BLASTX nr result

ID: Coptis25_contig00019745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019745
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282834.1| PREDICTED: uncharacterized protein LOC100267...   127   1e-27
ref|XP_002523266.1| conserved hypothetical protein [Ricinus comm...   122   3e-26
gb|ABK96262.1| unknown [Populus trichocarpa x Populus deltoides]      119   5e-25
ref|XP_004146244.1| PREDICTED: uncharacterized protein LOC101221...   116   2e-24
ref|XP_002885068.1| hypothetical protein ARALYDRAFT_478942 [Arab...   111   9e-23

>ref|XP_002282834.1| PREDICTED: uncharacterized protein LOC100267434 [Vitis vinifera]
           gi|302142945|emb|CBI20240.3| unnamed protein product
           [Vitis vinifera]
          Length = 277

 Score =  127 bits (320), Expect = 1e-27
 Identities = 86/197 (43%), Positives = 103/197 (52%), Gaps = 9/197 (4%)
 Frame = -1

Query: 565 HFPC---------KPNTLLSFPPQLQTKPCLLLAQLTEQPTTTTADGPVELPPSPTSIFA 413
           H PC         +P +L      L+T+   LLAQ+ +  TT   +GP+ELPPS +SIFA
Sbjct: 20  HNPCLSPPFCSLSRPTSLHLVSAHLRTRAEPLLAQVPDTTTTAPEEGPIELPPSSSSIFA 79

Query: 412 TTDDPTPLQVXXXXXXXXXXXXXXXXXXXTSVLLTGAISVXXXXXXXXXXXXXKELKYRS 233
           T DDPTPLQV                   TSVLLTGAISV             KEL++RS
Sbjct: 80  TNDDPTPLQV------------------ATSVLLTGAISVFLFRSIRRRVKRAKELRFRS 121

Query: 232 DGVKKSIKEEALDNLKGMKLATEDXXXXXXXXXXXXXXXXXXXXXXXLYKFATTVEAGLN 53
            GVKK++KEEALD+LK M   +                         LYKF  T+EA LN
Sbjct: 122 SGVKKTLKEEALDSLKAMGSGSV-KAAPPSPVQALLGGITAGVIALILYKFTITIEASLN 180

Query: 52  RQVISDNFSVRQITITI 2
           RQ +SDNFSVRQITITI
Sbjct: 181 RQTVSDNFSVRQITITI 197


>ref|XP_002523266.1| conserved hypothetical protein [Ricinus communis]
           gi|223537479|gb|EEF39105.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 285

 Score =  122 bits (307), Expect = 3e-26
 Identities = 84/192 (43%), Positives = 101/192 (52%), Gaps = 8/192 (4%)
 Frame = -1

Query: 553 KPNTLLSFPPQLQTKPCLLLAQLTEQPTTTTA-------DGPVELP-PSPTSIFATTDDP 398
           KP +L +F     +KP + LA    +PT  T        DGP+ELP PS  SIFATTDDP
Sbjct: 35  KPTSLSTFSALPPSKPDIWLAS---EPTPVTPPSPSPEEDGPIELPFPSSPSIFATTDDP 91

Query: 397 TPLQVXXXXXXXXXXXXXXXXXXXTSVLLTGAISVXXXXXXXXXXXXXKELKYRSDGVKK 218
           +P+QV                   TSVLLTG+I V             KELK+RS G KK
Sbjct: 92  SPIQVA------------------TSVLLTGSIGVFLFRALRRRAKRAKELKFRSSGAKK 133

Query: 217 SIKEEALDNLKGMKLATEDXXXXXXXXXXXXXXXXXXXXXXXLYKFATTVEAGLNRQVIS 38
           ++KEEALD+LK M  A+ D                       LYKF TT+EA LNRQ +S
Sbjct: 134 TMKEEALDSLKAMGSASIDAQKPPSPLQTFLGGVSAAVIALILYKFTTTIEAALNRQTVS 193

Query: 37  DNFSVRQITITI 2
           DNFSVRQITIT+
Sbjct: 194 DNFSVRQITITV 205


>gb|ABK96262.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 238

 Score =  119 bits (297), Expect = 5e-25
 Identities = 78/179 (43%), Positives = 94/179 (52%)
 Frame = -1

Query: 538 LSFPPQLQTKPCLLLAQLTEQPTTTTADGPVELPPSPTSIFATTDDPTPLQVXXXXXXXX 359
           LS  P+ +  P L LAQL EQ      +GP+E+  S  SIFAT+DDP+ +QV        
Sbjct: 45  LSALPRSRPDPPLWLAQLPEQAPEPEEEGPIEILRSSPSIFATSDDPSSIQVA------- 97

Query: 358 XXXXXXXXXXXTSVLLTGAISVXXXXXXXXXXXXXKELKYRSDGVKKSIKEEALDNLKGM 179
                      TSVLLTGAISV             KELK+RS G KK++KEEALD+LK  
Sbjct: 98  -----------TSVLLTGAISVFLFRSLRRRAKRSKELKFRSSGAKKTLKEEALDSLKTF 146

Query: 178 KLATEDXXXXXXXXXXXXXXXXXXXXXXXLYKFATTVEAGLNRQVISDNFSVRQITITI 2
             A  D                       LYKF TT+EA LNRQ +SDNFSVRQIT+T+
Sbjct: 147 GSAPIDVKKPPSPVQAFLGAISAGVIALILYKFTTTIEASLNRQTVSDNFSVRQITVTV 205


>ref|XP_004146244.1| PREDICTED: uncharacterized protein LOC101221005 [Cucumis sativus]
           gi|449495512|ref|XP_004159863.1| PREDICTED:
           uncharacterized LOC101221005 [Cucumis sativus]
          Length = 282

 Score =  116 bits (291), Expect = 2e-24
 Identities = 82/186 (44%), Positives = 95/186 (51%), Gaps = 2/186 (1%)
 Frame = -1

Query: 553 KPNTLLSFPPQLQTKPCLLLAQLTEQPTTTTAD--GPVELPPSPTSIFATTDDPTPLQVX 380
           +P T  S  P L    C  L Q T+    T  D  GPVELPP+   IFATTDDP+ LQV 
Sbjct: 39  RPITFHSVSP-LTNHRCFCLPQFTDLADATFLDDNGPVELPPT---IFATTDDPSSLQVA 94

Query: 379 XXXXXXXXXXXXXXXXXXTSVLLTGAISVXXXXXXXXXXXXXKELKYRSDGVKKSIKEEA 200
                             TSVLLTGAISV             KELK+RS GVKKS+KEEA
Sbjct: 95  ------------------TSVLLTGAISVFLFRSLRRRAKRVKELKFRSGGVKKSLKEEA 136

Query: 199 LDNLKGMKLATEDXXXXXXXXXXXXXXXXXXXXXXXLYKFATTVEAGLNRQVISDNFSVR 20
           +D+LK +     +                       LYKF TT+EA LNRQ +SDNFSVR
Sbjct: 137 MDSLKAISTGPIESKSTPSPIQAFLGAIAAGVIALILYKFTTTIEASLNRQTVSDNFSVR 196

Query: 19  QITITI 2
           Q+TITI
Sbjct: 197 QLTITI 202


>ref|XP_002885068.1| hypothetical protein ARALYDRAFT_478942 [Arabidopsis lyrata subsp.
           lyrata] gi|297330908|gb|EFH61327.1| hypothetical protein
           ARALYDRAFT_478942 [Arabidopsis lyrata subsp. lyrata]
          Length = 261

 Score =  111 bits (277), Expect = 9e-23
 Identities = 73/160 (45%), Positives = 85/160 (53%), Gaps = 8/160 (5%)
 Frame = -1

Query: 457 DGPVELPPSPTS-------IFATTDDPTPLQVXXXXXXXXXXXXXXXXXXXTSVLLTGAI 299
           DGP+ELPPS TS       IFAT+DDPTPLQ+                   TSVLLTGAI
Sbjct: 57  DGPIELPPSSTSPFSSTNSIFATSDDPTPLQLA------------------TSVLLTGAI 98

Query: 298 SVXXXXXXXXXXXXXKELKYRSDGVKKSIKEEALDNLKGM-KLATEDXXXXXXXXXXXXX 122
           +V             KEL++RS G KKS+KEEA+DNLK +     E              
Sbjct: 99  TVFLIRSVRRRAKRAKELRFRSTGAKKSLKEEAMDNLKALGSTPIEGGNSTPSAAQAFLG 158

Query: 121 XXXXXXXXXXLYKFATTVEAGLNRQVISDNFSVRQITITI 2
                     LYKF  TVE+GLNRQ ISDNFSVRQIT+T+
Sbjct: 159 AIAAGVIALILYKFTVTVESGLNRQTISDNFSVRQITVTV 198


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