BLASTX nr result
ID: Coptis25_contig00019700
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00019700 (748 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002874080.1| hypothetical protein ARALYDRAFT_489122 [Arab... 77 4e-12 ref|XP_003613721.1| F-box/LRR-repeat protein [Medicago truncatul... 75 2e-11 ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2... 72 1e-10 emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] 72 1e-10 sp|Q9FJU2.2|FBD37_ARATH RecName: Full=Putative FBD-associated F-... 71 2e-10 >ref|XP_002874080.1| hypothetical protein ARALYDRAFT_489122 [Arabidopsis lyrata subsp. lyrata] gi|297319917|gb|EFH50339.1| hypothetical protein ARALYDRAFT_489122 [Arabidopsis lyrata subsp. lyrata] Length = 390 Score = 77.0 bits (188), Expect = 4e-12 Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 3/226 (1%) Frame = -2 Query: 717 WILGSIQCNVQELNINISTFYSLH---LPSCLFECKPLKVLKLKFGSIQVPLKLRPWFFY 547 WI ++ VQ+L+I + L +P L+ C+ L LKL + S+ P F Y Sbjct: 49 WIHNAVMLEVQDLDILSCGWSYLGTELMPLSLYTCETLVSLKLHYVSL-------PDFDY 101 Query: 546 PGDIALPNLKTLHLESVCFVGEELANKLFSNCPVLESLVIINSQFVKLKSFLIIGPNLKH 367 ++LP LK +HLE + + L L S+CPVLE L + +K + +LK Sbjct: 102 ---VSLPRLKIMHLEDNIYPNDALLENLISSCPVLEDLNVSRDLENIVKVLRVCSLSLKS 158 Query: 366 IVIENCSDELDVDSSYCEIIIHASKLVALSCKDHMDRHYTLEMPCSLVDVSMDMGIEDLR 187 +++ D D + E++I A L LS +D + + L S V +D+ + +R Sbjct: 159 LILVLDGDRYIEDDGW-EVVIDAPGLSYLSLRDDQSKSFVLSSLSSPTKVDIDISFDSVR 217 Query: 186 GWLRGGRLQTERKKQYALNMLTYLKSVCSVRSLTLSPWLIEVFSNN 49 LR L K+ N T L SVR +T+S ++V S + Sbjct: 218 SVLRNVSL----KRSVVRNFFTRLS---SVRDMTMSGTTLKVLSRS 256 >ref|XP_003613721.1| F-box/LRR-repeat protein [Medicago truncatula] gi|355515056|gb|AES96679.1| F-box/LRR-repeat protein [Medicago truncatula] Length = 703 Score = 74.7 bits (182), Expect = 2e-11 Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 1/196 (0%) Frame = -2 Query: 663 TFYSLHLPSCLFECKPLKVLKLKFGSIQVPLKLRPWFFYPGDIALPNLKTLHLESVCFVG 484 TF LP+ + L L L+FG I + P I PNLKTL+L + F Sbjct: 145 TFARFVLPNNFSASQSLNKLCLEFGFI---------LYIPDGIRFPNLKTLYLSHLSFAN 195 Query: 483 EELANKLFSNCPVLESLVIINSQFVKLKSFLIIGPNLKHIVIE-NCSDELDVDSSYCEII 307 E+ A +L S CPVL+ L + ++ ++ + L+ + IE N D D+ I Sbjct: 196 EKSAQRLLSGCPVLQELTLYKFFWLNIEQINVAISTLRKLTIELNHFDPSDLRIRSFTIK 255 Query: 306 IHASKLVALSCKDHMDRHYTLEMPCSLVDVSMDMGIEDLRGWLRGGRLQTERKKQYALNM 127 + L++LS H + L P S+VD +D+ DL+ Q + Q+A+ + Sbjct: 256 FDVANLLSLSYTAHPIIKFVLVNPTSIVDACIDLRCYDLQN-------QQQNTTQFAIEL 308 Query: 126 LTYLKSVCSVRSLTLS 79 L+ L SV+SLT+S Sbjct: 309 LSRLG---SVKSLTIS 321 >ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1| predicted protein [Populus trichocarpa] Length = 378 Score = 72.0 bits (175), Expect = 1e-10 Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 11/211 (5%) Frame = -2 Query: 645 LPSCLFECKPLKVLKLKF-GSIQVPLKLRPWFFYPGDIALPNLKTLHLESVCFVGEELAN 469 LP C F C+ L+ LKL+ G I +P L LP+LKTLHL + Sbjct: 141 LPRCFFNCESLRSLKLRIDGGIALPKSL----------GLPSLKTLHLGGA----QNFDG 186 Query: 468 KLFSNCPVLESLVIINSQFVKLKSFLIIGPNLKHIVIENCSDELDVDSSYCEIIIHASKL 289 K+FS+CP LE+L I + +++F I NLK + I N + C++++ A KL Sbjct: 187 KIFSSCPNLENLTIEDICLNTIENFNIHALNLKSLEILNWRYSRIMRG--CKVMLFAPKL 244 Query: 288 VALSCKDHMDRHYTLEMPCSLVDVSMDMG----------IEDLRGWLRGGRLQTERKKQY 139 + + ++ SL DV++ + D ++ G + E K+ + Sbjct: 245 TSFKFDGNTPLFWSEVNLTSLDDVNVVLQRYYYRHDYQFYVDEDEYISG---EDETKQGF 301 Query: 138 ALNMLTYLKSVCSVRSLTLSPWLIEVFSNNP 46 L++L L CS +SLTLS +IEV S P Sbjct: 302 CLDLLKMLHQFCSAKSLTLSMNIIEVLSKVP 332 >emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera] Length = 607 Score = 72.0 bits (175), Expect = 1e-10 Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 4/176 (2%) Frame = -2 Query: 720 SWILGSIQCNVQELNINISTFYSLHLPSCLFECKPLKVLKLKFGSIQVPLKLRPWFFYPG 541 SWI +++ VQEL++++ + + LP F CK L V+KL + P Sbjct: 108 SWICIALERRVQELDLHLLIDWRVELPPMFFICKTLVVVKLSCAL---------FLDIPT 158 Query: 540 DIALPNLKTLHLESVCFVGEELANKLFSNCPVLESLVIINSQFVKLKSFLIIGPNLKHIV 361 + LP+LK LHL+SV + ++ KL S CPVLE LVI + + P+LK + Sbjct: 159 TVWLPSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERDNQWVVNVSNPSLKILR 218 Query: 360 I----ENCSDELDVDSSYCEIIIHASKLVALSCKDHMDRHYTLEMPCSLVDVSMDM 205 I + + + + ++++ A L LS D++ + Y ++ SLV +D+ Sbjct: 219 IFFFTDGFAHPYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFVKDLPSLVKAFIDV 274 >sp|Q9FJU2.2|FBD37_ARATH RecName: Full=Putative FBD-associated F-box protein At5g56700 Length = 398 Score = 71.2 bits (173), Expect = 2e-10 Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 4/136 (2%) Frame = -2 Query: 735 PHRFCSWILGSIQCNVQELNINI-STFYSLHLPSCLFECKPLKVLKLKFGSIQVPLKLRP 559 P SW+ ++ V+EL+I++ T ++ LPS L+ CK L LKL + + + Sbjct: 87 PKDLKSWVRIAVSRCVRELSISLHDTTAAVSLPSSLYTCKSLVTLKLYGKKVLLDV---- 142 Query: 558 WFFYPGDIALPNLKTLHLESVCFVGEELANKLFSNCPVLESLVIINSQFVKLKSFLIIGP 379 P + LP+LKTL LE + + E+ L S CPVLE L I+ + L++ ++I P Sbjct: 143 ----PRTVFLPSLKTLQLERLRYSDEDSLRLLLSYCPVLEDLSIVREDYDNLRALVVIVP 198 Query: 378 NLKHIVIE---NCSDE 340 +L+ + +E NCS + Sbjct: 199 SLQRLSLEIPGNCSSD 214