BLASTX nr result
ID: Coptis25_contig00019832
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00019832
(817 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation... 109 3e-32
emb|CBI29961.3| unnamed protein product [Vitis vinifera] 109 3e-32
emb|CAN81874.1| hypothetical protein VITISV_038366 [Vitis vinifera] 109 4e-31
ref|XP_003525194.1| PREDICTED: eukaryotic translation initiation... 107 1e-30
ref|XP_002323353.1| predicted protein [Populus trichocarpa] gi|2... 103 1e-30
>ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
[Vitis vinifera]
Length = 946
Score = 109 bits (272), Expect(3) = 3e-32
Identities = 75/191 (39%), Positives = 102/191 (53%), Gaps = 31/191 (16%)
Frame = -3
Query: 686 KGKSISK-FHKLLEESQRPTFTPSPENVFDCIMAASRALSKGDFQKSFNVIKSFSFWRFV 510
K K ISK F +LLE S+R TFT PENV D +MAA+RALSKGDFQK+F+VIKS FW+ +
Sbjct: 658 KRKVISKTFRRLLEVSERQTFTGPPENVRDHVMAATRALSKGDFQKAFDVIKSLDFWKLL 717
Query: 509 ENQDYVLEMLKTKIKDEALRIGLFT*SPCY------------------------------ 420
N++ VLEML+ KIK+EALR LFT S Y
Sbjct: 718 RNREDVLEMLRAKIKEEALRTYLFTYSLSYNTLSLDQLTKMFDLSETLTHSIISKMMVME 777
Query: 419 IVHRTWTS*PPRSTYPEITEPSVTKLPTLAS*MTKKLSIFEESYWKVFEAQT*RLGWNAP 240
+H +W + ++ T+L L+ +T KL+I E+ + +EA+ G + P
Sbjct: 778 ELHASWDQPTRCIVFHDVEH---TRLQALSFQLTDKLTILAENNERAYEAKIGGGGLDLP 834
Query: 239 MSYSKVQDSAG 207
+ QD AG
Sbjct: 835 LRRRDGQDYAG 845
Score = 44.3 bits (103), Expect(3) = 3e-32
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -2
Query: 762 LLDAVHLVCAMLLEVPNIAVKTGDAEGKV 676
LL+ VHL+CAMLLEVPN+A T DA+ KV
Sbjct: 633 LLEGVHLICAMLLEVPNMAANTHDAKRKV 661
Score = 32.0 bits (71), Expect(3) = 3e-32
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 817 TQKQEIMEGRRQMPYHMH 764
T +QE +E RRQMPYHMH
Sbjct: 611 TPEQERIERRRQMPYHMH 628
>emb|CBI29961.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 109 bits (272), Expect(3) = 3e-32
Identities = 75/191 (39%), Positives = 102/191 (53%), Gaps = 31/191 (16%)
Frame = -3
Query: 686 KGKSISK-FHKLLEESQRPTFTPSPENVFDCIMAASRALSKGDFQKSFNVIKSFSFWRFV 510
K K ISK F +LLE S+R TFT PENV D +MAA+RALSKGDFQK+F+VIKS FW+ +
Sbjct: 578 KRKVISKTFRRLLEVSERQTFTGPPENVRDHVMAATRALSKGDFQKAFDVIKSLDFWKLL 637
Query: 509 ENQDYVLEMLKTKIKDEALRIGLFT*SPCY------------------------------ 420
N++ VLEML+ KIK+EALR LFT S Y
Sbjct: 638 RNREDVLEMLRAKIKEEALRTYLFTYSLSYNTLSLDQLTKMFDLSETLTHSIISKMMVME 697
Query: 419 IVHRTWTS*PPRSTYPEITEPSVTKLPTLAS*MTKKLSIFEESYWKVFEAQT*RLGWNAP 240
+H +W + ++ T+L L+ +T KL+I E+ + +EA+ G + P
Sbjct: 698 ELHASWDQPTRCIVFHDVEH---TRLQALSFQLTDKLTILAENNERAYEAKIGGGGLDLP 754
Query: 239 MSYSKVQDSAG 207
+ QD AG
Sbjct: 755 LRRRDGQDYAG 765
Score = 44.3 bits (103), Expect(3) = 3e-32
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -2
Query: 762 LLDAVHLVCAMLLEVPNIAVKTGDAEGKV 676
LL+ VHL+CAMLLEVPN+A T DA+ KV
Sbjct: 553 LLEGVHLICAMLLEVPNMAANTHDAKRKV 581
Score = 32.0 bits (71), Expect(3) = 3e-32
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 817 TQKQEIMEGRRQMPYHMH 764
T +QE +E RRQMPYHMH
Sbjct: 531 TPEQERIERRRQMPYHMH 548
>emb|CAN81874.1| hypothetical protein VITISV_038366 [Vitis vinifera]
Length = 1047
Score = 109 bits (272), Expect(3) = 4e-31
Identities = 75/191 (39%), Positives = 102/191 (53%), Gaps = 31/191 (16%)
Frame = -3
Query: 686 KGKSISK-FHKLLEESQRPTFTPSPENVFDCIMAASRALSKGDFQKSFNVIKSFSFWRFV 510
K K ISK F +LLE S+R TFT PENV D +MAA+RALSKGDFQK+F+VIKS FW+ +
Sbjct: 657 KRKVISKTFRRLLEVSERQTFTGPPENVRDHVMAATRALSKGDFQKAFDVIKSLDFWKLL 716
Query: 509 ENQDYVLEMLKTKIKDEALRIGLFT*SPCY------------------------------ 420
N++ VLEML+ KIK+EALR LFT S Y
Sbjct: 717 RNREDVLEMLRAKIKEEALRTYLFTYSLSYNTLSLDQLTKMFDLSETLTHSIISKMMVME 776
Query: 419 IVHRTWTS*PPRSTYPEITEPSVTKLPTLAS*MTKKLSIFEESYWKVFEAQT*RLGWNAP 240
+H +W + ++ T+L L+ +T KL+I E+ + +EA+ G + P
Sbjct: 777 ELHASWDQPTRCIVFHDVEH---TRLQALSFQLTDKLTILAENNERAYEAKIGGGGLDLP 833
Query: 239 MSYSKVQDSAG 207
+ QD AG
Sbjct: 834 LRRRDGQDYAG 844
Score = 44.3 bits (103), Expect(3) = 4e-31
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -2
Query: 762 LLDAVHLVCAMLLEVPNIAVKTGDAEGKV 676
LL+ VHL+CAMLLEVPN+A T DA+ KV
Sbjct: 632 LLEGVHLICAMLLEVPNMAANTHDAKRKV 660
Score = 28.1 bits (61), Expect(3) = 4e-31
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 805 EIMEGRRQMPYHMH 764
E +E RRQMPYHMH
Sbjct: 614 ERIERRRQMPYHMH 627
>ref|XP_003525194.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
[Glycine max]
Length = 925
Score = 107 bits (267), Expect(3) = 1e-30
Identities = 76/187 (40%), Positives = 102/187 (54%), Gaps = 28/187 (14%)
Frame = -3
Query: 686 KGKSISK-FHKLLEESQRPTFTPSPENVFDCIMAASRALSKGDFQKSFNVIKSFSFWRFV 510
K K ISK F +LLE S++ TFT PENV D +MAA+R L+KGDFQK+F++I S W+FV
Sbjct: 650 KRKVISKTFRRLLEVSEKQTFTGPPENVRDHVMAATRVLNKGDFQKAFDIIVSLDVWKFV 709
Query: 509 ENQDYVLEMLKTKIKDEALRIGLFT*SPCY---------------------IVHRTWTS* 393
N+D VLEMLK KIK+EALR LFT S Y IV R +
Sbjct: 710 RNRDTVLEMLKDKIKEEALRTYLFTFSSSYESLSLDQLTKFFDLSVCRTHSIVSRMMINE 769
Query: 392 PPRSTYPEIT------EPSVTKLPTLAS*MTKKLSIFEESYWKVFEAQT*RLGWNAPMSY 231
+++ + T + ++L LA +T+KLS+ ES K EA+ G + P+
Sbjct: 770 ELHASWDQPTGCILFQDVEHSRLQALAFQLTEKLSVLAESNEKAAEARVGGGGLDLPLRR 829
Query: 230 SKVQDSA 210
QD A
Sbjct: 830 RDGQDYA 836
Score = 40.4 bits (93), Expect(3) = 1e-30
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -2
Query: 762 LLDAVHLVCAMLLEVPNIAVKTGDAEGKV 676
LL+AVHLV AMLLEVPN+A DA+ KV
Sbjct: 625 LLEAVHLVSAMLLEVPNMAANVHDAKRKV 653
Score = 32.3 bits (72), Expect(3) = 1e-30
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 817 TQKQEIMEGRRQMPYHMH 764
T +QE +E RRQMPYHMH
Sbjct: 603 TPEQERLERRRQMPYHMH 620
>ref|XP_002323353.1| predicted protein [Populus trichocarpa] gi|222867983|gb|EEF05114.1|
predicted protein [Populus trichocarpa]
Length = 895
Score = 103 bits (256), Expect(3) = 1e-30
Identities = 74/187 (39%), Positives = 102/187 (54%), Gaps = 28/187 (14%)
Frame = -3
Query: 686 KGKSISK-FHKLLEESQRPTFTPSPENVFDCIMAASRALSKGDFQKSFNVIKSFSFWRFV 510
K K ISK F +LLE ++R TFT PENV D +MAA+RAL+KGDFQK+F+VI S W+ +
Sbjct: 630 KRKVISKTFRRLLEVTERQTFTGPPENVRDHVMAATRALTKGDFQKAFDVINSLDVWKLL 689
Query: 509 ENQDYVLEMLKTKIKDEALRIGLFT*SPCY---------------------IVHRTWTS* 393
++D VLEMLK KIK+EALR LF+ S Y IV + +
Sbjct: 690 RDRDGVLEMLKAKIKEEALRTHLFSYSSSYDSVGLDLLSKMFDLSPIQTQIIVSKMMINE 749
Query: 392 PPRSTYPEITEPSV------TKLPTLAS*MTKKLSIFEESYWKVFEAQT*RLGWNAPMSY 231
+++ + T+ V T+L LA +T+KLSI ES + E + G + P
Sbjct: 750 ELHASWDQPTQCIVFYDIERTRLQALAFQLTEKLSILVESNERAIETRIGGGGLDLPQRR 809
Query: 230 SKVQDSA 210
+ QD A
Sbjct: 810 REGQDFA 816
Score = 42.0 bits (97), Expect(3) = 1e-30
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -2
Query: 762 LLDAVHLVCAMLLEVPNIAVKTGDAEGKV 676
LL++VHL+CAMLLEVPN+A DA+ KV
Sbjct: 605 LLESVHLICAMLLEVPNMAANIYDAKRKV 633
Score = 34.7 bits (78), Expect(3) = 1e-30
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -1
Query: 817 TQKQEIMEGRRQMPYHMH 764
TQ+QE +E RRQMPYHMH
Sbjct: 583 TQEQERLERRRQMPYHMH 600