVFSKMRNHTVTNKMTGVGNTLKKHYEAYLLEYELAHDDV 1079
            YREVVSRGGFHVGNGINWKGQVFSKMRNHTVTN+MTGVGNTLK+HYE YLLEYELAHDDV
Sbjct: 615  YREVVSRGGFHVGNGINWKGQVFSKMRNHTVTNRMTGVGNTLKRHYETYLLEYELAHDDV 674

Query: 1080 DGECCLLCHSCAAGDWVNCGICGEWAHFGCDRRKGLGAFKDYAKTDGLEYICPQCSITNF 1259
            DGECCLLCHS AAGDWVNCGICGEWAHFGCDRR+GLGAFKDYAKTDGLEYICPQCS+TNF
Sbjct: 675  DGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYICPQCSVTNF 734

Query: 1260 SRKPKKSANGYS 1295
             +K  K+ NG+S
Sbjct: 735  KKKANKAPNGFS 746


>ref|XP_002516200.1| DNA binding protein, putative [Ricinus communis]
            gi|223544686|gb|EEF46202.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 749

 Score =  593 bits (1529), Expect = e-167
 Identities = 300/430 (69%), Positives = 338/430 (78%), Gaps = 1/430 (0%)
 Frame = +3

Query: 6    SQLVHALPIRGESNRSLSVPRTSASIACGSTVYEVCMKVPAWASQVLRQLATKISFRSLA 185
            SQLVHALP   ES    S PR SASI CG++V+EVC+KVP+WASQVLRQLA  +S+RSL 
Sbjct: 342  SQLVHALPSSEESKLLTSEPRKSASIGCGASVFEVCLKVPSWASQVLRQLAPDVSYRSLV 401

Query: 186  ALGIATIQGSCVASFDKDDTERLLFFSTRQERDLL-QHAIPSSPPSWLRPPTPSRKRSVS 362
             LGIA+IQG  VASF+K+DTERLLFF TRQ ++L   ++I   PP WL PP PSRKRS  
Sbjct: 402  MLGIASIQGLSVASFEKEDTERLLFFCTRQGKELYPNNSIIIKPPCWLIPPAPSRKRSEP 461

Query: 363  QQETKLHCVASEGKTGAADIYPDNGNGSGSFDFSDVPFLPVRKKLKVAAMRPIPHVLHHK 542
             +ETKL    S+G      +  +NG               V++KL VAAMRPIPH  HHK
Sbjct: 462  CRETKLF--TSKG------LERENGGS-------------VKQKLNVAAMRPIPHTRHHK 500

Query: 543  ILSFPVISEADKSNGGQLKANSLPFPVPKPKPLGSGPFMHQKSLPNSYQAQQIISLNPLP 722
            +L F   +E ++ +G Q K  SLP    K   +G  P  H+KSL +SYQAQQIISLNPLP
Sbjct: 501  MLPFSGFAEGERYDGDQGKP-SLPVAPAKHGVVGPAPVSHRKSLSSSYQAQQIISLNPLP 559

Query: 723  LKKHGCGRCPIQFCSEEEFLRDVMQFLILRGHTRLVPQCGISEFPDAILNTKRLDLYNLY 902
            LKKHGCGR PIQ CSEEEFLRDVMQFLILRGHTRLVPQ G++EFPDAILN KRLDL+NLY
Sbjct: 560  LKKHGCGRAPIQACSEEEFLRDVMQFLILRGHTRLVPQGGLAEFPDAILNAKRLDLFNLY 619

Query: 903  REVVSRGGFHVGNGINWKGQVFSKMRNHTVTNKMTGVGNTLKKHYEAYLLEYELAHDDVD 1082
            REVVSRGGFHVGNGINWKGQVFSKMRNHT+TN+MTGVGNTLK+HYE YLLEYELAHDDVD
Sbjct: 620  REVVSRGGFHVGNGINWKGQVFSKMRNHTLTNRMTGVGNTLKRHYETYLLEYELAHDDVD 679

Query: 1083 GECCLLCHSCAAGDWVNCGICGEWAHFGCDRRKGLGAFKDYAKTDGLEYICPQCSITNFS 1262
            GECCLLCHS AAGDWVNCGICGEWAHFGCDRR+GLGAFKDYAKTDGLEYICP CSI NF 
Sbjct: 680  GECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYICPHCSIANFR 739

Query: 1263 RKPKKSANGY 1292
            +K +K+ANGY
Sbjct: 740  KKSQKTANGY 749


>ref|XP_002277324.1| PREDICTED: AT-rich interactive domain-containing protein 4 [Vitis
            vinifera] gi|297738501|emb|CBI27746.3| unnamed protein
            product [Vitis vinifera]
          Length = 739

 Score =  577 bits (1488), Expect = e-162
 Identities = 296/431 (68%), Positives = 331/431 (76%), Gaps = 1/431 (0%)
 Frame = +3

Query: 3    KSQLVHALPIRGESNRSLSVPRTSASIACGSTVYEVCMKVPAWASQVLRQLATKISFRSL 182
            KSQLVHA+P   ES  S S PR SASIACG++V+EV +KVP WASQVLRQLA  +S+RSL
Sbjct: 333  KSQLVHAVPSCEESKLSSSEPRRSASIACGASVFEVRIKVPTWASQVLRQLAPDVSYRSL 392

Query: 183  AALGIATIQGSCVASFDKDDTERLLFFSTRQERDLLQH-AIPSSPPSWLRPPTPSRKRSV 359
              LGIA+IQG  VASF+KDD +RLLFF TR  + L Q+ +I   PPSWL  P  SRKRS 
Sbjct: 393  VTLGIASIQGLSVASFEKDDADRLLFFCTRHAKQLNQNNSILPRPPSWLIAPPASRKRSG 452

Query: 360  SQQETKLHCVASEGKTGAADIYPDNGNGSGSFDFSDVPFLPVRKKLKVAAMRPIPHVLHH 539
               ETK               Y   G  +G           +++K K+AAMRPIPH  +H
Sbjct: 453  PCHETK------------PSGYKVLGGVNGGV---------LQQKPKIAAMRPIPHTRNH 491

Query: 540  KILSFPVISEADKSNGGQLKANSLPFPVPKPKPLGSGPFMHQKSLPNSYQAQQIISLNPL 719
            K+L F  ISEA + +G Q K N    P    K  G+ P  H+K L +S+QAQQIISLNPL
Sbjct: 492  KMLPFSGISEASRCDGDQAKGNLSVVPA---KHNGTTPVTHRKLLSSSFQAQQIISLNPL 548

Query: 720  PLKKHGCGRCPIQFCSEEEFLRDVMQFLILRGHTRLVPQCGISEFPDAILNTKRLDLYNL 899
            PLKKHGCGR PIQ CSEEEFLRDVMQFLILRGHTRLVPQ G++EFPDAILN KRLDLYNL
Sbjct: 549  PLKKHGCGRSPIQICSEEEFLRDVMQFLILRGHTRLVPQGGLAEFPDAILNAKRLDLYNL 608

Query: 900  YREVVSRGGFHVGNGINWKGQVFSKMRNHTVTNKMTGVGNTLKKHYEAYLLEYELAHDDV 1079
            YREVVSRGGFHVGNGINWKGQVFSKMRNHT+TN+MTGVGNTLK+HYE YLLEYELAHDDV
Sbjct: 609  YREVVSRGGFHVGNGINWKGQVFSKMRNHTLTNRMTGVGNTLKRHYETYLLEYELAHDDV 668

Query: 1080 DGECCLLCHSCAAGDWVNCGICGEWAHFGCDRRKGLGAFKDYAKTDGLEYICPQCSITNF 1259
            DGECCLLCHS AAGDWVNCGICGEWAHFGCDRR+GLGAFKDYAKTDGLEYICP CSITNF
Sbjct: 669  DGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYICPHCSITNF 728

Query: 1260 SRKPKKSANGY 1292
             +K +K+ANGY
Sbjct: 729  QKKSQKTANGY 739


>ref|XP_002324130.1| predicted protein [Populus trichocarpa] gi|222865564|gb|EEF02695.1|
            predicted protein [Populus trichocarpa]
          Length = 745

 Score =  576 bits (1484), Expect = e-162
 Identities = 293/430 (68%), Positives = 330/430 (76%), Gaps = 1/430 (0%)
 Frame = +3

Query: 6    SQLVHALPIRGESNRSLSVPRTSASIACGSTVYEVCMKVPAWASQVLRQLATKISFRSLA 185
            SQLVHA     ES    S PR SASIACG++V+EV MKVP WASQVLRQLA  +++RSL 
Sbjct: 340  SQLVHASTSSDESKSPSSEPRKSASIACGASVFEVSMKVPTWASQVLRQLAPDVTYRSLV 399

Query: 186  ALGIATIQGSCVASFDKDDTERLLFFSTRQERDLL-QHAIPSSPPSWLRPPTPSRKRSVS 362
             LGIA+IQG  VASF+KDD +RLLFF T+Q +D   ++ + +  PSWL PP P RKR   
Sbjct: 400  MLGIASIQGLSVASFEKDDADRLLFFCTKQSKDPHPRNPVLTRHPSWLIPPAPCRKRYEP 459

Query: 363  QQETKLHCVASEGKTGAADIYPDNGNGSGSFDFSDVPFLPVRKKLKVAAMRPIPHVLHHK 542
             +ETK       G+ G            G+F          ++KL VAAMRPIPH   HK
Sbjct: 460  SRETKPLTFGCGGENG------------GNF----------KQKLYVAAMRPIPHTRRHK 497

Query: 543  ILSFPVISEADKSNGGQLKANSLPFPVPKPKPLGSGPFMHQKSLPNSYQAQQIISLNPLP 722
            +L F    EA++ +G Q K  SLP P PK   +G  P  H+KSL NSYQAQQIISLNPLP
Sbjct: 498  MLPFSGFLEAERYDGEQTKP-SLP-PPPKHSVVGPAPVTHRKSLSNSYQAQQIISLNPLP 555

Query: 723  LKKHGCGRCPIQFCSEEEFLRDVMQFLILRGHTRLVPQCGISEFPDAILNTKRLDLYNLY 902
            LKKHGCGR PIQ CSEEEFLRDVMQFLILRGH+RLVPQ G++EFPDAILN KRLDL+NLY
Sbjct: 556  LKKHGCGRSPIQACSEEEFLRDVMQFLILRGHSRLVPQGGLAEFPDAILNAKRLDLFNLY 615

Query: 903  REVVSRGGFHVGNGINWKGQVFSKMRNHTVTNKMTGVGNTLKKHYEAYLLEYELAHDDVD 1082
            REVVSRGGFHVGNGINWKGQVFSKMRNHT+TN+MTGVGNTLK+HYE YLLEYELAHDDVD
Sbjct: 616  REVVSRGGFHVGNGINWKGQVFSKMRNHTLTNRMTGVGNTLKRHYETYLLEYELAHDDVD 675

Query: 1083 GECCLLCHSCAAGDWVNCGICGEWAHFGCDRRKGLGAFKDYAKTDGLEYICPQCSITNFS 1262
            GECCLLCHS AAGDWVNCGICGEWAHFGCDRR+GLGAFKDYAKTDGLEYICP CSI NF 
Sbjct: 676  GECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYICPHCSIANFK 735

Query: 1263 RKPKKSANGY 1292
            +K +K+ANGY
Sbjct: 736  KKSQKNANGY 745


>ref|XP_003547888.1| PREDICTED: uncharacterized protein LOC100816540 [Glycine max]
          Length = 782

 Score =  558 bits (1438), Expect = e-156
 Identities = 281/441 (63%), Positives = 339/441 (76%), Gaps = 7/441 (1%)
 Frame = +3

Query: 3    KSQLVHALPIRGESNR-SLSVPRTSASIACGSTVYEVCMKVPAWASQVLRQLATKISFRS 179
            KSQLVHA  +  E N+ ++  PR SASIACG++V+E+CMK+P WA Q+LRQLA ++S+RS
Sbjct: 340  KSQLVHA-QLNNEGNKENICEPRRSASIACGASVFEICMKLPQWALQILRQLAPEVSYRS 398

Query: 180  LAALGIATIQGSCVASFDKDDTERLLFFSTRQERDLL---QHAIPSSPPSWLRPPTPSRK 350
            L ALGIA+IQG  +ASF+KDD ERLLFF    E+D      + I SSPP WL+PP P+RK
Sbjct: 399  LVALGIASIQGLPIASFEKDDAERLLFFYQNCEKDSCTNKNNIIFSSPPGWLKPPPPTRK 458

Query: 351  RSVSQQETK--LHCVASEGKTGAADIYPDNGNGSGSFDFSDVPFLPVRKKLKVAAMRPIP 524
            R   +QE    LH     G+ G   +  +  +       S +P  P R++LKV+AMRPIP
Sbjct: 459  RCEPRQEASPGLHEGVFAGQGGVCKLNEEEKDRKIVNGIS-MPLTPARQRLKVSAMRPIP 517

Query: 525  HVLHHKILSFPVISEADKSNGGQLKANSLPFPVP-KPKPLGSGPFMHQKSLPNSYQAQQI 701
            H+  H++  F   SE D  +G Q++A  LP   P K   +GS    H+KS  ++ Q++Q+
Sbjct: 518  HIRRHRMTPFCGPSETDGFDGTQVEA-ILPLVAPTKRTSIGSTSGTHRKSFSSAAQSKQV 576

Query: 702  ISLNPLPLKKHGCGRCPIQFCSEEEFLRDVMQFLILRGHTRLVPQCGISEFPDAILNTKR 881
            ISLNPLPLKKHGCGR P+Q CSEEEFL+DVM+FLILRGH RL+PQ G++EFPDAILN KR
Sbjct: 577  ISLNPLPLKKHGCGRGPVQTCSEEEFLKDVMEFLILRGHNRLIPQGGLTEFPDAILNGKR 636

Query: 882  LDLYNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTVTNKMTGVGNTLKKHYEAYLLEYE 1061
            LDLYNLY+EVV+RGGFHVGNGINWKGQ+FSKMRN+T TN+MTGVGNTLK+HYE YLLEYE
Sbjct: 637  LDLYNLYKEVVTRGGFHVGNGINWKGQIFSKMRNYTTTNRMTGVGNTLKRHYETYLLEYE 696

Query: 1062 LAHDDVDGECCLLCHSCAAGDWVNCGICGEWAHFGCDRRKGLGAFKDYAKTDGLEYICPQ 1241
            LAHDDVDGECCLLCHS AAGDWVNCGICGEWAHFGCDRR+GLGAFKDYAKTDGLEYICP 
Sbjct: 697  LAHDDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYICPH 756

Query: 1242 CSITNFSRKPKKSANGYSQAS 1304
            CS+TNF +K +  ANGYSQ S
Sbjct: 757  CSVTNFKKK-QNVANGYSQGS 776


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