BLASTX nr result

ID: Coptis25_contig00019746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019746
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28011.3| unnamed protein product [Vitis vinifera]               94   2e-17
ref|XP_002280503.1| PREDICTED: golgin candidate 1-like [Vitis vi...    94   2e-17
emb|CAN71156.1| hypothetical protein VITISV_036760 [Vitis vinifera]    93   3e-17
ref|XP_002514234.1| Golgin-84, putative [Ricinus communis] gi|22...    75   9e-12
ref|XP_003517645.1| PREDICTED: golgin candidate 1-like [Glycine ...    65   9e-09

>emb|CBI28011.3| unnamed protein product [Vitis vinifera]
          Length = 712

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 2/180 (1%)
 Frame = -1

Query: 536 SSENGGDVGSNEI-QTSKELQMDLRHDGTTPEISLPDSLPNEVEENDGASKVESLPTVND 360
           S EN     SN   Q + E   +   D +   I   ++LPN++ + + A   E  PTV D
Sbjct: 95  SFENDETTSSNSTAQANNEQLQNGNKDASVFGIPSLETLPNDMVKPE-ADLPEVAPTVTD 153

Query: 359 LEADSPTK-GESITEKTIDEGKEPFALDLLDTGVDTIDRDLPADAGQDIKTENEGTSQKI 183
           +EA + T  GE + +K      +P +      GV+ +  D P +AGQ+IK+ +     +I
Sbjct: 154 VEAIASTSNGELVNDKADANEGQPTSFSPT-AGVEIVSEDHPVEAGQNIKSRDADVPSQI 212

Query: 182 DDEGSELGSVETHVHYHSQAKDADTKEEPLLDSKKQQEFKAETSAVKEQEQLDEAQGLLK 3
           D EGS+  +V+      +Q+ D++ K E + + KKQQE K + S +K Q+QLDEAQGLLK
Sbjct: 213 DQEGSQSVNVDAPSSSDTQSNDSEIKVETISNQKKQQEHKGDASPMKLQDQLDEAQGLLK 272


>ref|XP_002280503.1| PREDICTED: golgin candidate 1-like [Vitis vinifera]
          Length = 694

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 2/180 (1%)
 Frame = -1

Query: 536 SSENGGDVGSNEI-QTSKELQMDLRHDGTTPEISLPDSLPNEVEENDGASKVESLPTVND 360
           S EN     SN   Q + E   +   D +   I   ++LPN++ + + A   E  PTV D
Sbjct: 77  SFENDETTSSNSTAQANNEQLQNGNKDASVFGIPSLETLPNDMVKPE-ADLPEVAPTVTD 135

Query: 359 LEADSPTK-GESITEKTIDEGKEPFALDLLDTGVDTIDRDLPADAGQDIKTENEGTSQKI 183
           +EA + T  GE + +K      +P +      GV+ +  D P +AGQ+IK+ +     +I
Sbjct: 136 VEAIASTSNGELVNDKADANEGQPTSFSPT-AGVEIVSEDHPVEAGQNIKSRDADVPSQI 194

Query: 182 DDEGSELGSVETHVHYHSQAKDADTKEEPLLDSKKQQEFKAETSAVKEQEQLDEAQGLLK 3
           D EGS+  +V+      +Q+ D++ K E + + KKQQE K + S +K Q+QLDEAQGLLK
Sbjct: 195 DQEGSQSVNVDAPSSSDTQSNDSEIKVETISNQKKQQEHKGDASPMKLQDQLDEAQGLLK 254


>emb|CAN71156.1| hypothetical protein VITISV_036760 [Vitis vinifera]
          Length = 1793

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 2/180 (1%)
 Frame = -1

Query: 536 SSENGGDVGSNEI-QTSKELQMDLRHDGTTPEISLPDSLPNEVEENDGASKVESLPTVND 360
           S EN     SN   Q + E   +   D     I   ++LPN++ + + A   E  PTV D
Sbjct: 86  SFENDETTSSNSTAQANNEQLQNGNKDAFVFGIPSLETLPNDMVKPE-ADLPEVAPTVTD 144

Query: 359 LEADSPTK-GESITEKTIDEGKEPFALDLLDTGVDTIDRDLPADAGQDIKTENEGTSQKI 183
           +EA + T  GE + +K      +P +L     GV+ +  D P +AGQ+IK+ +     +I
Sbjct: 145 VEAIASTSNGELVNDKADANEGQPTSLSPT-AGVEIVSEDHPVEAGQNIKSRDADVPSQI 203

Query: 182 DDEGSELGSVETHVHYHSQAKDADTKEEPLLDSKKQQEFKAETSAVKEQEQLDEAQGLLK 3
           D EGS+  +V+      +Q+ D++ K E + + KKQ+E K + S +K Q+QLDEAQGLLK
Sbjct: 204 DQEGSQSVNVDAPSSSDTQSNDSEIKVETISNQKKQEEHKGDASPMKLQDQLDEAQGLLK 263


>ref|XP_002514234.1| Golgin-84, putative [Ricinus communis] gi|223546690|gb|EEF48188.1|
           Golgin-84, putative [Ricinus communis]
          Length = 717

 Score = 74.7 bits (182), Expect = 9e-12
 Identities = 64/188 (34%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
 Frame = -1

Query: 551 DTEGLSSENGGDVGSNEI-QTSKELQMDLRHDGTTPEISLPDSLPNEVEENDGASKVESL 375
           D   LS E+     S  I Q   E Q D   D ++  I  P+ L NEV ++D    VE  
Sbjct: 87  DRAALSVEHDTAPTSKSILQVVAEQQQDTDKDASS--IKSPERLANEVVKHD-TDNVEVP 143

Query: 374 PTVNDLEADSPTK-GESITEKTIDEGKE--PFALDLLDTGVDTID-RDLPADAGQDIKTE 207
               D +A + T  GE + EK  D   E  P  L   +  V   D +D P DAG +IK  
Sbjct: 144 VAAADADAKTSTSNGEILNEKAPDGFLEHPPSPLPAKEIEVLNEDHQDHPIDAGVNIKLS 203

Query: 206 NEGTSQKIDDEGSELGSVETHVHYHSQAKDADTKEEPLLDSKKQQEFKAETSAVKEQEQL 27
           +     + D E S+  +++T ++     KDAD K  P+++ +   + KA+ S  K Q+QL
Sbjct: 204 DAEVPLETDQERSQSANIDTPINDEIVLKDADLKANPVVNQQDHHQQKADNSPKKIQDQL 263

Query: 26  DEAQGLLK 3
           +EAQGLLK
Sbjct: 264 EEAQGLLK 271


>ref|XP_003517645.1| PREDICTED: golgin candidate 1-like [Glycine max]
          Length = 703

 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 7/160 (4%)
 Frame = -1

Query: 461 DGTTPEI--SLPDSLPNEVEENDGASKVESLPTVNDLEADSPT---KGESITEKTID--E 303
           D T+P +  SL   L ++V ++D    VE+L  VND +    T    G+++ E   D  E
Sbjct: 112 DATSPLLGSSLSKMLGDDVGKHD-PDDVETL--VNDADIGVATIAANGDTVQESASDVCE 168

Query: 302 GKEPFALDLLDTGVDTIDRDLPADAGQDIKTENEGTSQKIDDEGSELGSVETHVHYHSQA 123
              P A   ++   D      P   GQ IK+ +   S+ +D E SE  + +T  +  +  
Sbjct: 169 MDPPPAPKEIEGPSDE-----PTSTGQIIKSRDLDASKNVDIEKSESVASDTAPNNDTIL 223

Query: 122 KDADTKEEPLLDSKKQQEFKAETSAVKEQEQLDEAQGLLK 3
           KD+D K E ++D K Q++ K + S  K Q+QLDEAQGLLK
Sbjct: 224 KDSDVKLESVVDEKSQEDHKTDISPKKVQDQLDEAQGLLK 263


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