BLASTX nr result

ID: Coptis25_contig00019703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019703
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001057807.1| Os06g0542200 [Oryza sativa Japonica Group] g...   101   7e-20
gb|EEC80772.1| hypothetical protein OsI_23283 [Oryza sativa Indi...    99   5e-19
ref|XP_003560706.1| PREDICTED: arogenate dehydrogenase 1, chloro...    95   7e-18
ref|XP_002530754.1| prephenate dehydrogenase, putative [Ricinus ...    89   3e-16
ref|XP_002331058.1| arogenate dehydrogenase [Populus trichocarpa...    88   8e-16

>ref|NP_001057807.1| Os06g0542200 [Oryza sativa Japonica Group]
           gi|53793078|dbj|BAD54288.1| putative arogenate
           dehydrogenase isoform 2 [Oryza sativa Japonica Group]
           gi|113595847|dbj|BAF19721.1| Os06g0542200 [Oryza sativa
           Japonica Group] gi|215765048|dbj|BAG86745.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222635711|gb|EEE65843.1| hypothetical protein
           OsJ_21611 [Oryza sativa Japonica Group]
          Length = 342

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/74 (66%), Positives = 60/74 (81%)
 Frame = -2

Query: 364 ESTPINTKNYETLMELTHTTVSHSSDLFDGLFLYNLNAMEQIEKLDRAFETVKQNLFGKL 185
           ESTPINTK YETL++LT  T+S S DL+ GLF+YN+NA EQI+ LDRAFE VKQ L+G+L
Sbjct: 268 ESTPINTKGYETLLQLTKNTISDSFDLYYGLFMYNVNATEQIDNLDRAFEKVKQMLYGRL 327

Query: 184 RSTLRTQIEEKVTI 143
            + LR QIEE+V I
Sbjct: 328 HNVLRKQIEERVPI 341


>gb|EEC80772.1| hypothetical protein OsI_23283 [Oryza sativa Indica Group]
          Length = 342

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/74 (64%), Positives = 59/74 (79%)
 Frame = -2

Query: 364 ESTPINTKNYETLMELTHTTVSHSSDLFDGLFLYNLNAMEQIEKLDRAFETVKQNLFGKL 185
           ESTPINTK YETL++LT  T+S S DL+ GLF+YN+NA EQI+ LDRAFE VKQ L+G+L
Sbjct: 268 ESTPINTKGYETLLQLTKNTISDSFDLYYGLFMYNVNATEQIDNLDRAFEKVKQMLYGRL 327

Query: 184 RSTLRTQIEEKVTI 143
            + LR QI E+V I
Sbjct: 328 HNVLRKQIVERVPI 341


>ref|XP_003560706.1| PREDICTED: arogenate dehydrogenase 1, chloroplastic-like
           [Brachypodium distachyon]
          Length = 361

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 47/74 (63%), Positives = 58/74 (78%)
 Frame = -2

Query: 364 ESTPINTKNYETLMELTHTTVSHSSDLFDGLFLYNLNAMEQIEKLDRAFETVKQNLFGKL 185
           +STPINTK +E L++LT  TVS S DL+ GLF+YN+NA EQIEKL+RAFE VKQ L+G+L
Sbjct: 288 KSTPINTKGFEALLKLTENTVSDSFDLYYGLFMYNVNATEQIEKLERAFEKVKQMLYGRL 347

Query: 184 RSTLRTQIEEKVTI 143
              LR QI E+V I
Sbjct: 348 HDILRKQIVERVPI 361


>ref|XP_002530754.1| prephenate dehydrogenase, putative [Ricinus communis]
           gi|223529670|gb|EEF31614.1| prephenate dehydrogenase,
           putative [Ricinus communis]
          Length = 690

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/70 (60%), Positives = 53/70 (75%)
 Frame = -2

Query: 364 ESTPINTKNYETLMELTHTTVSHSSDLFDGLFLYNLNAMEQIEKLDRAFETVKQNLFGKL 185
           ESTPINTK YETL+ L   T   S DL+ GLF+YN+NAMEQ+E+LD AFE++K+ LFG+L
Sbjct: 587 ESTPINTKGYETLLNLVENTAGDSFDLYYGLFMYNVNAMEQLERLDLAFESLKKQLFGRL 646

Query: 184 RSTLRTQIEE 155
              LR Q+ E
Sbjct: 647 HGVLRKQLFE 656



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/68 (52%), Positives = 49/68 (72%)
 Frame = -2

Query: 364 ESTPINTKNYETLMELTHTTVSHSSDLFDGLFLYNLNAMEQIEKLDRAFETVKQNLFGKL 185
           ESTPINTK YE+L+ L   T   S DL+ GLF+YN NA+E +E+LD AFE +++ LFG+L
Sbjct: 270 ESTPINTKGYESLLGLVENTAEDSFDLYYGLFMYNKNALEMLERLDLAFEALRKQLFGRL 329

Query: 184 RSTLRTQI 161
              +R Q+
Sbjct: 330 HDVVRKQL 337


>ref|XP_002331058.1| arogenate dehydrogenase [Populus trichocarpa]
           gi|222872988|gb|EEF10119.1| arogenate dehydrogenase
           [Populus trichocarpa]
          Length = 653

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/68 (58%), Positives = 51/68 (75%)
 Frame = -2

Query: 364 ESTPINTKNYETLMELTHTTVSHSSDLFDGLFLYNLNAMEQIEKLDRAFETVKQNLFGKL 185
           ESTP+NTK YETL+ L   T   S DL+ GLF+YN+NAMEQ+E+LD AFE++K  LFG+L
Sbjct: 547 ESTPVNTKGYETLLNLVENTAGDSFDLYYGLFMYNVNAMEQLERLDLAFESLKDQLFGRL 606

Query: 184 RSTLRTQI 161
              LR Q+
Sbjct: 607 HGVLRKQL 614



 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 35/68 (51%), Positives = 49/68 (72%)
 Frame = -2

Query: 364 ESTPINTKNYETLMELTHTTVSHSSDLFDGLFLYNLNAMEQIEKLDRAFETVKQNLFGKL 185
           ESTPINTK YE+L++L   T   S DL+ GLF+YN N +E +E+LD AFE +++ LFG+L
Sbjct: 229 ESTPINTKGYESLLDLVENTSGDSFDLYYGLFMYNRNVLEMLERLDLAFEDLRKQLFGRL 288

Query: 184 RSTLRTQI 161
              +R Q+
Sbjct: 289 HEVVRKQL 296


Top