BLASTX nr result

ID: Coptis25_contig00019810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019810
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA55739.1| TPA: hypothetical protein ZEAMMB73_990220 [Zea m...   231   4e-59
gb|ACR34414.1| unknown [Zea mays]                                     231   4e-59
ref|NP_001142071.1| uncharacterized protein LOC100274228 [Zea ma...   231   4e-59
ref|XP_002459143.1| hypothetical protein SORBIDRAFT_03g046660 [S...   231   5e-59
ref|NP_001151343.1| LOC100284976 [Zea mays] gi|195645962|gb|ACG4...   231   5e-59

>tpg|DAA55739.1| TPA: hypothetical protein ZEAMMB73_990220 [Zea mays]
          Length = 538

 Score =  231 bits (590), Expect = 4e-59
 Identities = 113/155 (72%), Positives = 122/155 (78%)
 Frame = -2

Query: 467 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGMEGYWDPYPIDMEFRPPCIVLSTIGISK 288
           LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG++GYWDPYPIDMEFRPPC+VLSTIGISK
Sbjct: 357 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 416

Query: 287 PGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEGQSARQCSTHLHQLHVCLPSSRNKTR 108
           PG                              L+G+S RQCSTHLHQLHVCLPSSRNKTR
Sbjct: 417 PG-----------------------------KLQGKSTRQCSTHLHQLHVCLPSSRNKTR 447

Query: 107 LLYRMSLDFAPLLKYIPLMHLVWRYFAEKVLNEDL 3
           LLYRMSLDFAP LK++PLMHL+W +FAEKVLNEDL
Sbjct: 448 LLYRMSLDFAPWLKHVPLMHLLWSHFAEKVLNEDL 482


>gb|ACR34414.1| unknown [Zea mays]
          Length = 196

 Score =  231 bits (590), Expect = 4e-59
 Identities = 113/155 (72%), Positives = 122/155 (78%)
 Frame = -2

Query: 467 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGMEGYWDPYPIDMEFRPPCIVLSTIGISK 288
           LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG++GYWDPYPIDMEFRPPC+VLSTIGISK
Sbjct: 15  LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 74

Query: 287 PGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEGQSARQCSTHLHQLHVCLPSSRNKTR 108
           PG                              L+G+S RQCSTHLHQLHVCLPSSRNKTR
Sbjct: 75  PG-----------------------------KLQGKSTRQCSTHLHQLHVCLPSSRNKTR 105

Query: 107 LLYRMSLDFAPLLKYIPLMHLVWRYFAEKVLNEDL 3
           LLYRMSLDFAP LK++PLMHL+W +FAEKVLNEDL
Sbjct: 106 LLYRMSLDFAPWLKHVPLMHLLWSHFAEKVLNEDL 140


>ref|NP_001142071.1| uncharacterized protein LOC100274228 [Zea mays]
           gi|194706992|gb|ACF87580.1| unknown [Zea mays]
          Length = 440

 Score =  231 bits (590), Expect = 4e-59
 Identities = 113/155 (72%), Positives = 122/155 (78%)
 Frame = -2

Query: 467 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGMEGYWDPYPIDMEFRPPCIVLSTIGISK 288
           LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG++GYWDPYPIDMEFRPPC+VLSTIGISK
Sbjct: 259 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 318

Query: 287 PGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEGQSARQCSTHLHQLHVCLPSSRNKTR 108
           PG                              L+G+S RQCSTHLHQLHVCLPSSRNKTR
Sbjct: 319 PG-----------------------------KLQGKSTRQCSTHLHQLHVCLPSSRNKTR 349

Query: 107 LLYRMSLDFAPLLKYIPLMHLVWRYFAEKVLNEDL 3
           LLYRMSLDFAP LK++PLMHL+W +FAEKVLNEDL
Sbjct: 350 LLYRMSLDFAPWLKHVPLMHLLWSHFAEKVLNEDL 384


>ref|XP_002459143.1| hypothetical protein SORBIDRAFT_03g046660 [Sorghum bicolor]
           gi|241931118|gb|EES04263.1| hypothetical protein
           SORBIDRAFT_03g046660 [Sorghum bicolor]
          Length = 542

 Score =  231 bits (589), Expect = 5e-59
 Identities = 113/155 (72%), Positives = 122/155 (78%)
 Frame = -2

Query: 467 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGMEGYWDPYPIDMEFRPPCIVLSTIGISK 288
           LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG++GYWDPYPIDMEFRPPC+VLSTIGISK
Sbjct: 363 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 422

Query: 287 PGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEGQSARQCSTHLHQLHVCLPSSRNKTR 108
           PG                              LEG+S +QCSTHLHQLHVCLPSSRNKTR
Sbjct: 423 PG-----------------------------KLEGKSTQQCSTHLHQLHVCLPSSRNKTR 453

Query: 107 LLYRMSLDFAPLLKYIPLMHLVWRYFAEKVLNEDL 3
           LLYRMSLDFAP LK++PLMHL+W +FAEKVLNEDL
Sbjct: 454 LLYRMSLDFAPWLKHVPLMHLLWSHFAEKVLNEDL 488


>ref|NP_001151343.1| LOC100284976 [Zea mays] gi|195645962|gb|ACG42449.1| chlorophyllide
           a oxygenase [Zea mays] gi|223948119|gb|ACN28143.1|
           unknown [Zea mays] gi|413951238|gb|AFW83887.1|
           chlorophyllide a oxygenase [Zea mays]
          Length = 542

 Score =  231 bits (589), Expect = 5e-59
 Identities = 113/155 (72%), Positives = 122/155 (78%)
 Frame = -2

Query: 467 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGMEGYWDPYPIDMEFRPPCIVLSTIGISK 288
           LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG++GYWDPYPIDMEFRPPC+VLSTIGISK
Sbjct: 363 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 422

Query: 287 PGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEGQSARQCSTHLHQLHVCLPSSRNKTR 108
           PG                              LEG+S +QCSTHLHQLHVCLPSSRNKTR
Sbjct: 423 PG-----------------------------KLEGKSTQQCSTHLHQLHVCLPSSRNKTR 453

Query: 107 LLYRMSLDFAPLLKYIPLMHLVWRYFAEKVLNEDL 3
           LLYRMSLDFAP LK++PLMHL+W +FAEKVLNEDL
Sbjct: 454 LLYRMSLDFAPWLKHVPLMHLLWSHFAEKVLNEDL 488


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