BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019843
         (973 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                192   1e-46
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              178   2e-42
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   172   1e-40
emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera]   169   9e-40
emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]   168   2e-39

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  192 bits (488), Expect = 1e-46
 Identities = 107/324 (33%), Positives = 181/324 (55%), Gaps = 10/324 (3%)
 Frame = +2

Query: 11   NIANFVPMKLTKDNYLLWRQVFLPILYSNNFDRYIDGSEICPVKYICDSRGNPTATVNPK 190
            N+A  VP KL + NY+ WR +F+P+L        ++G ++CP  ++ D  G  T   N  
Sbjct: 269  NVAGMVPTKLNRQNYITWRSLFIPVLKRFKLIGLVNGEDLCPPPFVRDPSG--TCVPNAS 326

Query: 191  YLQWMKQDQTILIWMHATMSESVLPYIIGVKTSQDLWIMMEK*FANISRSHITQLRQRLE 370
            +  W ++DQ ++IW+++T+S+ +LP  IG++ S+ LW  +E+ F+  SR+H+  LR +++
Sbjct: 327  FETWCERDQILMIWINSTLSKDLLPLTIGMEDSRSLWQSLERRFSGASRTHVHSLRSKIQ 386

Query: 371  NTNKGNMSMTDYLQKYKEISDSLAAAGTIVNDADIVHYVLRGLPTEYDSFSTSIRLRRED 550
              +KG+ SMTD+L   KEIS+ LAAAG  ++++D+V Y+L GLP EY+SF  SI  R E 
Sbjct: 387  TIHKGDSSMTDFLNSIKEISNKLAAAGEPLSESDLVAYILSGLPDEYESFVDSIETRNES 446

Query: 551  TSFDELHGPLLSEEINITERQKALLESSSQAFAVQR*HTYDQGSNSYTKSYGPQSNXXXX 730
             + DELHG LLS+EI++ +R+     SS+  F     H Y   S+++   +  + N    
Sbjct: 447  VTADELHGLLLSKEISLQKRKTRASSSSNAPF-----HAYAAQSSTHVGHFN-KGNSRGR 500

Query: 731  XXXXXXXXFSTNRGSYTQSDYTTN----------TQKTCDLTVNPTGRIQCQICGRVGHS 880
                     + N G     ++  N          +++    + +    +QCQ+C + GH 
Sbjct: 501  FHNRNRYTQNRNFGGNKPHNWHANNSGGILGAGPSRQPAGPSSSSGCSVQCQLCLQYGHW 560

Query: 881  AIDCYNRMNHSYQGKQAPSKLQAI 952
            A  C NR++   Q  Q+P+ + A+
Sbjct: 561  APMC-NRLSQFAQ-SQSPTAMSAM 582


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score =  178 bits (452), Expect = 2e-42
 Identities = 108/332 (32%), Positives = 173/332 (52%), Gaps = 15/332 (4%)
 Frame = +2

Query: 2   NSINIANFVPMKLTKDNYLLWRQVFLPILYSNNFDRYIDGSEICPVKYICDSRGNPTATV 181
           N+ +++NF+ +KL + NY LW     PIL S     ++DG+ +CP  ++ D  G  T  V
Sbjct: 9   NTPSVSNFLTIKLDRTNYPLWLAQITPILKSRKLWGFVDGTNLCPPCFLKDKAGQLTDQV 68

Query: 182 NPKYLQWMKQDQTILIWMHATMSESVLPYIIGVKTSQDLWIMMEK*FANISRSHITQLRQ 361
           NP +  W+ QDQ +L W++ +++  VL  +    +    W  +   FA+ S+  + QLR 
Sbjct: 69  NPDFEPWILQDQMVLSWINGSLTPKVLSTVARSTSLHATWTALATRFASQSQHRVLQLRA 128

Query: 362 RLENTNKGNMSMTDYLQKYKEISDSLAAAGTIVNDADIVHYVLRGLPTEYDSFSTSIRLR 541
            L  T +G MS++DYL K   I+D+LA AG+ V DAD+V+ V+  +   Y++  +S + R
Sbjct: 129 DLLRTTRGTMSISDYLDKLNSIADNLALAGSPVPDADLVNIVMTNVGPLYETTVSSAQAR 188

Query: 542 REDTSFDELHGPLLSEEINITE-RQKALLESSSQAFAVQR*HTYDQGSNSYTKSYG--PQ 712
               +++ L   LLS E  ++E    A  E      A Q   +  +G NS+    G   +
Sbjct: 189 DSPITYEALEVLLLSAERRVSEYAHPAAAEGIHALHATQ---SRGRGRNSFISGRGGSNR 245

Query: 713 SNXXXXXXXXXXXXFSTNRGSYTQSDYTTNTQKTCDLTVNP------------TGRIQCQ 856
                          S  RG+++ S  ++ ++++  L   P            TGRIQCQ
Sbjct: 246 GGSYSHGITNSGSAHSRGRGTFSHSRGSSGSRRSSILGPAPGTTTSNGNSFFNTGRIQCQ 305

Query: 857 ICGRVGHSAIDCYNRMNHSYQGKQAPSKLQAI 952
           IC R GHSAIDC+NR+N SY+G+   S+L A+
Sbjct: 306 ICSRPGHSAIDCFNRLNLSYEGRVPSSRLNAM 337


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  172 bits (436), Expect = 1e-40
 Identities = 100/303 (33%), Positives = 167/303 (55%), Gaps = 2/303 (0%)
 Frame = +2

Query: 26  VPMKLTKDNYLLWRQVFLPILYSNNFDRYIDGSEICPVKYICDSRGNPTATVNPKYLQWM 205
           +P+KL + NY+LWR     ++++N F+ +IDG+ ICP K +          +NP ++ W 
Sbjct: 36  LPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSICPEKDLSPG------VMNPAFVAWR 89

Query: 206 KQDQTILIWMHATMSESVLPYIIGVKTSQDLWIMMEK*FANISRSHITQLRQRLENTNKG 385
           +QD+TIL W++++++  ++  IIG  TS   W  +E  F++ SR+ I QLR  L++T KG
Sbjct: 90  RQDRTILSWIYSSLTPGIMAQIIGHNTSHSAWNALESIFSSSSRARIMQLRLELQSTKKG 149

Query: 386 NMSMTDYLQKYKEISDSLAAAGTIVNDADIVHYVLRGLPTEYDSFSTSIRLRREDTSFDE 565
           +MSM DY+ K K  +D+LAA G  V++ D V  +L GL ++Y++  T+I +R +  S + 
Sbjct: 150 SMSMIDYIMKIKGAADNLAAIGEPVSEQDQVMNLLGGLGSDYNAVVTAINIRDDKISLEA 209

Query: 566 LHGPLLSEEINITERQKALLESSSQAFAVQR*HTYDQGSNSYTKSYGPQSNXXXXXXXXX 745
           +H  LL+ E  +   Q++ +E  S  +A          S+S  +  G + N         
Sbjct: 210 IHSMLLAFEHRL--EQQSSIEQMSANYA----------SSSNNRGGGRKFN------GGR 251

Query: 746 XXXFSTNRGSYTQSDYTTNTQKTCDLTVN--PTGRIQCQICGRVGHSAIDCYNRMNHSYQ 919
              +S N  +YT        +       N  P+ + QCQ+CG+ GH+A  CY+R + S+Q
Sbjct: 252 GQGYSPNNNNYTYRGRGRGGRNGQGGRQNSSPSEKPQCQLCGKFGHTAQICYHRFDISFQ 311

Query: 920 GKQ 928
           G Q
Sbjct: 312 GGQ 314


>emb|CAN69851.1| hypothetical protein VITISV_009554 [Vitis vinifera]
          Length = 1282

 Score =  169 bits (428), Expect = 9e-40
 Identities = 98/302 (32%), Positives = 165/302 (54%)
 Frame = +2

Query: 26  VPMKLTKDNYLLWRQVFLPILYSNNFDRYIDGSEICPVKYICDSRGNPTATVNPKYLQWM 205
           +P+KL + NY+LW+     ++++N F+ +IDGS ICP K +       +  +NP ++ W 
Sbjct: 33  LPVKLDRTNYILWKSQIDNVVFANGFEDFIDGSSICPDKELX------SGLINPAFVAWR 86

Query: 206 KQDQTILIWMHATMSESVLPYIIGVKTSQDLWIMMEK*FANISRSHITQLRQRLENTNKG 385
           +QD+TIL W++++++ + +  IIG  +    W  +EK F++ SR+ I QLR  L++T KG
Sbjct: 87  RQDRTILSWLYSSLTPAXMAQIIGHNSXHSAWNALEKTFSSSSRARIMQLRLELQSTKKG 146

Query: 386 NMSMTDYLQKYKEISDSLAAAGTIVNDADIVHYVLRGLPTEYDSFSTSIRLRREDTSFDE 565
           + SM DY+ K K  +DSLAA G  V++ D V  +L GL ++Y++  T+I +R +  S + 
Sbjct: 147 SXSMIDYIMKVKGAADSLAAIGEPVSEQDQVMNLLDGLGSDYNAVVTAINIRDDKISIEA 206

Query: 566 LHGPLLSEEINITERQKALLESSSQAFAVQR*HTYDQGSNSYTKSYGPQSNXXXXXXXXX 745
           +H  LL  E  +   Q++ +E  S   A       +  S+S ++  G + N         
Sbjct: 207 VHSMLLVFEHRL--EQQSSIEQFSPISA-------NYASSSNSRGGGRRYNGGRGQNHTP 257

Query: 746 XXXFSTNRGSYTQSDYTTNTQKTCDLTVNPTGRIQCQICGRVGHSAIDCYNRMNHSYQGK 925
                T RGS     Y  N +   + +  P    QCQ+CG+ G++   CY+R + SYQ  
Sbjct: 258 NTSNYTYRGSGRGGRYGQNERHNSNSSEKP----QCQLCGKFGYTVQICYHRFDISYQSS 313

Query: 926 QA 931
           Q+
Sbjct: 314 QS 315


>emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]
          Length = 2220

 Score =  168 bits (425), Expect = 2e-39
 Identities = 96/300 (32%), Positives = 165/300 (55%)
 Frame = +2

Query: 32   MKLTKDNYLLWRQVFLPILYSNNFDRYIDGSEICPVKYICDSRGNPTATVNPKYLQWMKQ 211
            +KL + NY+LW+     ++++N F+ +IDG  ICP K +       +  +NP ++ W +Q
Sbjct: 880  VKLDRTNYILWKSQIDNVVFANGFEDFIDGFSICPDKELS------SGLINPAFVAWRRQ 933

Query: 212  DQTILIWMHATMSESVLPYIIGVKTSQDLWIMMEK*FANISRSHITQLRQRLENTNKGNM 391
            D+TIL W++++++ +++  IIG  +S   W  +EK F++ SR+ I QLR  L++T KG++
Sbjct: 934  DRTILSWLYSSLTPAIMAQIIGHNSSHSAWNALEKTFSSSSRARIMQLRLELQSTKKGSL 993

Query: 392  SMTDYLQKYKEISDSLAAAGTIVNDADIVHYVLRGLPTEYDSFSTSIRLRREDTSFDELH 571
            SM DY+ K K  +DSLAA G  V++ D V  +L GL ++Y++  T+I +R +  S + +H
Sbjct: 994  SMIDYIMKVKGAADSLAAIGEPVSEQDQVMNLLGGLGSDYNAVVTAINIRDDKISIEAVH 1053

Query: 572  GPLLSEEINITERQKALLESSSQAFAVQR*HTYDQGSNSYTKSYGPQSNXXXXXXXXXXX 751
              LL+ E  + E+Q ++ + S          + +  S+S  +  G + N           
Sbjct: 1054 SMLLAFEHRL-EQQSSIKQFSP--------ISANYASSSNNRGGGRRYNGGRGQNHTPNI 1104

Query: 752  XFSTNRGSYTQSDYTTNTQKTCDLTVNPTGRIQCQICGRVGHSAIDCYNRMNHSYQGKQA 931
               T RG      Y  N +   + +  P    QCQ+CG+ GH+   CY+R + SYQ  Q+
Sbjct: 1105 SNYTYRGCGRGGRYGQNGRHNSNSSEKP----QCQLCGKFGHTVQICYHRFDISYQSSQS 1160