BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019808
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi...   309   3e-82
ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containi...   301   5e-80
ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi...   291   6e-77
ref|XP_002322810.1| predicted protein [Populus trichocarpa] gi|2...   286   2e-75
ref|XP_002879907.1| pentatricopeptide repeat-containing protein ...   280   2e-73

>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
            [Vitis vinifera]
          Length = 657

 Score =  309 bits (791), Expect = 3e-82
 Identities = 147/195 (75%), Positives = 170/195 (87%)
 Frame = -3

Query: 585  LLGRAGCLDEAEALIKSMPIKPDSIIWKTLLSACKIHKNTEMARRVAENVLRLDPQDAVP 406
            LLGR G ++EAEALI+SMP+K D I WKTLLSACKIHK TEMARR++E V RLDP+D VP
Sbjct: 431  LLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVP 490

Query: 405  YVLLSNIHASTKGWGDVSEMRKTMRDKNVKKEPGISWLEVKNQVHQFRVGDKSHPKWLEI 226
            YVLLSNIHAS K W DVS++RK MRD+ +KKEPGISWLEVKNQ+HQF +GDKSHPK +EI
Sbjct: 491  YVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEI 550

Query: 225  DEYLKELTSEMRKRGYVPDTNSVLHDMDIEEKEYHLAHHSEKLAIAFALLSTTSGAPIRV 46
              YL+ELTSEM+KRGYVPD +SVLHDMD+E+KEY L HHSEKLAIAFALL T  G PIRV
Sbjct: 551  ASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPIRV 610

Query: 45   MKNMRVCNDCHLAIK 1
            +KN+RVC+DCH+AIK
Sbjct: 611  IKNLRVCSDCHVAIK 625


>ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080-like
            [Glycine max]
          Length = 674

 Score =  301 bits (771), Expect = 5e-80
 Identities = 140/195 (71%), Positives = 174/195 (89%)
 Frame = -3

Query: 585  LLGRAGCLDEAEALIKSMPIKPDSIIWKTLLSACKIHKNTEMARRVAENVLRLDPQDAVP 406
            LLGR+GCL+EAEA+I+SMP+K D+IIWKTLLSACKIHKN E+ARRVA+ VLR+DPQD+  
Sbjct: 448  LLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIARRVADEVLRIDPQDSAS 507

Query: 405  YVLLSNIHASTKGWGDVSEMRKTMRDKNVKKEPGISWLEVKNQVHQFRVGDKSHPKWLEI 226
            YVLL+NI++S   W +VSE+R+ M+DK VKKEPGISW+EVKNQVHQF +GD+ HPK +EI
Sbjct: 508  YVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKNQVHQFHMGDECHPKHVEI 567

Query: 225  DEYLKELTSEMRKRGYVPDTNSVLHDMDIEEKEYHLAHHSEKLAIAFALLSTTSGAPIRV 46
            ++YL+ELTSE++++GYVPDT+SVLHDMD EEKE  L HHSEKLAIAFAL++T  G PIRV
Sbjct: 568  NQYLEELTSEIKRQGYVPDTSSVLHDMDNEEKEQILRHHSEKLAIAFALMNTPEGVPIRV 627

Query: 45   MKNMRVCNDCHLAIK 1
            MKN+RVC+DCH+AIK
Sbjct: 628  MKNLRVCSDCHVAIK 642


>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080-like
            [Cucumis sativus] gi|449526872|ref|XP_004170437.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  291 bits (745), Expect = 6e-77
 Identities = 134/195 (68%), Positives = 167/195 (85%)
 Frame = -3

Query: 585  LLGRAGCLDEAEALIKSMPIKPDSIIWKTLLSACKIHKNTEMARRVAENVLRLDPQDAVP 406
            LLGRAG L+EAE +I+SMP++PD IIWKTLL+ACK+HK  EMA R++E +++LDP DA  
Sbjct: 441  LLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAAS 500

Query: 405  YVLLSNIHASTKGWGDVSEMRKTMRDKNVKKEPGISWLEVKNQVHQFRVGDKSHPKWLEI 226
            YVLLSNIHAS + W +VS++RK MRD++V+KEPGISWLE+KN VHQF +GDKSHP++ EI
Sbjct: 501  YVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEI 560

Query: 225  DEYLKELTSEMRKRGYVPDTNSVLHDMDIEEKEYHLAHHSEKLAIAFALLSTTSGAPIRV 46
            D YLKEL SE+++ GYVP+  SVLHDMD EEKEY+LAHHSEK AIAFAL++T+   PIRV
Sbjct: 561  DLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRV 620

Query: 45   MKNMRVCNDCHLAIK 1
            MKN+RVC+DCH AIK
Sbjct: 621  MKNLRVCDDCHNAIK 635


>ref|XP_002322810.1| predicted protein [Populus trichocarpa] gi|222867440|gb|EEF04571.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  286 bits (731), Expect = 2e-75
 Identities = 135/195 (69%), Positives = 163/195 (83%)
 Frame = -3

Query: 585 LLGRAGCLDEAEALIKSMPIKPDSIIWKTLLSACKIHKNTEMARRVAENVLRLDPQDAVP 406
           LLGR+GCLDEAEA+I+SMP++ D +IWKTLLSAC+IH+N +MA R AE +LRL+PQD+  
Sbjct: 336 LLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRLNPQDSAT 395

Query: 405 YVLLSNIHASTKGWGDVSEMRKTMRDKNVKKEPGISWLEVKNQVHQFRVGDKSHPKWLEI 226
           YVLLSNIHAS K W DVS++R TMRD+NVKKEPG+SWLEVKN+V QF +GDKSHP   EI
Sbjct: 396 YVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEI 455

Query: 225 DEYLKELTSEMRKRGYVPDTNSVLHDMDIEEKEYHLAHHSEKLAIAFALLSTTSGAPIRV 46
           D YLKEL  EM+ RGYVPDT +V HD D EEKE  L +HSEKLAIAF L++   G+PIRV
Sbjct: 456 DLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIAFGLMNIPPGSPIRV 515

Query: 45  MKNMRVCNDCHLAIK 1
           MKN+R+C+DCH+AIK
Sbjct: 516 MKNLRICSDCHVAIK 530


>ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325746|gb|EFH56166.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 565

 Score =  280 bits (715), Expect = 2e-73
 Identities = 133/195 (68%), Positives = 159/195 (81%)
 Frame = -3

Query: 585 LLGRAGCLDEAEALIKSMPIKPDSIIWKTLLSACKIHKNTEMARRVAENVLRLDPQDAVP 406
           LLGRAGCLD+AEA+IKSMPIKPD +IWKTLLSAC IHKN EMA++V + +L +DP D+  
Sbjct: 339 LLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEILEIDPNDSAC 398

Query: 405 YVLLSNIHASTKGWGDVSEMRKTMRDKNVKKEPGISWLEVKNQVHQFRVGDKSHPKWLEI 226
           YVLL+N+HAS K W DVSE+RK+MRDKNVKKE GISW E K +VHQF++GD+S  K  EI
Sbjct: 399 YVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEI 458

Query: 225 DEYLKELTSEMRKRGYVPDTNSVLHDMDIEEKEYHLAHHSEKLAIAFALLSTTSGAPIRV 46
             YLKELT EM+ +GY PDT SVLHDMD EEKE  L  HSEKLA+AFAL+    GAPIR+
Sbjct: 459 YSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRI 518

Query: 45  MKNMRVCNDCHLAIK 1
           +KN+RVC+DCH+A K
Sbjct: 519 IKNLRVCSDCHVAFK 533