BLASTX nr result
ID: Coptis25_contig00019772
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00019772
(575 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272933.1| PREDICTED: uncharacterized protein At5g43822... 177 8e-43
ref|XP_002510698.1| conserved hypothetical protein [Ricinus comm... 153 2e-35
ref|NP_001154759.1| pentatricopeptide repeat-containing protein-... 150 2e-34
dbj|BAJ99010.1| predicted protein [Hordeum vulgare subsp. vulgare] 148 6e-34
ref|NP_001065428.1| Os10g0566900 [Oryza sativa Japonica Group] g... 146 2e-33
>ref|XP_002272933.1| PREDICTED: uncharacterized protein At5g43822 [Vitis vinifera]
gi|297745571|emb|CBI40736.3| unnamed protein product
[Vitis vinifera]
Length = 198
Score = 177 bits (450), Expect = 8e-43
Identities = 91/147 (61%), Positives = 113/147 (76%), Gaps = 4/147 (2%)
Frame = -1
Query: 575 YGVLKSINGIKEEILGKQMMSLEVILHSLKDTMSDFQGIVVSLEKIFRDGRHLANGSSKK 396
YG LK I+GI + +L KQM SLE IL SLK T+ +F GIV+SLEKI RDGR L G S K
Sbjct: 52 YGTLKCIDGIGDAVLRKQMESLETILLSLKKTLKEFHGIVLSLEKIVRDGRQLVKGGSVK 111
Query: 395 VN----ELRIGIRPSIADCIEGLKVVYEMHQSEYLLKLSIVSLLTSKIPPPSAGDLGALR 228
+ + RIG++PS+ADC++GL +++EMHQSEYLLK S+VS L++ PSA DLGAL
Sbjct: 112 LTMKQLQQRIGVKPSLADCLDGLSLLHEMHQSEYLLKSSVVSALSTLTLKPSASDLGALH 171
Query: 227 QLLIDQPNIPKEEVRSIFDIILAEEIC 147
QLL+DQPNIPKEEV+ IFDI+ AEEIC
Sbjct: 172 QLLVDQPNIPKEEVQFIFDIVFAEEIC 198
>ref|XP_002510698.1| conserved hypothetical protein [Ricinus communis]
gi|223551399|gb|EEF52885.1| conserved hypothetical
protein [Ricinus communis]
Length = 181
Score = 153 bits (386), Expect = 2e-35
Identities = 76/148 (51%), Positives = 106/148 (71%), Gaps = 5/148 (3%)
Frame = -1
Query: 575 YGVLKSINGIKEEILGKQMMSLEVILHSLKDTMSDFQGIVVSLEKIFRDGRHLANGSSK- 399
YG L + GI + ++ KQM SL+ IL S+ T+ +FQGIV+ LE++ RDG+ L G
Sbjct: 34 YGSLNCVGGIADVVMRKQMESLQTILISINKTLDEFQGIVMILERMHRDGKQLVQGGGSN 93
Query: 398 ----KVNELRIGIRPSIADCIEGLKVVYEMHQSEYLLKLSIVSLLTSKIPPPSAGDLGAL 231
K + R+GI+P +ADC++GL ++ +MH+SEYLLK S+VS L + + PS+ DL AL
Sbjct: 94 HLTAKQLQQRVGIKPCLADCLDGLMILRDMHRSEYLLKSSLVSALPALVLKPSSSDLAAL 153
Query: 230 RQLLIDQPNIPKEEVRSIFDIILAEEIC 147
+QLL+DQPNIP+EEV+ IFDII AEEIC
Sbjct: 154 QQLLVDQPNIPREEVQFIFDIIFAEEIC 181
>ref|NP_001154759.1| pentatricopeptide repeat-containing protein-like protein
[Arabidopsis thaliana]
gi|75127120|sp|Q6NPG7.1|Y5382_ARATH RecName:
Full=Uncharacterized protein At5g43822
gi|38454054|gb|AAR20721.1| At5g43820 [Arabidopsis
thaliana] gi|38603984|gb|AAR24735.1| At5g43820
[Arabidopsis thaliana] gi|332007630|gb|AED95013.1|
pentatricopeptide repeat-containing protein-like protein
[Arabidopsis thaliana]
Length = 195
Score = 150 bits (378), Expect = 2e-34
Identities = 75/143 (52%), Positives = 105/143 (73%), Gaps = 1/143 (0%)
Frame = -1
Query: 575 YGVLKSINGIKEEILGKQMMSLEVILHSLKDTMSDFQGIVVSLEKIFRDGRHLAN-GSSK 399
YG L+ + GI++ ++ +QM LE +L S+K+ M +F G V++ EK+ RDG L SSK
Sbjct: 52 YGALRCLKGIEDAVVQQQMGQLESLLRSMKNVMEEFWGCVLTFEKLHRDGLQLREIESSK 111
Query: 398 KVNELRIGIRPSIADCIEGLKVVYEMHQSEYLLKLSIVSLLTSKIPPPSAGDLGALRQLL 219
+ E RIG++P I DC+EGL ++Y+MHQSEY LK SI+S+L+ I PS GDL AL+ L+
Sbjct: 112 RRVEERIGVKPCITDCLEGLSILYDMHQSEYHLKSSILSVLSCLILKPSPGDLNALQYLV 171
Query: 218 IDQPNIPKEEVRSIFDIILAEEI 150
+DQPNIPK+EV+ IFD+I AEEI
Sbjct: 172 VDQPNIPKDEVQHIFDVIFAEEI 194
>dbj|BAJ99010.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 194
Score = 148 bits (374), Expect = 6e-34
Identities = 74/146 (50%), Positives = 105/146 (71%), Gaps = 3/146 (2%)
Frame = -1
Query: 575 YGVLKSINGIKEEILGKQMMSLEVILHSLKDTMSDFQGIVVSLEKIFRDGRHLANGSSK- 399
YGVL+ + I+E++LGKQM SLE+I +++T+ + GI L K+ RD + G S
Sbjct: 52 YGVLRCVPNIREDLLGKQMESLELIFVLMRETLEELNGIAKGLSKVLRDTNQMVRGGSAL 111
Query: 398 --KVNELRIGIRPSIADCIEGLKVVYEMHQSEYLLKLSIVSLLTSKIPPPSAGDLGALRQ 225
K +L++GI P+I DC++GL+ + +MHQ+EY LK SI+SLLT K S+ D+ A+RQ
Sbjct: 112 TAKQLQLKVGILPTITDCLDGLRTLSDMHQAEYALKSSIISLLTWK---SSSSDIAAMRQ 168
Query: 224 LLIDQPNIPKEEVRSIFDIILAEEIC 147
LL+DQPNIPK+EV+SIFDII A+EIC
Sbjct: 169 LLVDQPNIPKDEVQSIFDIIFADEIC 194
>ref|NP_001065428.1| Os10g0566900 [Oryza sativa Japonica Group]
gi|18855001|gb|AAL79693.1|AC087599_12 hypothetical
protein [Oryza sativa Japonica Group]
gi|31433571|gb|AAP55069.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|113639960|dbj|BAF27265.1| Os10g0566900 [Oryza sativa
Japonica Group] gi|215678750|dbj|BAG95187.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218185039|gb|EEC67466.1| hypothetical protein
OsI_34696 [Oryza sativa Indica Group]
gi|222613293|gb|EEE51425.1| hypothetical protein
OsJ_32504 [Oryza sativa Japonica Group]
Length = 194
Score = 146 bits (369), Expect = 2e-33
Identities = 74/146 (50%), Positives = 104/146 (71%), Gaps = 3/146 (2%)
Frame = -1
Query: 575 YGVLKSINGIKEEILGKQMMSLEVILHSLKDTMSDFQGIVVSLEKIFRDGRHLANGSSK- 399
YGVL+ + I+E +LGKQM SLE+I S+++T+ +F I SL K RD + G S
Sbjct: 52 YGVLRCVPNIRENLLGKQMESLEIIFVSMRETVEEFNSIARSLHKALRDTNQMVRGGSAL 111
Query: 398 --KVNELRIGIRPSIADCIEGLKVVYEMHQSEYLLKLSIVSLLTSKIPPPSAGDLGALRQ 225
K +L++GI P+IADC++GL+ + EMHQ+EY LK S++S LT S+ D+ A+RQ
Sbjct: 112 SAKQMQLQVGILPTIADCLDGLRTLCEMHQAEYALKSSVISSLTWT---SSSSDIAAMRQ 168
Query: 224 LLIDQPNIPKEEVRSIFDIILAEEIC 147
LL+DQPNIPK+EV++IFDII A+EIC
Sbjct: 169 LLVDQPNIPKDEVQAIFDIIFADEIC 194