BLASTX nr result

ID: Coptis25_contig00019817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019817
         (892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEI26267.1| Exo70A1 [Brassica oleracea var. acephala]               58   1e-11
gb|ACV92697.1| exocyst subunit EXO70 A1 [Brassica napus]               58   1e-11
gb|AGC65586.1| exocyst subunit EXO70A1 [Brassica rapa subsp. chi...    58   2e-11
dbj|BAJ95107.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   5e-11
dbj|BAJ96443.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   5e-11

>gb|AEI26267.1| Exo70A1 [Brassica oleracea var. acephala]
          Length = 638

 Score = 58.2 bits (139), Expect(2) = 1e-11
 Identities = 27/42 (64%), Positives = 34/42 (80%)
 Frame = -3

Query: 713 TQIRTHSNRREHENIDKTLKASDVILGQFDLSRQVQMPVIVG 588
           TQIRTH+ R+ HENIDKTLK+++VIL QFDL RQ +  V+ G
Sbjct: 52  TQIRTHAIRKAHENIDKTLKSAEVILSQFDLLRQAETKVLKG 93



 Score = 38.1 bits (87), Expect(2) = 1e-11
 Identities = 19/31 (61%), Positives = 24/31 (77%), Gaps = 2/31 (6%)
 Frame = -1

Query: 793 ETVTDNMVSILGSFDHSLSALN--MKPQSLR 707
           +T+TDN+VSILGSFD  LSAL   M+P  +R
Sbjct: 25  QTITDNVVSILGSFDSRLSALESAMRPTQIR 55


>gb|ACV92697.1| exocyst subunit EXO70 A1 [Brassica napus]
          Length = 638

 Score = 58.2 bits (139), Expect(2) = 1e-11
 Identities = 27/42 (64%), Positives = 34/42 (80%)
 Frame = -3

Query: 713 TQIRTHSNRREHENIDKTLKASDVILGQFDLSRQVQMPVIVG 588
           TQIRTH+ R+ HENIDKTLK+++VIL QFDL RQ +  V+ G
Sbjct: 52  TQIRTHAIRKAHENIDKTLKSAEVILSQFDLLRQAETKVLKG 93



 Score = 38.1 bits (87), Expect(2) = 1e-11
 Identities = 19/31 (61%), Positives = 24/31 (77%), Gaps = 2/31 (6%)
 Frame = -1

Query: 793 ETVTDNMVSILGSFDHSLSALN--MKPQSLR 707
           +T+TDN+VSILGSFD  LSAL   M+P  +R
Sbjct: 25  QTITDNVVSILGSFDSRLSALESAMRPTQIR 55


>gb|AGC65586.1| exocyst subunit EXO70A1 [Brassica rapa subsp. chinensis]
          Length = 638

 Score = 58.2 bits (139), Expect(2) = 2e-11
 Identities = 27/42 (64%), Positives = 34/42 (80%)
 Frame = -3

Query: 713 TQIRTHSNRREHENIDKTLKASDVILGQFDLSRQVQMPVIVG 588
           TQIRTH+ R+ HENIDKTLK+++VIL QFDL RQ +  V+ G
Sbjct: 52  TQIRTHAIRKAHENIDKTLKSAEVILSQFDLLRQAETKVLKG 93



 Score = 37.0 bits (84), Expect(2) = 2e-11
 Identities = 18/31 (58%), Positives = 24/31 (77%), Gaps = 2/31 (6%)
 Frame = -1

Query: 793 ETVTDNMVSILGSFDHSLSALN--MKPQSLR 707
           +T+TDN+V+ILGSFD  LSAL   M+P  +R
Sbjct: 25  QTITDNVVTILGSFDSRLSALESAMRPTQIR 55


>dbj|BAJ95107.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 647

 Score = 58.5 bits (140), Expect(2) = 5e-11
 Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
 Frame = -3

Query: 713 TQIRTHSNRREHENIDKTLKASDVILGQFDLSRQVQMPVIVG--NDAKEKSEAPARKVGL 540
           TQ+RTH+ R  HENIDKTLKA + IL QFDL+R+ +  ++ G   D +   EA     G+
Sbjct: 55  TQVRTHAIRMAHENIDKTLKAGEAILSQFDLTRRAEATILRGPHEDLESYLEAVDILKGI 114

Query: 539 AASKSPREDVDQVGPKLSHLGGTEKSEAAKETASSNSDTETVRKHNSRDRELDTDMKKAM 360
           +   S  ++       L+H+ G     + K          T  K    DR  D  + K++
Sbjct: 115 SRFFSSNKNFRSSEGILNHVNGLLAKSSLKIEEEFKQLMSTYSKPIEPDRLFDC-LPKSL 173

Query: 359 RQS 351
           R S
Sbjct: 174 RPS 176



 Score = 35.4 bits (80), Expect(2) = 5e-11
 Identities = 18/28 (64%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
 Frame = -1

Query: 784 TDNMVSILGSFDHSLSALN--MKPQSLR 707
           TD MV+ILGSFDH LSAL   M+P  +R
Sbjct: 31  TDGMVAILGSFDHRLSALEAAMRPTQVR 58


>dbj|BAJ96443.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 615

 Score = 58.5 bits (140), Expect(2) = 5e-11
 Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
 Frame = -3

Query: 713 TQIRTHSNRREHENIDKTLKASDVILGQFDLSRQVQMPVIVG--NDAKEKSEAPARKVGL 540
           TQ+RTH+ R  HENIDKTLKA + IL QFDL+R+ +  ++ G   D +   EA     G+
Sbjct: 55  TQVRTHAIRMAHENIDKTLKAGEAILSQFDLTRRAEATILRGPHEDLESYLEAVDILKGI 114

Query: 539 AASKSPREDVDQVGPKLSHLGGTEKSEAAKETASSNSDTETVRKHNSRDRELDTDMKKAM 360
           +   S  ++       L+H+ G     + K          T  K    DR  D  + K++
Sbjct: 115 SRFFSSNKNFRSSEGILNHVNGLLAKSSLKIEEEFKQLMSTYSKPIEPDRLFDC-LPKSL 173

Query: 359 RQS 351
           R S
Sbjct: 174 RPS 176



 Score = 35.4 bits (80), Expect(2) = 5e-11
 Identities = 18/28 (64%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
 Frame = -1

Query: 784 TDNMVSILGSFDHSLSALN--MKPQSLR 707
           TD MV+ILGSFDH LSAL   M+P  +R
Sbjct: 31  TDGMVAILGSFDHRLSALEAAMRPTQVR 58


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