BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019833
         (1149 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277245.1| PREDICTED: translation factor GUF1 homolog, ...   556   e-156
ref|XP_002517483.1| GTP-binding protein lepA, putative [Ricinus ...   541   e-151
ref|XP_004162590.1| PREDICTED: LOW QUALITY PROTEIN: translation ...   535   e-150
ref|XP_004148706.1| PREDICTED: translation factor GUF1 homolog, ...   535   e-150
ref|XP_003533605.1| PREDICTED: translation factor GUF1 homolog, ...   531   e-149

>ref|XP_002277245.1| PREDICTED: translation factor GUF1 homolog, mitochondrial [Vitis
            vinifera]
          Length = 681

 Score =  556 bits (1433), Expect = e-156
 Identities = 291/374 (77%), Positives = 310/374 (82%), Gaps = 20/374 (5%)
 Frame = +2

Query: 86   LTRLSKTLNQSNYLSLSSRLKWSCY-------------------YFGLLKERSFCSHPRT 208
            L   SKTL    YLSL  R + S +                   +FG     +FCS    
Sbjct: 4    LNGASKTLKSPKYLSLLCRHRSSAFSPFSPVTGCNPVKGLLGWHHFGW--SHTFCSRSLQ 61

Query: 209  NSKENNVDLSLYPTDRIRNFSIIAHVDHGKSTLADRLLELTGTIKRGLGQPQYLDKLQVE 388
            NS++++VDLS YP +RIRNFSIIAHVDHGKSTLADRLLELTGTIKRG GQPQYLDKLQVE
Sbjct: 62   NSRDSSVDLSQYPPERIRNFSIIAHVDHGKSTLADRLLELTGTIKRGHGQPQYLDKLQVE 121

Query: 389  RERGITVKAQTATMFHSHNY-GSDISDTGDPPSFLLNLIDTPGHVDFSYEVSRSLAACQG 565
            RERGITVKAQTATMFH HN+ G D++   + PSFLLNLIDTPGHVDFSYEVSRSLAACQG
Sbjct: 122  RERGITVKAQTATMFHRHNFDGPDVTIAQESPSFLLNLIDTPGHVDFSYEVSRSLAACQG 181

Query: 566  ALLVVDAAQGVQAQTVANFYLAFESNLTIIPIINKIDQPTADPDRIKAQLKSMFDLDPED 745
             LLVVDAAQGVQAQTVANFYLAFESNLTIIP+INKIDQPTADPD +KAQLKSMFDL+P D
Sbjct: 182  VLLVVDAAQGVQAQTVANFYLAFESNLTIIPVINKIDQPTADPDHVKAQLKSMFDLNPSD 241

Query: 746  ALLTSAKTGQGLEHVLPAVIERIPPPPGKSSLPLRMLLLDSYYDEYKGVICHVAVVDGAL 925
            ALLTSAKTGQGLE VLPAVIERIPPPPGKS  PLRMLLLDSYYDEYKGVICHVAVVDGAL
Sbjct: 242  ALLTSAKTGQGLEQVLPAVIERIPPPPGKSCSPLRMLLLDSYYDEYKGVICHVAVVDGAL 301

Query: 926  QKGAKISSVATGQTYEVLDVGFMHPELKSTGVLFTGQVGYIVTGMRSTKEARVGDTLFHN 1105
            +KG KISS ATG TYEV DVG MHPELKSTGVL TGQVGY+V+GMRSTKEARVGDTL HN
Sbjct: 302  RKGDKISSSATGHTYEVFDVGIMHPELKSTGVLLTGQVGYVVSGMRSTKEARVGDTLHHN 361

Query: 1106 KCIVEPLPGFKPAK 1147
            K IVEPLPGFKPAK
Sbjct: 362  KSIVEPLPGFKPAK 375


>ref|XP_002517483.1| GTP-binding protein lepA, putative [Ricinus communis]
            gi|317411652|sp|B9RUN8.1|GUF1_RICCO RecName:
            Full=Translation factor GUF1 homolog, mitochondrial;
            AltName: Full=Elongation factor 4 homolog; Short=EF-4;
            AltName: Full=GTPase GUF1 homolog; AltName:
            Full=Ribosomal back-translocase; Flags: Precursor
            gi|223543494|gb|EEF45025.1| GTP-binding protein lepA,
            putative [Ricinus communis]
          Length = 673

 Score =  541 bits (1394), Expect = e-151
 Identities = 282/363 (77%), Positives = 310/363 (85%), Gaps = 12/363 (3%)
 Frame = +2

Query: 95   LSKTLNQSNYLSL--SSRLKWSCY---------YFGLLKERSFCSHPRTNSKENNVDLSL 241
            +SKTL     LSL  S   K++ Y          FGL+K   +CS+ R  +  N +DLS 
Sbjct: 7    VSKTLKSPKSLSLLRSYYSKFNPYPSIFGLNDHRFGLIKH-DYCSNTRKENI-NPIDLSK 64

Query: 242  YPTDRIRNFSIIAHVDHGKSTLADRLLELTGTIKRGLGQPQYLDKLQVERERGITVKAQT 421
            YPT+RIRNFSIIAHVDHGKSTLADRLLELTGTIKRG GQPQYLDKLQVERERGITVKAQT
Sbjct: 65   YPTERIRNFSIIAHVDHGKSTLADRLLELTGTIKRGHGQPQYLDKLQVERERGITVKAQT 124

Query: 422  ATMFHSHNY-GSDISDTGDPPSFLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQGV 598
            ATMFH +N+ G +I D  +PP+FLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQGV
Sbjct: 125  ATMFHKYNFHGPNIGDAHEPPTFLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQGV 184

Query: 599  QAQTVANFYLAFESNLTIIPIINKIDQPTADPDRIKAQLKSMFDLDPEDALLTSAKTGQG 778
            QAQTVANFYLAFESNLT+IP+INKIDQPTADPDR+KAQLKSMFDL+P D LLTSAKTGQG
Sbjct: 185  QAQTVANFYLAFESNLTVIPVINKIDQPTADPDRVKAQLKSMFDLEPSDCLLTSAKTGQG 244

Query: 779  LEHVLPAVIERIPPPPGKSSLPLRMLLLDSYYDEYKGVICHVAVVDGALQKGAKISSVAT 958
            LE VLPAVIERIP PPG S+ PLRMLLLDSYYDEYKGVICHVAVVDG L+KG KISS AT
Sbjct: 245  LEQVLPAVIERIPSPPGYSNSPLRMLLLDSYYDEYKGVICHVAVVDGMLRKGDKISSAAT 304

Query: 959  GQTYEVLDVGFMHPELKSTGVLFTGQVGYIVTGMRSTKEARVGDTLFHNKCIVEPLPGFK 1138
            G +YE+LDVGFMHPEL  TG+L TGQVGY+V+GMRSTKEARVGDTL+H++  VEPLPGFK
Sbjct: 305  GHSYEILDVGFMHPELTPTGILLTGQVGYVVSGMRSTKEARVGDTLYHSRTSVEPLPGFK 364

Query: 1139 PAK 1147
            PAK
Sbjct: 365  PAK 367


>ref|XP_004162590.1| PREDICTED: LOW QUALITY PROTEIN: translation factor GUF1 homolog,
            mitochondrial-like [Cucumis sativus]
          Length = 766

 Score =  535 bits (1378), Expect = e-150
 Identities = 268/322 (83%), Positives = 288/322 (89%)
 Frame = +2

Query: 182  RSFCSHPRTNSKENNVDLSLYPTDRIRNFSIIAHVDHGKSTLADRLLELTGTIKRGLGQP 361
            +SFCS  R N KE  +DL+ YP +RIRNFSIIAHVDHGKSTLADRLLELTGTIKRG GQP
Sbjct: 141  QSFCSPSRQNLKEAGIDLTQYPPERIRNFSIIAHVDHGKSTLADRLLELTGTIKRGHGQP 200

Query: 362  QYLDKLQVERERGITVKAQTATMFHSHNYGSDISDTGDPPSFLLNLIDTPGHVDFSYEVS 541
            QYLDKLQVERERGITVKAQTATMFH  N   D  +T + P FL+NLIDTPGHVDFSYEVS
Sbjct: 201  QYLDKLQVERERGITVKAQTATMFHKCNLVGD--NTSEQPPFLINLIDTPGHVDFSYEVS 258

Query: 542  RSLAACQGALLVVDAAQGVQAQTVANFYLAFESNLTIIPIINKIDQPTADPDRIKAQLKS 721
            RSLAACQGALLVVDAAQGVQAQTVANFYLAFESNLT+IP+INKIDQPTADPDR+KAQLKS
Sbjct: 259  RSLAACQGALLVVDAAQGVQAQTVANFYLAFESNLTVIPVINKIDQPTADPDRVKAQLKS 318

Query: 722  MFDLDPEDALLTSAKTGQGLEHVLPAVIERIPPPPGKSSLPLRMLLLDSYYDEYKGVICH 901
            MFDL+P  ALLTSAKTGQGLE VLPA+IERIPPPPGKS+ PLRMLLLDSYYDEYKGVICH
Sbjct: 319  MFDLEPTHALLTSAKTGQGLEQVLPAIIERIPPPPGKSTSPLRMLLLDSYYDEYKGVICH 378

Query: 902  VAVVDGALQKGAKISSVATGQTYEVLDVGFMHPELKSTGVLFTGQVGYIVTGMRSTKEAR 1081
            VAVVDG L+KG KISS ATGQ YEVLDVG MHPEL STG+L TGQVGY+V+GMRSTKEAR
Sbjct: 379  VAVVDGVLRKGDKISSAATGQAYEVLDVGIMHPELTSTGILLTGQVGYVVSGMRSTKEAR 438

Query: 1082 VGDTLFHNKCIVEPLPGFKPAK 1147
            +GDTL  +K +VEPLPGFKP K
Sbjct: 439  IGDTLHQSKTVVEPLPGFKPVK 460


>ref|XP_004148706.1| PREDICTED: translation factor GUF1 homolog, mitochondrial-like
            [Cucumis sativus]
          Length = 766

 Score =  535 bits (1378), Expect = e-150
 Identities = 268/322 (83%), Positives = 288/322 (89%)
 Frame = +2

Query: 182  RSFCSHPRTNSKENNVDLSLYPTDRIRNFSIIAHVDHGKSTLADRLLELTGTIKRGLGQP 361
            +SFCS  R N KE  +DL+ YP +RIRNFSIIAHVDHGKSTLADRLLELTGTIKRG GQP
Sbjct: 141  QSFCSPSRQNLKEAGIDLTQYPPERIRNFSIIAHVDHGKSTLADRLLELTGTIKRGHGQP 200

Query: 362  QYLDKLQVERERGITVKAQTATMFHSHNYGSDISDTGDPPSFLLNLIDTPGHVDFSYEVS 541
            QYLDKLQVERERGITVKAQTATMFH  N   D  +T + P FL+NLIDTPGHVDFSYEVS
Sbjct: 201  QYLDKLQVERERGITVKAQTATMFHKCNLVGD--NTSEQPPFLINLIDTPGHVDFSYEVS 258

Query: 542  RSLAACQGALLVVDAAQGVQAQTVANFYLAFESNLTIIPIINKIDQPTADPDRIKAQLKS 721
            RSLAACQGALLVVDAAQGVQAQTVANFYLAFESNLT+IP+INKIDQPTADPDR+KAQLKS
Sbjct: 259  RSLAACQGALLVVDAAQGVQAQTVANFYLAFESNLTVIPVINKIDQPTADPDRVKAQLKS 318

Query: 722  MFDLDPEDALLTSAKTGQGLEHVLPAVIERIPPPPGKSSLPLRMLLLDSYYDEYKGVICH 901
            MFDL+P  ALLTSAKTGQGLE VLPA+IERIPPPPGKS+ PLRMLLLDSYYDEYKGVICH
Sbjct: 319  MFDLEPTHALLTSAKTGQGLEQVLPAIIERIPPPPGKSTSPLRMLLLDSYYDEYKGVICH 378

Query: 902  VAVVDGALQKGAKISSVATGQTYEVLDVGFMHPELKSTGVLFTGQVGYIVTGMRSTKEAR 1081
            VAVVDG L+KG KISS ATGQ YEVLDVG MHPEL STG+L TGQVGY+V+GMRSTKEAR
Sbjct: 379  VAVVDGVLRKGDKISSAATGQAYEVLDVGIMHPELTSTGILLTGQVGYVVSGMRSTKEAR 438

Query: 1082 VGDTLFHNKCIVEPLPGFKPAK 1147
            +GDTL  +K +VEPLPGFKP K
Sbjct: 439  IGDTLHQSKTVVEPLPGFKPVK 460


>ref|XP_003533605.1| PREDICTED: translation factor GUF1 homolog, mitochondrial-like
            [Glycine max]
          Length = 675

 Score =  531 bits (1369), Expect = e-149
 Identities = 273/366 (74%), Positives = 304/366 (83%), Gaps = 12/366 (3%)
 Frame = +2

Query: 86   LTRLSKTLNQSNYLSL--SSRLKWSCYYFGLLKERS------FCSHPRTNS---KENNVD 232
            L++ SKTL QSNYLSL  +S   ++     +  ER        CS  R NS   +++ +D
Sbjct: 4    LSKASKTLRQSNYLSLLCNSNFNFNPLTNRITHERFSVTRALLCSQTRQNSTTREKSTID 63

Query: 233  LSLYPTDRIRNFSIIAHVDHGKSTLADRLLELTGTIKRGLGQPQYLDKLQVERERGITVK 412
            LS YP + +RNFSIIAHVDHGKSTLADRLLELTGTIK+G GQPQYLDKLQVERERGITVK
Sbjct: 64   LSQYPKELVRNFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVK 123

Query: 413  AQTATMFHSHNY-GSDISDTGDPPSFLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAA 589
            AQTATMF+ H   G D SD  + P FLLNLIDTPGHVDFSYEVSRSLAACQG LLVVDAA
Sbjct: 124  AQTATMFYKHGVNGDDCSDGKESPKFLLNLIDTPGHVDFSYEVSRSLAACQGVLLVVDAA 183

Query: 590  QGVQAQTVANFYLAFESNLTIIPIINKIDQPTADPDRIKAQLKSMFDLDPEDALLTSAKT 769
            QGVQAQTVANFYLAFESNLTI+P+INKIDQPTADPDR+KAQLKSMFDLDP D LLTSAKT
Sbjct: 184  QGVQAQTVANFYLAFESNLTIVPVINKIDQPTADPDRVKAQLKSMFDLDPSDVLLTSAKT 243

Query: 770  GQGLEHVLPAVIERIPPPPGKSSLPLRMLLLDSYYDEYKGVICHVAVVDGALQKGAKISS 949
            G+GL+ +LPAVIERIP PPG+S  PLRMLLLDSYYDEYKGVICHVAVVDG L+KG KISS
Sbjct: 244  GEGLQQILPAVIERIPAPPGRSDSPLRMLLLDSYYDEYKGVICHVAVVDGVLRKGDKISS 303

Query: 950  VATGQTYEVLDVGFMHPELKSTGVLFTGQVGYIVTGMRSTKEARVGDTLFHNKCIVEPLP 1129
             ATGQ+YE  D+G MHPEL  TG+L TGQVGY+V+GMRSTKEARVGDT++H +  VEPLP
Sbjct: 304  AATGQSYEASDIGIMHPELTPTGILLTGQVGYVVSGMRSTKEARVGDTIYHTRSTVEPLP 363

Query: 1130 GFKPAK 1147
            GFKPAK
Sbjct: 364  GFKPAK 369