BLASTX nr result
ID: Coptis25_contig00019769
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00019769 (1187 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002307899.1| predicted protein [Populus trichocarpa] gi|2... 104 5e-20 ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2... 103 6e-20 emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] 96 1e-17 ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 96 2e-17 ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ... 94 7e-17 >ref|XP_002307899.1| predicted protein [Populus trichocarpa] gi|222853875|gb|EEE91422.1| predicted protein [Populus trichocarpa] Length = 359 Score = 104 bits (259), Expect = 5e-20 Identities = 73/197 (37%), Positives = 102/197 (51%), Gaps = 10/197 (5%) Frame = -2 Query: 1150 DIIFYEGMLYGLSKMYTLVRFNLENQKPLVAHKMRNMIPTFPFTPNRCTNPRSYLVESC- 974 DI FY G LY +S Y + E + +A + + +P R YLVES Sbjct: 170 DITFYRGKLYAMS-YYNAIYICDEARDGSIAWRRLDTLPLNLKKKERGRCDFRYLVESNN 228 Query: 973 GELLVVYRIRDCFMDMNTLKFVTTKFLVFKLD-KYGDAPNWVEVDNLGDQMIFLGRNSAI 797 GELL+V R+RD T +F+VFKLD + D WV ++N+G+Q+IFLGRN Sbjct: 229 GELLMVVRVRD--------HGFTIQFIVFKLDDETSDPAKWVRLENIGNQIIFLGRNHTK 280 Query: 796 SISAKGVPGFRGNCIYFTDDGFEFFR-RSNCRLTCLDNGVFYLEDGHIDSFFP------- 641 + A PGF GNC+Y++ D + FR + D GV+ LE + FFP Sbjct: 281 CVPAIDFPGFEGNCVYYSCDLWNHFRVLPMDQRDYADMGVYGLERRGKEEFFPENYGAFM 340 Query: 640 LDSSHSFESQPVWISPN 590 +S HSF+ P+WI+PN Sbjct: 341 PNSEHSFKYPPIWITPN 357 >ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1| predicted protein [Populus trichocarpa] Length = 393 Score = 103 bits (258), Expect = 6e-20 Identities = 66/192 (34%), Positives = 102/192 (53%), Gaps = 5/192 (2%) Frame = -2 Query: 1150 DIIFYEGMLYGLSKMYTLVRFNLENQKPLVAHKMRNMIPTFPFTPNRCTNPRSYLVESCG 971 D+I++ G+ Y ++K +V ++ P V+ F TP + YLV S Sbjct: 215 DVIYFNGLFYAVNKAGQIVVCDVNGNSPKVS---------FIETPRQIGGDMQYLVSSGD 265 Query: 970 ELLVVYRIRDCFMDMNTLKFVTTKFLVFKLDKYGDAPNWVEVDNLGDQMIFLGRNSAISI 791 LL+V R D ++ + + T +F VFKLD G P W V +LGD M+F+G NS++++ Sbjct: 266 GLLLVTRYLDLDVEFDIFIYKTARFEVFKLDLNG--PRWERVTSLGDMMLFIGENSSLAL 323 Query: 790 SAKGVPGFRGNCIYFTDDGFEFFRRSNC--RLTCLDNGVFYLEDGHIDSF--FPLDSSHS 623 SA G+ G G+CIY+TDD + +N + D G+F L DG I+ +P +S Sbjct: 324 SASGLSGCMGDCIYYTDD----YSANNYDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSR 379 Query: 622 FE-SQPVWISPN 590 + P+WISPN Sbjct: 380 LQWPPPLWISPN 391 >emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] Length = 389 Score = 96.3 bits (238), Expect = 1e-17 Identities = 69/194 (35%), Positives = 102/194 (52%), Gaps = 7/194 (3%) Frame = -2 Query: 1150 DIIFYEGMLYGLSKMYTLVRFNLENQKPLVAHKMRNMIPTFPFTPNRCTNPRSYLVESCG 971 D+IF+ G+ Y ++K ++ ++ P V+ P + YLVES Sbjct: 211 DVIFHRGLFYAVNKYGSIAVCDVSGSSPRVS---------IIEMPQQFGGDLQYLVESGE 261 Query: 970 ELLVVYRIRDCFMDMN----TLKFVTTKFLVFKLDKYGDAPNWVEVDNLGDQMIFLGRNS 803 ELL+V R D D+ +L + TT+F V +LD AP W V +LGD+ +FLG N Sbjct: 262 ELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDS--KAPRWEVVSSLGDRALFLGENL 319 Query: 802 AISISAKGVPGFRGNCIYFTDDGFEFFRRSNCRLTCLDNGVFYLEDGHIDSFFPLDSSHS 623 ++S+S+ PG +GNCIY+TDD E + D G+F LEDG I+ PL SH Sbjct: 320 SLSLSSVDFPGCKGNCIYYTDDYSE--DNYDGIGGEQDLGIFNLEDGSIE---PLPCSH- 373 Query: 622 FESQ---PVWISPN 590 F + P+W++PN Sbjct: 374 FRIRWPPPLWVTPN 387 >ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera] Length = 389 Score = 95.5 bits (236), Expect = 2e-17 Identities = 69/194 (35%), Positives = 102/194 (52%), Gaps = 7/194 (3%) Frame = -2 Query: 1150 DIIFYEGMLYGLSKMYTLVRFNLENQKPLVAHKMRNMIPTFPFTPNRCTNPRSYLVESCG 971 D+IF+ G+ Y ++K ++ ++ P V+ P + YLVES Sbjct: 211 DVIFHRGLFYAVNKYGSIAVCDVSGSSPRVS---------IIEMPQQFGGDLQYLVESGE 261 Query: 970 ELLVVYRIRDCFMDMN----TLKFVTTKFLVFKLDKYGDAPNWVEVDNLGDQMIFLGRNS 803 ELL+V R D D+ +L + TT+F V +LD AP W V +LGD+ +FLG N Sbjct: 262 ELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDL--KAPRWEVVSSLGDRALFLGENL 319 Query: 802 AISISAKGVPGFRGNCIYFTDDGFEFFRRSNCRLTCLDNGVFYLEDGHIDSFFPLDSSHS 623 ++S+S+ PG +GNCIY+TDD E + D G+F LEDG I+ PL SH Sbjct: 320 SLSLSSVDFPGCKGNCIYYTDDYSE--DNYDGIGGEQDLGIFNLEDGSIE---PLPCSH- 373 Query: 622 FESQ---PVWISPN 590 F + P+W++PN Sbjct: 374 FRIRWPPPLWVTPN 387 >ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 398 Score = 94.0 bits (232), Expect = 7e-17 Identities = 65/196 (33%), Positives = 99/196 (50%), Gaps = 9/196 (4%) Frame = -2 Query: 1150 DIIFYEGMLYGLSKMYTLVRFNLENQKPLVAHKMRNMIPTFPFTPNRCTNPRSYLVESCG 971 D+IF GM Y ++K +V ++ + P V+ F TP + YLV S Sbjct: 214 DVIFVNGMFYAVNKAGQIVICDISSDSPRVS---------FMETPRQAGGDMQYLVNSGD 264 Query: 970 ELLVVYRIRDCFMDMNT------LKFVTTKFLVFKLDKYGDAPNWVEVDNLGDQMIFLGR 809 ELL+V R D + + L + T +F VF+LD G P W+ + LGD+ +F+G Sbjct: 265 ELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNG--PQWLRMSTLGDKALFIGE 322 Query: 808 NSAISISAKGVPGFRGNCIYFTDDGFEFFRRSNCRLTCLDNGVFYLEDGHIDSF--FPLD 635 NS++S+SA G GNCIY+TDD + + D G+F L D I+ +P + Sbjct: 323 NSSLSLSATDFSGCMGNCIYYTDDYLD--ANYDGHFGDHDLGIFKLCDETIEPLPCYPRN 380 Query: 634 SSHSFE-SQPVWISPN 590 + + S P+W+SPN Sbjct: 381 FTSPLQWSPPLWVSPN 396