BLASTX nr result
ID: Coptis25_contig00019735
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00019735 (363 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524370.1| ATP-dependent RNA and DNA helicase, putative... 218 5e-55 ref|NP_198800.1| putative ATP-dependent RNA helicase [Arabidopsi... 213 2e-53 dbj|BAB10208.1| mitochondrial RNA helicase-like protein [Arabido... 213 2e-53 ref|XP_002870752.1| hypothetical protein ARALYDRAFT_356016 [Arab... 212 3e-53 ref|XP_002324050.1| predicted protein [Populus trichocarpa] gi|2... 212 3e-53 >ref|XP_002524370.1| ATP-dependent RNA and DNA helicase, putative [Ricinus communis] gi|223536331|gb|EEF37981.1| ATP-dependent RNA and DNA helicase, putative [Ricinus communis] Length = 820 Score = 218 bits (554), Expect = 5e-55 Identities = 101/121 (83%), Positives = 113/121 (93%) Frame = +1 Query: 1 FMEAKKGIYCGPLRLLAVEIFDKVNSLGVSCSLLTGQEKKTVPFANHVACTVEMVSTYEA 180 FMEAKKG+YC PLRLLA+E+FDKVN+ GV CSL TGQEKKTVPFANHVACTVEMVS+ E Sbjct: 328 FMEAKKGVYCSPLRLLAMEVFDKVNAHGVYCSLYTGQEKKTVPFANHVACTVEMVSSDEL 387 Query: 181 YEVAILDEIQMMADSFRGYAWTRALLGLKADEIHLCGDPSVLEIVRKLCAETGDELVENH 360 Y+VA++DEIQMM D+FRGYAWTRALLGLKADEIHLCGDPSVL IVRK+C+ETGDEL+ENH Sbjct: 388 YDVAVIDEIQMMGDAFRGYAWTRALLGLKADEIHLCGDPSVLNIVRKICSETGDELIENH 447 Query: 361 Y 363 Y Sbjct: 448 Y 448 >ref|NP_198800.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana] gi|332007099|gb|AED94482.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana] Length = 776 Score = 213 bits (541), Expect = 2e-53 Identities = 100/121 (82%), Positives = 112/121 (92%) Frame = +1 Query: 1 FMEAKKGIYCGPLRLLAVEIFDKVNSLGVSCSLLTGQEKKTVPFANHVACTVEMVSTYEA 180 FMEAK G+YC PLRLLA+E+FDKVN+LG+ CSLLTGQEKK VPFANHV+CTVEMVST E Sbjct: 295 FMEAKNGLYCSPLRLLAMEVFDKVNALGIYCSLLTGQEKKYVPFANHVSCTVEMVSTDEL 354 Query: 181 YEVAILDEIQMMADSFRGYAWTRALLGLKADEIHLCGDPSVLEIVRKLCAETGDELVENH 360 YEVA+LDEIQMMAD RG+AWT+ALLGLKADEIHLCGDPSVL+IVRK+CA+TGDELVE H Sbjct: 355 YEVAVLDEIQMMADPSRGHAWTKALLGLKADEIHLCGDPSVLDIVRKMCADTGDELVEEH 414 Query: 361 Y 363 Y Sbjct: 415 Y 415 >dbj|BAB10208.1| mitochondrial RNA helicase-like protein [Arabidopsis thaliana] Length = 769 Score = 213 bits (541), Expect = 2e-53 Identities = 100/121 (82%), Positives = 112/121 (92%) Frame = +1 Query: 1 FMEAKKGIYCGPLRLLAVEIFDKVNSLGVSCSLLTGQEKKTVPFANHVACTVEMVSTYEA 180 FMEAK G+YC PLRLLA+E+FDKVN+LG+ CSLLTGQEKK VPFANHV+CTVEMVST E Sbjct: 295 FMEAKNGLYCSPLRLLAMEVFDKVNALGIYCSLLTGQEKKYVPFANHVSCTVEMVSTDEL 354 Query: 181 YEVAILDEIQMMADSFRGYAWTRALLGLKADEIHLCGDPSVLEIVRKLCAETGDELVENH 360 YEVA+LDEIQMMAD RG+AWT+ALLGLKADEIHLCGDPSVL+IVRK+CA+TGDELVE H Sbjct: 355 YEVAVLDEIQMMADPSRGHAWTKALLGLKADEIHLCGDPSVLDIVRKMCADTGDELVEEH 414 Query: 361 Y 363 Y Sbjct: 415 Y 415 >ref|XP_002870752.1| hypothetical protein ARALYDRAFT_356016 [Arabidopsis lyrata subsp. lyrata] gi|297316588|gb|EFH47011.1| hypothetical protein ARALYDRAFT_356016 [Arabidopsis lyrata subsp. lyrata] Length = 777 Score = 212 bits (539), Expect = 3e-53 Identities = 99/121 (81%), Positives = 112/121 (92%) Frame = +1 Query: 1 FMEAKKGIYCGPLRLLAVEIFDKVNSLGVSCSLLTGQEKKTVPFANHVACTVEMVSTYEA 180 FMEAK G+YC PLRLLA+E+FDKVN+LG+ CSLLTGQEKK VPFANHV+CTVEMVST E Sbjct: 295 FMEAKNGLYCSPLRLLAMEVFDKVNALGIYCSLLTGQEKKHVPFANHVSCTVEMVSTDEL 354 Query: 181 YEVAILDEIQMMADSFRGYAWTRALLGLKADEIHLCGDPSVLEIVRKLCAETGDELVENH 360 YEVA++DEIQMMAD RG+AWT+ALLGLKADEIHLCGDPSVL+IVRK+CA+TGDELVE H Sbjct: 355 YEVAVIDEIQMMADPSRGHAWTKALLGLKADEIHLCGDPSVLDIVRKMCADTGDELVEEH 414 Query: 361 Y 363 Y Sbjct: 415 Y 415 >ref|XP_002324050.1| predicted protein [Populus trichocarpa] gi|222867052|gb|EEF04183.1| predicted protein [Populus trichocarpa] Length = 439 Score = 212 bits (539), Expect = 3e-53 Identities = 99/121 (81%), Positives = 111/121 (91%) Frame = +1 Query: 1 FMEAKKGIYCGPLRLLAVEIFDKVNSLGVSCSLLTGQEKKTVPFANHVACTVEMVSTYEA 180 FMEAKKGIYC PLRLLA+E+FDKVN+LGV CSL TGQEKK VPF+NH+ACTVEMVST E Sbjct: 24 FMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLYTGQEKKHVPFSNHIACTVEMVSTEEL 83 Query: 181 YEVAILDEIQMMADSFRGYAWTRALLGLKADEIHLCGDPSVLEIVRKLCAETGDELVENH 360 Y+VA++DEIQMMADS RGYAWTRALLGLKADEIHLCGDPSVL+IV+ +C+ETGDEL E H Sbjct: 84 YDVAVIDEIQMMADSCRGYAWTRALLGLKADEIHLCGDPSVLDIVKNICSETGDELYEQH 143 Query: 361 Y 363 Y Sbjct: 144 Y 144