BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019802
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30028.3| unnamed protein product [Vitis vinifera]              269   7e-70
ref|XP_002279026.1| PREDICTED: non-structural maintenance of chr...   269   7e-70
ref|XP_002323286.1| predicted protein [Populus trichocarpa] gi|2...   261   1e-67
ref|XP_002453471.1| hypothetical protein SORBIDRAFT_04g006460 [S...   245   8e-63
ref|XP_003571216.1| PREDICTED: non-structural maintenance of chr...   241   2e-61

>emb|CBI30028.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score =  269 bits (687), Expect = 7e-70
 Identities = 146/248 (58%), Positives = 172/248 (69%), Gaps = 2/248 (0%)
 Frame = -2

Query: 819 STENPRDSMAWGNFGFAVCHIIRRAGGCSTMLGPMDMEIXXXXXXXXXRARPPAESSCHP 640
           S E+  +S+ W + G  V HI +RA GC TMLGPM+ E+         +   P ES+  P
Sbjct: 202 SAEDAGNSIVWKDIGLVVSHIFKRASGCCTMLGPMNTEMKQRKPVVHNKRVRPTESA-RP 260

Query: 639 EELDNDA-EEKTDTDKNMSTMFNILRKKRSVRLENLLLNRLSFAQTVENLFALSFLVKDG 463
           EELD+   EEK+DTDKNMS MF+ILRK R VRLENL+LNR SFAQTVENLFALSFLVKDG
Sbjct: 261 EELDDTVVEEKSDTDKNMSIMFDILRKNRRVRLENLILNRNSFAQTVENLFALSFLVKDG 320

Query: 462 RVEITVKDNGHHLVSPKNXXXXXXXASGEVSYSHFTFRLDFKDWKLMMDSVRNGEELMPH 283
           R EITV   G HLVSP+N        SGEV Y+HF FR DFKDWKLM  SV  GEELMP 
Sbjct: 321 RAEITVDGRGCHLVSPRNAPAANAVVSGEVCYNHFVFRFDFKDWKLMATSVGAGEELMPQ 380

Query: 282 RAQAEITNDFQGEPIPVDSQ-TAAPTTPIRKLCRNRGLVVQEESVVEDSPESNSAADKAY 106
           R    + N+ Q + +  + +  AAPTTPIRKL RNRGLV+QE++VVEDSPES+ A  +A 
Sbjct: 381 RNSVNLPNNSQTDSVAEECEAAAAPTTPIRKLSRNRGLVLQEQAVVEDSPESDDAGTRAA 440

Query: 105 AIRKGKRK 82
            IRKGK K
Sbjct: 441 VIRKGKGK 448


>ref|XP_002279026.1| PREDICTED: non-structural maintenance of chromosome element 4
           [Vitis vinifera]
          Length = 380

 Score =  269 bits (687), Expect = 7e-70
 Identities = 146/248 (58%), Positives = 172/248 (69%), Gaps = 2/248 (0%)
 Frame = -2

Query: 819 STENPRDSMAWGNFGFAVCHIIRRAGGCSTMLGPMDMEIXXXXXXXXXRARPPAESSCHP 640
           S E+  +S+ W + G  V HI +RA GC TMLGPM+ E+         +   P ES+  P
Sbjct: 130 SAEDAGNSIVWKDIGLVVSHIFKRASGCCTMLGPMNTEMKQRKPVVHNKRVRPTESA-RP 188

Query: 639 EELDNDA-EEKTDTDKNMSTMFNILRKKRSVRLENLLLNRLSFAQTVENLFALSFLVKDG 463
           EELD+   EEK+DTDKNMS MF+ILRK R VRLENL+LNR SFAQTVENLFALSFLVKDG
Sbjct: 189 EELDDTVVEEKSDTDKNMSIMFDILRKNRRVRLENLILNRNSFAQTVENLFALSFLVKDG 248

Query: 462 RVEITVKDNGHHLVSPKNXXXXXXXASGEVSYSHFTFRLDFKDWKLMMDSVRNGEELMPH 283
           R EITV   G HLVSP+N        SGEV Y+HF FR DFKDWKLM  SV  GEELMP 
Sbjct: 249 RAEITVDGRGCHLVSPRNAPAANAVVSGEVCYNHFVFRFDFKDWKLMATSVGAGEELMPQ 308

Query: 282 RAQAEITNDFQGEPIPVDSQ-TAAPTTPIRKLCRNRGLVVQEESVVEDSPESNSAADKAY 106
           R    + N+ Q + +  + +  AAPTTPIRKL RNRGLV+QE++VVEDSPES+ A  +A 
Sbjct: 309 RNSVNLPNNSQTDSVAEECEAAAAPTTPIRKLSRNRGLVLQEQAVVEDSPESDDAGTRAA 368

Query: 105 AIRKGKRK 82
            IRKGK K
Sbjct: 369 VIRKGKGK 376


>ref|XP_002323286.1| predicted protein [Populus trichocarpa] gi|222867916|gb|EEF05047.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  261 bits (667), Expect = 1e-67
 Identities = 138/241 (57%), Positives = 168/241 (69%), Gaps = 2/241 (0%)
 Frame = -2

Query: 843 FAHQNG-ELSTENPRDSMAWGNFGFAVCHIIRRAGGCSTMLGPMDMEIXXXXXXXXXRAR 667
           F  Q+G   ST+  R+ +AW + G AV HI     GC TM+GPMD E+         R  
Sbjct: 73  FGRQDGPSTSTDGSRNLIAWKDIGVAVSHIFSSCPGCCTMVGPMDTELKQRKAVVGRRRT 132

Query: 666 PPAESSCHPEEL-DNDAEEKTDTDKNMSTMFNILRKKRSVRLENLLLNRLSFAQTVENLF 490
            P   S  PEE+ D+ A+E+TDTDKNM+TMF+IL+ KRSV+LENL+LNR SFAQTVENLF
Sbjct: 133 RPT-GSVQPEEVNDSGAKERTDTDKNMATMFSILKNKRSVKLENLVLNRNSFAQTVENLF 191

Query: 489 ALSFLVKDGRVEITVKDNGHHLVSPKNXXXXXXXASGEVSYSHFTFRLDFKDWKLMMDSV 310
           ALSFLVKDGR EI V +NG HLVSP+N        SGEV+Y HF FR DFKDWKLM+ +V
Sbjct: 192 ALSFLVKDGRAEIKVNENGWHLVSPRNAPDAGKVVSGEVAYRHFVFRFDFKDWKLMISAV 251

Query: 309 RNGEELMPHRAQAEITNDFQGEPIPVDSQTAAPTTPIRKLCRNRGLVVQEESVVEDSPES 130
             GEELMP+R Q  + +D   +PIPV++Q   PTTPIRK  RNRGLV+QE++VVEDS   
Sbjct: 252 EVGEELMPNRNQINMPSDSLADPIPVETQAGGPTTPIRKFSRNRGLVLQEKTVVEDSTPE 311

Query: 129 N 127
           N
Sbjct: 312 N 312


>ref|XP_002453471.1| hypothetical protein SORBIDRAFT_04g006460 [Sorghum bicolor]
           gi|241933302|gb|EES06447.1| hypothetical protein
           SORBIDRAFT_04g006460 [Sorghum bicolor]
          Length = 353

 Score =  245 bits (626), Expect = 8e-63
 Identities = 130/253 (51%), Positives = 172/253 (67%), Gaps = 3/253 (1%)
 Frame = -2

Query: 846 KFAHQNGELSTENPRDSMAWGNFGFAVCHIIRRAGGCSTMLGPMDMEIXXXXXXXXXRAR 667
           KF  Q    S ++   S+ WG+ G +V HI R   GC TMLGPMD E+         R R
Sbjct: 105 KFGQQG---SLDDEAVSLQWGDLGLSVSHIFRPMPGCCTMLGPMDTEVKQRKVAAVGRKR 161

Query: 666 P--PAESSCHPEELDNDAEEKTDTDKNMSTMFNILRKKRSVRLENLLLNRLSFAQTVENL 493
              P E++C  E  D+  E K+DTD+N+  +F++LR+K+S +LENL+LNRLSFAQTVEN+
Sbjct: 162 TARPTENTCPEELADSSEEVKSDTDRNVLVIFDVLRRKKSAKLENLVLNRLSFAQTVENI 221

Query: 492 FALSFLVKDGRVEITVKDNGHHLVSPKNXXXXXXXASGEVSYSHFTFRLDFKDWKLMMDS 313
           FALSFLVKDGRVEI + DNGHH+V P+N       ASGEVSYSHF FR DFKDWKLM ++
Sbjct: 222 FALSFLVKDGRVEINIDDNGHHIVRPRNAPAASAIASGEVSYSHFVFRFDFKDWKLMKEA 281

Query: 312 VRNGEELMPHR-AQAEITNDFQGEPIPVDSQTAAPTTPIRKLCRNRGLVVQEESVVEDSP 136
           V+ GEEL+PHR +Q+ + N+   +P   + +  A  TPIRKL RNRGL++Q ++VVE++P
Sbjct: 282 VKEGEELLPHRTSQSALCNEENYQP---NMEARAQVTPIRKLSRNRGLILQ-DNVVEETP 337

Query: 135 ESNSAADKAYAIR 97
           E N A+ +    R
Sbjct: 338 EENQASKRRRLFR 350


>ref|XP_003571216.1| PREDICTED: non-structural maintenance of chromosome element 4-like
           [Brachypodium distachyon]
          Length = 361

 Score =  241 bits (615), Expect = 2e-61
 Identities = 131/248 (52%), Positives = 168/248 (67%), Gaps = 3/248 (1%)
 Frame = -2

Query: 846 KFAHQNGELSTENPRDSMAWGNFGFAVCHIIRRAGGCSTMLGPMDMEIXXXXXXXXXRAR 667
           KF  Q G    ++   S+ W + GF+  H+ +   GC TMLGPMD E+         R R
Sbjct: 114 KFGQQGG---LDSEPASLRWADIGFSASHVFQAVPGCRTMLGPMDTEVKQRKVSVVNRKR 170

Query: 666 P--PAESSCHPEELDNDAE-EKTDTDKNMSTMFNILRKKRSVRLENLLLNRLSFAQTVEN 496
              P E++  PEEL + +E  KTDTD+N+S +F+ILRKK+SVRLENL+LNR SFAQTVEN
Sbjct: 171 TAKPTENT-RPEELADSSEGAKTDTDRNVSVVFDILRKKKSVRLENLVLNRHSFAQTVEN 229

Query: 495 LFALSFLVKDGRVEITVKDNGHHLVSPKNXXXXXXXASGEVSYSHFTFRLDFKDWKLMMD 316
           +FALSFLVKDGRV I + DNGHH+V P+N       ASGEVSYSHF FR D++DWKLM +
Sbjct: 230 VFALSFLVKDGRVAINIDDNGHHIVYPRNAPAASAIASGEVSYSHFVFRFDYRDWKLMRE 289

Query: 315 SVRNGEELMPHRAQAEITNDFQGEPIPVDSQTAAPTTPIRKLCRNRGLVVQEESVVEDSP 136
            V +GEELMPHR Q    N+ + E +    +  A  TPIRKLCRNRGLV+QE+ VV ++P
Sbjct: 290 VVADGEELMPHRTQGSPCNE-ENEHL----EQCAQQTPIRKLCRNRGLVLQEQMVVAETP 344

Query: 135 ESNSAADK 112
           E++  + K
Sbjct: 345 EADKTSSK 352