BLASTX nr result

ID: Coptis25_contig00019818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019818
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309247.1| predicted protein [Populus trichocarpa] gi|2...    54   2e-08
gb|ABK25032.1| unknown [Picea sitchensis]                              56   3e-08
ref|XP_002268110.1| PREDICTED: exocyst complex component 7 [Viti...    57   9e-08
emb|CBI25018.3| unnamed protein product [Vitis vinifera]               57   9e-08
ref|XP_002864165.1| predicted protein [Arabidopsis lyrata subsp....    52   2e-07

>ref|XP_002309247.1| predicted protein [Populus trichocarpa] gi|222855223|gb|EEE92770.1|
           predicted protein [Populus trichocarpa]
          Length = 644

 Score = 53.9 bits (128), Expect(2) = 2e-08
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -3

Query: 975 TQIRTHSNR*EHENIDKTLKASDVILGQFDLSRQ 874
           TQIRTHS R  HENIDKTLKA++VIL QFDL+R+
Sbjct: 52  TQIRTHSIRRAHENIDKTLKAAEVILSQFDLTRK 85



 Score = 31.6 bits (70), Expect(2) = 2e-08
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -2

Query: 1021 ETITDNMVSILGSFYH 974
            +TITDNMVSILGSF H
Sbjct: 25   QTITDNMVSILGSFDH 40


>gb|ABK25032.1| unknown [Picea sitchensis]
          Length = 647

 Score = 55.8 bits (133), Expect(2) = 3e-08
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = -3

Query: 975 TQIRTHSNR*EHENIDKTLKASDVILGQFDLSRQV 871
           TQ+RTH+ R  HENIDKTLKA++VIL QFD+SRQV
Sbjct: 52  TQVRTHAIRKAHENIDKTLKAAEVILAQFDISRQV 86



 Score = 28.9 bits (63), Expect(2) = 3e-08
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -2

Query: 1030 SQHETITDNMVSILGSFYH 974
            ++  TITD MVSILGSF H
Sbjct: 22   NKSRTITDGMVSILGSFDH 40


>ref|XP_002268110.1| PREDICTED: exocyst complex component 7 [Vitis vinifera]
          Length = 650

 Score = 56.6 bits (135), Expect(2) = 9e-08
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = -3

Query: 975 TQIRTHSNR*EHENIDKTLKASDVILGQFDLSRQVTGE 862
           TQIRTHS R  HENIDKTLKA++VIL QFDL RQ  G+
Sbjct: 52  TQIRTHSIRRAHENIDKTLKAAEVILAQFDLYRQAEGK 89



 Score = 26.6 bits (57), Expect(2) = 9e-08
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = -2

Query: 1021 ETITDNMVSILGSFYH 974
            +TI+D++VSILGSF H
Sbjct: 25   QTISDSIVSILGSFDH 40


>emb|CBI25018.3| unnamed protein product [Vitis vinifera]
          Length = 644

 Score = 56.6 bits (135), Expect(2) = 9e-08
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = -3

Query: 975 TQIRTHSNR*EHENIDKTLKASDVILGQFDLSRQVTGE 862
           TQIRTHS R  HENIDKTLKA++VIL QFDL RQ  G+
Sbjct: 46  TQIRTHSIRRAHENIDKTLKAAEVILAQFDLYRQAEGK 83



 Score = 26.6 bits (57), Expect(2) = 9e-08
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = -2

Query: 1021 ETITDNMVSILGSFYH 974
            +TI+D++VSILGSF H
Sbjct: 19   QTISDSIVSILGSFDH 34


>ref|XP_002864165.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310000|gb|EFH40424.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 631

 Score = 52.0 bits (123), Expect(2) = 2e-07
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = -3

Query: 975 TQIRTHSNR*EHENIDKTLKASDVILGQFDLSRQ 874
           TQIRTHS R  HENIDK LKA++VIL QFD+SR+
Sbjct: 52  TQIRTHSIRRAHENIDKALKAAEVILDQFDISRK 85



 Score = 30.0 bits (66), Expect(2) = 2e-07
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -2

Query: 1021 ETITDNMVSILGSFYH 974
            +TITDNMV ILGSF H
Sbjct: 25   QTITDNMVGILGSFDH 40


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