BLASTX nr result

ID: Coptis25_contig00019839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019839
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318063.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002278135.1| PREDICTED: putative disease resistance prote...    58   9e-07
emb|CAN62186.1| hypothetical protein VITISV_003708 [Vitis vinifera]    58   9e-07
ref|XP_003633827.1| PREDICTED: disease resistance protein RPM1-l...    56   4e-06
ref|XP_003633825.1| PREDICTED: disease resistance protein RPM1-l...    55   6e-06

>ref|XP_002318063.1| predicted protein [Populus trichocarpa] gi|222858736|gb|EEE96283.1|
           predicted protein [Populus trichocarpa]
          Length = 583

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/95 (34%), Positives = 55/95 (57%)
 Frame = +2

Query: 2   LKSVLLEENQKISSLEDQTQILISLLDEIGGFFESTDGTTGKNCELETRWFRELIDIVYN 181
           L+S+LL E +  + LEDQ +++   + EIG F+     T G      +RW  EL ++  +
Sbjct: 13  LESLLLRETETFTGLEDQMKMVKGTIKEIGCFYGDRGNTEGNAAF--SRWETELKNLFDD 70

Query: 182 MEDCIDNFVVHMENQSASDQTILIDQCKIELENLE 286
           ++D +D FV+ M+ Q  SD+  LID  + EL+ +E
Sbjct: 71  LDDHVDEFVIQMDQQQGSDRLGLIDCFRAELQKIE 105


>ref|XP_002278135.1| PREDICTED: putative disease resistance protein At1g58400-like
           [Vitis vinifera]
          Length = 653

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/92 (30%), Positives = 51/92 (55%)
 Frame = +2

Query: 2   LKSVLLEENQKISSLEDQTQILISLLDEIGGFFESTDGTTGKNCELETRWFRELIDIVYN 181
           L S+L++E +  S  ED+   ++ +L EIG F  S +  + +  +    W  EL  I+  
Sbjct: 13  LDSLLVQEAESFSGFEDEVLRIMGILREIGSF--SAESGSAEEIDAVHSWVHELKGIINE 70

Query: 182 MEDCIDNFVVHMENQSASDQTILIDQCKIELE 277
           ++D +D F++ M+  + SDQ + ID  + EL+
Sbjct: 71  LDDSVDEFIIQMDAHNGSDQKVWIDSFRSELQ 102


>emb|CAN62186.1| hypothetical protein VITISV_003708 [Vitis vinifera]
          Length = 653

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/92 (30%), Positives = 51/92 (55%)
 Frame = +2

Query: 2   LKSVLLEENQKISSLEDQTQILISLLDEIGGFFESTDGTTGKNCELETRWFRELIDIVYN 181
           L S+L++E +  S  ED+   ++ +L EIG F  S +  + +  +    W  EL  I+  
Sbjct: 13  LDSLLVQEAESFSGFEDEVLRIMGILREIGSF--SAESGSAEEIDAVHSWVHELKGIINE 70

Query: 182 MEDCIDNFVVHMENQSASDQTILIDQCKIELE 277
           ++D +D F++ M+  + SDQ + ID  + EL+
Sbjct: 71  LDDSVDEFIIQMDAHNGSDQKVWIDSFRSELQ 102


>ref|XP_003633827.1| PREDICTED: disease resistance protein RPM1-like [Vitis vinifera]
          Length = 590

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
 Frame = +2

Query: 2   LKSVLLEENQKISSLEDQTQILISLLDEIGGFFESTDGTTGK-NCELETRWFRELIDIVY 178
           L S+LL+EN+ +  ++DQ + LI+ LD +G F    D   G+ +C L   W  EL  ++ 
Sbjct: 13  LNSMLLQENEILLGVKDQIESLINKLDAVGSFTGDVDRILGRESCHL--TWASELRGMLC 70

Query: 179 NMEDCIDNFVVHMENQSASDQTILIDQCKIELENL 283
             ED +D+F++ +  Q+  D+   I + + EL+N+
Sbjct: 71  EAEDFVDDFIIKVYGQTEKDREDSIAEFRNELQNI 105


>ref|XP_003633825.1| PREDICTED: disease resistance protein RPM1-like [Vitis vinifera]
          Length = 690

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/94 (31%), Positives = 52/94 (55%)
 Frame = +2

Query: 2   LKSVLLEENQKISSLEDQTQILISLLDEIGGFFESTDGTTGKNCELETRWFRELIDIVYN 181
           L S+LL+EN+ +  ++DQ + LIS LD +G F    D   G+       W  EL  ++  
Sbjct: 13  LNSMLLQENEILLGVKDQIESLISKLDAVGSFTGDADRILGRE-SCHQSWASELRGMLCE 71

Query: 182 MEDCIDNFVVHMENQSASDQTILIDQCKIELENL 283
           +ED +D+F++ +  Q+  D+   I +   EL+N+
Sbjct: 72  VEDFVDDFIIKVYGQTEKDREESIAEFGNELQNI 105


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