BLASTX nr result

ID: Coptis25_contig00019758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019758
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266717.2| PREDICTED: asparaginyl-tRNA synthetase, chlo...   138   4e-31
ref|XP_003635124.1| PREDICTED: asparaginyl-tRNA synthetase, chlo...   138   4e-31
ref|XP_004147209.1| PREDICTED: asparagine--tRNA ligase, chloropl...   126   2e-27
ref|XP_002309798.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002327980.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26

>ref|XP_002266717.2| PREDICTED: asparaginyl-tRNA synthetase,
           chloroplastic/mitochondrial-like isoform 1 [Vitis
           vinifera]
          Length = 549

 Score =  138 bits (348), Expect = 4e-31
 Identities = 67/81 (82%), Positives = 73/81 (90%)
 Frame = +3

Query: 3   GEKVREFRKRLRIVDVKGGLDEGLDWLGKKLVFKGWVRTLRVQSSVTFLEVNDGSCLSNM 182
           GEKV EFRKRLR+VD+KGG DEGLD LG+ L  KGWVRTLRVQSSV F+EVNDGSCLSNM
Sbjct: 99  GEKVGEFRKRLRVVDIKGGPDEGLDRLGQTLAVKGWVRTLRVQSSVIFIEVNDGSCLSNM 158

Query: 183 QCVINSDADGYDQVESGFIST 245
           QCV+NSDADGYDQVESG I+T
Sbjct: 159 QCVMNSDADGYDQVESGSITT 179


>ref|XP_003635124.1| PREDICTED: asparaginyl-tRNA synthetase,
           chloroplastic/mitochondrial-like isoform 2 [Vitis
           vinifera] gi|297744376|emb|CBI37350.3| unnamed protein
           product [Vitis vinifera]
          Length = 584

 Score =  138 bits (348), Expect = 4e-31
 Identities = 67/81 (82%), Positives = 73/81 (90%)
 Frame = +3

Query: 3   GEKVREFRKRLRIVDVKGGLDEGLDWLGKKLVFKGWVRTLRVQSSVTFLEVNDGSCLSNM 182
           GEKV EFRKRLR+VD+KGG DEGLD LG+ L  KGWVRTLRVQSSV F+EVNDGSCLSNM
Sbjct: 99  GEKVGEFRKRLRVVDIKGGPDEGLDRLGQTLAVKGWVRTLRVQSSVIFIEVNDGSCLSNM 158

Query: 183 QCVINSDADGYDQVESGFIST 245
           QCV+NSDADGYDQVESG I+T
Sbjct: 159 QCVMNSDADGYDQVESGSITT 179


>ref|XP_004147209.1| PREDICTED: asparagine--tRNA ligase,
           chloroplastic/mitochondrial-like [Cucumis sativus]
           gi|449504980|ref|XP_004162346.1| PREDICTED:
           asparagine--tRNA ligase,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 562

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/81 (74%), Positives = 70/81 (86%)
 Frame = +3

Query: 3   GEKVREFRKRLRIVDVKGGLDEGLDWLGKKLVFKGWVRTLRVQSSVTFLEVNDGSCLSNM 182
           GEKV EFRK+LRI ++KGG DEG+D LG+  V  GWVRTLRVQSSVTF+EVNDGSC+SNM
Sbjct: 77  GEKVGEFRKKLRISEIKGGRDEGVDRLGQTFVVMGWVRTLRVQSSVTFMEVNDGSCISNM 136

Query: 183 QCVINSDADGYDQVESGFIST 245
           QCVI+S  +GYDQVESG I+T
Sbjct: 137 QCVIDSTTEGYDQVESGLITT 157


>ref|XP_002309798.1| predicted protein [Populus trichocarpa] gi|222852701|gb|EEE90248.1|
           predicted protein [Populus trichocarpa]
          Length = 578

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/81 (72%), Positives = 70/81 (86%)
 Frame = +3

Query: 3   GEKVREFRKRLRIVDVKGGLDEGLDWLGKKLVFKGWVRTLRVQSSVTFLEVNDGSCLSNM 182
           G +V EFRK+L+I D+KGG DEGLD +GK +V  GWVRTLRVQSSVTF+EVNDGSCLSNM
Sbjct: 93  GNRVGEFRKKLKIADIKGGPDEGLDRVGKTIVVMGWVRTLRVQSSVTFIEVNDGSCLSNM 152

Query: 183 QCVINSDADGYDQVESGFIST 245
           QCV+  +A+GYDQVESG I+T
Sbjct: 153 QCVMGLEAEGYDQVESGLITT 173


>ref|XP_002327980.1| predicted protein [Populus trichocarpa] gi|222837389|gb|EEE75768.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/81 (67%), Positives = 71/81 (87%)
 Frame = +3

Query: 3   GEKVREFRKRLRIVDVKGGLDEGLDWLGKKLVFKGWVRTLRVQSSVTFLEVNDGSCLSNM 182
           G +V EFR++L+I D+KGG DEGLD +GK ++  GWVRTLRVQSSVTF+EVNDGSCLSN+
Sbjct: 89  GNRVGEFRRKLKIADIKGGPDEGLDRVGKTIIVMGWVRTLRVQSSVTFIEVNDGSCLSNL 148

Query: 183 QCVINSDADGYDQVESGFIST 245
           QCV++ +A+GYDQVESG ++T
Sbjct: 149 QCVMDLEAEGYDQVESGLVTT 169


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