BLASTX nr result

ID: Coptis25_contig00019712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019712
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81779.1| hypothetical protein VITISV_034284 [Vitis vinifera]    55   4e-06
ref|XP_004146083.1| PREDICTED: probable LRR receptor-like serine...    55   8e-06

>emb|CAN81779.1| hypothetical protein VITISV_034284 [Vitis vinifera]
          Length = 970

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 23/45 (51%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
 Frame = -1

Query: 210 YYNLFVDCGGSGLSFEGEQYDPDLDGMGPSSFF-HTDKWACSTTG 79
           YY+LF++CGGS +++EG  Y+ DLDG G S F  +++KW  S+TG
Sbjct: 358 YYSLFINCGGSEINYEGNDYERDLDGSGASHFSDYSEKWGYSSTG 402


>ref|XP_004146083.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53440-like [Cucumis sativus]
           gi|449521066|ref|XP_004167552.1| PREDICTED: probable LRR
           receptor-like serine/threonine-protein kinase
           At1g53440-like [Cucumis sativus]
          Length = 1012

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
 Frame = -1

Query: 210 YYNLFVDCGGSGLSFEGEQYDPDLDGMGPSSFF-HTDKWACSTTGDY-GYGIVVFREPTT 37
           +++LF++CGG  +  +G  Y+ D+   G S+F   +D+WA S+TG + G     +R  +T
Sbjct: 407 FHSLFINCGGQRMEVDGNDYEEDVTPGGKSNFLSFSDRWAYSSTGVFLGDENANYRATST 466

Query: 36  NNSAGNLYSTAR 1
           N+S  N+Y TAR
Sbjct: 467 NSSIPNIYQTAR 478


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