BLASTX nr result
ID: Coptis25_contig00019818
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00019818 (1037 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002309247.1| predicted protein [Populus trichocarpa] gi|2... 54 2e-08 gb|ABK25032.1| unknown [Picea sitchensis] 56 3e-08 ref|XP_002268110.1| PREDICTED: exocyst complex component 7 [Viti... 57 9e-08 emb|CBI25018.3| unnamed protein product [Vitis vinifera] 57 9e-08 ref|XP_002864165.1| predicted protein [Arabidopsis lyrata subsp.... 52 2e-07 >ref|XP_002309247.1| predicted protein [Populus trichocarpa] gi|222855223|gb|EEE92770.1| predicted protein [Populus trichocarpa] Length = 644 Score = 53.9 bits (128), Expect(2) = 2e-08 Identities = 26/34 (76%), Positives = 30/34 (88%) Frame = -3 Query: 975 TQIRTHSNR*EHENIDKTLKASDVILGQFDLSRQ 874 TQIRTHS R HENIDKTLKA++VIL QFDL+R+ Sbjct: 52 TQIRTHSIRRAHENIDKTLKAAEVILSQFDLTRK 85 Score = 31.6 bits (70), Expect(2) = 2e-08 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = -2 Query: 1021 ETITDNMVSILGSFYH 974 +TITDNMVSILGSF H Sbjct: 25 QTITDNMVSILGSFDH 40 >gb|ABK25032.1| unknown [Picea sitchensis] Length = 647 Score = 55.8 bits (133), Expect(2) = 3e-08 Identities = 26/35 (74%), Positives = 31/35 (88%) Frame = -3 Query: 975 TQIRTHSNR*EHENIDKTLKASDVILGQFDLSRQV 871 TQ+RTH+ R HENIDKTLKA++VIL QFD+SRQV Sbjct: 52 TQVRTHAIRKAHENIDKTLKAAEVILAQFDISRQV 86 Score = 28.9 bits (63), Expect(2) = 3e-08 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = -2 Query: 1030 SQHETITDNMVSILGSFYH 974 ++ TITD MVSILGSF H Sbjct: 22 NKSRTITDGMVSILGSFDH 40 >ref|XP_002268110.1| PREDICTED: exocyst complex component 7 [Vitis vinifera] Length = 650 Score = 56.6 bits (135), Expect(2) = 9e-08 Identities = 28/38 (73%), Positives = 31/38 (81%) Frame = -3 Query: 975 TQIRTHSNR*EHENIDKTLKASDVILGQFDLSRQVTGE 862 TQIRTHS R HENIDKTLKA++VIL QFDL RQ G+ Sbjct: 52 TQIRTHSIRRAHENIDKTLKAAEVILAQFDLYRQAEGK 89 Score = 26.6 bits (57), Expect(2) = 9e-08 Identities = 11/16 (68%), Positives = 15/16 (93%) Frame = -2 Query: 1021 ETITDNMVSILGSFYH 974 +TI+D++VSILGSF H Sbjct: 25 QTISDSIVSILGSFDH 40 >emb|CBI25018.3| unnamed protein product [Vitis vinifera] Length = 644 Score = 56.6 bits (135), Expect(2) = 9e-08 Identities = 28/38 (73%), Positives = 31/38 (81%) Frame = -3 Query: 975 TQIRTHSNR*EHENIDKTLKASDVILGQFDLSRQVTGE 862 TQIRTHS R HENIDKTLKA++VIL QFDL RQ G+ Sbjct: 46 TQIRTHSIRRAHENIDKTLKAAEVILAQFDLYRQAEGK 83 Score = 26.6 bits (57), Expect(2) = 9e-08 Identities = 11/16 (68%), Positives = 15/16 (93%) Frame = -2 Query: 1021 ETITDNMVSILGSFYH 974 +TI+D++VSILGSF H Sbjct: 19 QTISDSIVSILGSFDH 34 >ref|XP_002864165.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297310000|gb|EFH40424.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 631 Score = 52.0 bits (123), Expect(2) = 2e-07 Identities = 25/34 (73%), Positives = 29/34 (85%) Frame = -3 Query: 975 TQIRTHSNR*EHENIDKTLKASDVILGQFDLSRQ 874 TQIRTHS R HENIDK LKA++VIL QFD+SR+ Sbjct: 52 TQIRTHSIRRAHENIDKALKAAEVILDQFDISRK 85 Score = 30.0 bits (66), Expect(2) = 2e-07 Identities = 13/16 (81%), Positives = 14/16 (87%) Frame = -2 Query: 1021 ETITDNMVSILGSFYH 974 +TITDNMV ILGSF H Sbjct: 25 QTITDNMVGILGSFDH 40