BLASTX nr result

ID: Coptis25_contig00019709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019709
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299478.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
gb|ACT54546.1| endo-1,4-beta-glucanase [Dimocarpus longan]            112   3e-23
dbj|BAC22691.1| endo-1,4-beta-D-glucanase [Pyrus communis]            112   3e-23
ref|XP_004149748.1| PREDICTED: endoglucanase 6-like [Cucumis sat...   110   1e-22
gb|AFZ78641.1| korrigan [Populus tomentosa]                           110   2e-22

>ref|XP_002299478.1| predicted protein [Populus trichocarpa] gi|222846736|gb|EEE84283.1|
           predicted protein [Populus trichocarpa]
           gi|347466587|gb|AEO97206.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|347466641|gb|AEO97233.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
          Length = 622

 Score =  113 bits (282), Expect = 2e-23
 Identities = 53/60 (88%), Positives = 54/60 (90%)
 Frame = +1

Query: 310 PYTLAGHDYGQALSNSILFFEAQRSGYLPSTQRVKWRSNSGLQDGKASGVDLVGGYYDAG 489
           P+ LAGHDYGQALS SILFFEAQRSGYLP  QRV WRSNSGL DGKASGVDLVGGYYDAG
Sbjct: 20  PFALAGHDYGQALSKSILFFEAQRSGYLPHNQRVTWRSNSGLNDGKASGVDLVGGYYDAG 79


>gb|ACT54546.1| endo-1,4-beta-glucanase [Dimocarpus longan]
          Length = 546

 Score =  112 bits (280), Expect = 3e-23
 Identities = 52/60 (86%), Positives = 55/60 (91%)
 Frame = +1

Query: 310 PYTLAGHDYGQALSNSILFFEAQRSGYLPSTQRVKWRSNSGLQDGKASGVDLVGGYYDAG 489
           P+TLAGHDYGQAL+ SILFFEAQRSGYLP  QRV WR+NSGL DGKASGVDLVGGYYDAG
Sbjct: 15  PHTLAGHDYGQALTKSILFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAG 74


>dbj|BAC22691.1| endo-1,4-beta-D-glucanase [Pyrus communis]
          Length = 620

 Score =  112 bits (280), Expect = 3e-23
 Identities = 52/60 (86%), Positives = 55/60 (91%)
 Frame = +1

Query: 310 PYTLAGHDYGQALSNSILFFEAQRSGYLPSTQRVKWRSNSGLQDGKASGVDLVGGYYDAG 489
           P+ LAGHDYGQALSNSILFFEAQRSG+LP  QRV WRSNSGL DGKA+GVDLVGGYYDAG
Sbjct: 20  PFALAGHDYGQALSNSILFFEAQRSGFLPPNQRVTWRSNSGLYDGKANGVDLVGGYYDAG 79


>ref|XP_004149748.1| PREDICTED: endoglucanase 6-like [Cucumis sativus]
           gi|449505061|ref|XP_004162365.1| PREDICTED:
           endoglucanase 6-like [Cucumis sativus]
          Length = 619

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/60 (85%), Positives = 54/60 (90%)
 Frame = +1

Query: 310 PYTLAGHDYGQALSNSILFFEAQRSGYLPSTQRVKWRSNSGLQDGKASGVDLVGGYYDAG 489
           P  LAGHDYGQAL+ S+LFFEAQRSGYLP  QRV WR+NSGLQDGKASGVDLVGGYYDAG
Sbjct: 17  PSALAGHDYGQALTKSLLFFEAQRSGYLPHNQRVNWRANSGLQDGKASGVDLVGGYYDAG 76


>gb|AFZ78641.1| korrigan [Populus tomentosa]
          Length = 622

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/60 (86%), Positives = 53/60 (88%)
 Frame = +1

Query: 310 PYTLAGHDYGQALSNSILFFEAQRSGYLPSTQRVKWRSNSGLQDGKASGVDLVGGYYDAG 489
           P+ LA HDYGQALS SILFFEAQRSGYLP  QRV WRSNSGL DGKASGVDLVGGYYDAG
Sbjct: 20  PFALARHDYGQALSKSILFFEAQRSGYLPHNQRVTWRSNSGLNDGKASGVDLVGGYYDAG 79


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