BLASTX nr result

ID: Coptis25_contig00019806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019806
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519041.1| PREDICTED: neurochondrin-like [Glycine max]       181   4e-44
ref|XP_003518905.1| PREDICTED: neurochondrin-like [Glycine max]       180   9e-44
ref|XP_002283008.2| PREDICTED: neurochondrin-like [Vitis vinifera]    177   6e-43
emb|CBI21102.3| unnamed protein product [Vitis vinifera]              177   6e-43
ref|XP_003572903.1| PREDICTED: neurochondrin-like [Brachypodium ...   174   9e-42

>ref|XP_003519041.1| PREDICTED: neurochondrin-like [Glycine max]
          Length = 621

 Score =  181 bits (460), Expect = 4e-44
 Identities = 90/138 (65%), Positives = 111/138 (80%)
 Frame = -3

Query: 416 LEFLQDAKEHGQRKGADLLASVRVVGSYLAESPFVCKEKVQDLVEYILSVEGEDESSPFY 237
           LE+L+DAKEHGQ+KG DLLASVR++GSYLAE+P  CKEKVQDL+ Y+LS+EGEDE  PFY
Sbjct: 386 LEYLEDAKEHGQKKGDDLLASVRIIGSYLAEAPVACKEKVQDLLGYMLSLEGEDEQRPFY 445

Query: 236 SVCFMLPLLCQITTETEGCRILASNKGLEPVTDCLVKLMDLNNLVVGEAFGTIFLACDTI 57
           +VCF+LP+L QIT E EGC+ LAS KGLE V DC  KL+  +  +V E  G IF+ACDTI
Sbjct: 446 AVCFLLPMLSQITMEIEGCKALASCKGLEAVLDCFSKLVGSHAFLV-EDNGCIFMACDTI 504

Query: 56  MNILLKKKEASIRLDGSS 3
           MN+LLKK +  I+LD S+
Sbjct: 505 MNLLLKKDKVQIKLDVSA 522


>ref|XP_003518905.1| PREDICTED: neurochondrin-like [Glycine max]
          Length = 616

 Score =  180 bits (457), Expect = 9e-44
 Identities = 90/138 (65%), Positives = 110/138 (79%)
 Frame = -3

Query: 416 LEFLQDAKEHGQRKGADLLASVRVVGSYLAESPFVCKEKVQDLVEYILSVEGEDESSPFY 237
           LE+L+DAKEHGQ+KG DLLASVR++GSYLAE+P  CKEKVQDL+ Y+LS+EGEDE  PFY
Sbjct: 381 LEYLEDAKEHGQKKGDDLLASVRIIGSYLAEAPVACKEKVQDLLGYMLSLEGEDEQRPFY 440

Query: 236 SVCFMLPLLCQITTETEGCRILASNKGLEPVTDCLVKLMDLNNLVVGEAFGTIFLACDTI 57
           +VCF+LP+L QIT E EGC+ LAS KGLE V DC  KL+  +  +V E  G IF+ACDTI
Sbjct: 441 AVCFLLPMLSQITMEIEGCKALASCKGLEAVLDCFSKLVGSHAFLV-EDNGCIFMACDTI 499

Query: 56  MNILLKKKEASIRLDGSS 3
           MN+LLKK +  I LD S+
Sbjct: 500 MNLLLKKDKVQIMLDVSA 517


>ref|XP_002283008.2| PREDICTED: neurochondrin-like [Vitis vinifera]
          Length = 629

 Score =  177 bits (450), Expect = 6e-43
 Identities = 83/138 (60%), Positives = 112/138 (81%)
 Frame = -3

Query: 416 LEFLQDAKEHGQRKGADLLASVRVVGSYLAESPFVCKEKVQDLVEYILSVEGEDESSPFY 237
           LE+LQDAK+HGQ+KG DLLASVR++GSYLAE+P  C+EKV++L+E++LS+EGEDE  PF+
Sbjct: 388 LEYLQDAKDHGQKKGDDLLASVRLIGSYLAETPLACREKVRELLEFMLSIEGEDEPRPFF 447

Query: 236 SVCFMLPLLCQITTETEGCRILASNKGLEPVTDCLVKLMDLNNLVVGEAFGTIFLACDTI 57
           S+CF+LP+LCQIT E EGC+IL S  G + V +CL+KL+  N  ++ E  G IFLACDTI
Sbjct: 448 SICFLLPMLCQITMEIEGCKILVSCGGQKAVVECLIKLIGPNGCMI-EDKGCIFLACDTI 506

Query: 56  MNILLKKKEASIRLDGSS 3
           +N+LLK+ +   RLD S+
Sbjct: 507 LNLLLKRDQIKFRLDEST 524


>emb|CBI21102.3| unnamed protein product [Vitis vinifera]
          Length = 713

 Score =  177 bits (450), Expect = 6e-43
 Identities = 83/138 (60%), Positives = 112/138 (81%)
 Frame = -3

Query: 416 LEFLQDAKEHGQRKGADLLASVRVVGSYLAESPFVCKEKVQDLVEYILSVEGEDESSPFY 237
           LE+LQDAK+HGQ+KG DLLASVR++GSYLAE+P  C+EKV++L+E++LS+EGEDE  PF+
Sbjct: 472 LEYLQDAKDHGQKKGDDLLASVRLIGSYLAETPLACREKVRELLEFMLSIEGEDEPRPFF 531

Query: 236 SVCFMLPLLCQITTETEGCRILASNKGLEPVTDCLVKLMDLNNLVVGEAFGTIFLACDTI 57
           S+CF+LP+LCQIT E EGC+IL S  G + V +CL+KL+  N  ++ E  G IFLACDTI
Sbjct: 532 SICFLLPMLCQITMEIEGCKILVSCGGQKAVVECLIKLIGPNGCMI-EDKGCIFLACDTI 590

Query: 56  MNILLKKKEASIRLDGSS 3
           +N+LLK+ +   RLD S+
Sbjct: 591 LNLLLKRDQIKFRLDEST 608


>ref|XP_003572903.1| PREDICTED: neurochondrin-like [Brachypodium distachyon]
          Length = 660

 Score =  174 bits (440), Expect = 9e-42
 Identities = 80/135 (59%), Positives = 107/135 (79%)
 Frame = -3

Query: 416 LEFLQDAKEHGQRKGADLLASVRVVGSYLAESPFVCKEKVQDLVEYILSVEGEDESSPFY 237
           L+F+QDAK+HGQRKG DLLA+VR+VGSYLAE+P+ CKEK + L+E+I  +EG+DESSPFY
Sbjct: 422 LDFIQDAKDHGQRKGDDLLAAVRIVGSYLAETPYACKEKTERLLEFIFCIEGQDESSPFY 481

Query: 236 SVCFMLPLLCQITTETEGCRILASNKGLEPVTDCLVKLMDLNNLVVGEAFGTIFLACDTI 57
           SVCFMLP+L QITT  +GCR LAS  G   V DCL+K+ + N +++    G++FLACDTI
Sbjct: 482 SVCFMLPMLSQITTTADGCRTLASFGGYRTVIDCLIKMTEQNGMIIDH--GSMFLACDTI 539

Query: 56  MNILLKKKEASIRLD 12
           +N++  KK A I ++
Sbjct: 540 INLMSNKKNAHISME 554


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