BLASTX nr result

ID: Coptis25_contig00019692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019692
         (2089 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511290.1| copine, putative [Ricinus communis] gi|22355...   610   e-172
ref|XP_002279018.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   608   e-171
ref|XP_002298557.1| predicted protein [Populus trichocarpa] gi|2...   600   e-169
ref|NP_001240870.1| uncharacterized protein LOC100809850 [Glycin...   599   e-168
ref|XP_002282202.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   598   e-168

>ref|XP_002511290.1| copine, putative [Ricinus communis] gi|223550405|gb|EEF51892.1|
            copine, putative [Ricinus communis]
          Length = 433

 Score =  610 bits (1574), Expect = e-172
 Identities = 301/400 (75%), Positives = 338/400 (84%), Gaps = 6/400 (1%)
 Frame = -2

Query: 1458 YGAPQYHAPPPPNYGALPQ---RKLERRYSRINDDYNSLEQVTDALAQAGLESSNLIVGI 1288
            Y A + +AP P +YG       R+LER+YS+I+D+YNSLEQVTDALA++GLESSNLIVGI
Sbjct: 34   YMAYENYAPAPQSYGGQAPNSGRRLERKYSKIDDNYNSLEQVTDALARSGLESSNLIVGI 93

Query: 1287 DFTKSNEWTGARSFNRKCLHHLADTQNPYEQAISIIGRTLSAFDEDNLIPCFGFGDASTH 1108
            DFTKSNEWTGARSFNR+ LHH+ D QNPYEQAISIIG+TLS+FDEDNLIPCFGFGDASTH
Sbjct: 94   DFTKSNEWTGARSFNRRSLHHIGDDQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTH 153

Query: 1107 DQDVFSFYPDERLCNGFAEALTRYREIVPNLRLAGPTSFAPIIEMATTIVEQNGGQYHVL 928
            DQ+VFSF  DE  CNGF E L RYRE+VP+LRLAGPTSFAPIIEMA TIVEQ+GGQYHVL
Sbjct: 154  DQEVFSFNSDESFCNGFEEVLRRYRELVPHLRLAGPTSFAPIIEMAITIVEQSGGQYHVL 213

Query: 927  LIIADGQVTRSVDTEHGRLSTQEHKTVEAIVKASEYPLSIILVGVGDGPWDMMKEFDDNI 748
            +IIADGQVTRSVDT+HG+LS QE +TVEAIVKASEYPLSIILVGVGDGPWDMMKEFDDNI
Sbjct: 214  VIIADGQVTRSVDTQHGQLSPQEKRTVEAIVKASEYPLSIILVGVGDGPWDMMKEFDDNI 273

Query: 747  PARAFDNFQFVNFTEIMSKNMPISRKETEFALAALMEIPAQYKATVDFNILGSRNGKFVE 568
            PARAFDNFQFVNFTEIMSKN+  S+KE EFALAALMEIP+QY+AT++ +ILGS  GK ++
Sbjct: 274  PARAFDNFQFVNFTEIMSKNVDRSKKEAEFALAALMEIPSQYRATLELSILGSTRGKAID 333

Query: 567  RVPLPPPLYGAAXXXXXXXXXXXXFQHSVPP---YNAQATSRGTAPPESSTFDNKVCPIC 397
            R+PLPPP YGAA            F  S P    YNAQA     APP SST DN +CPIC
Sbjct: 334  RIPLPPPQYGAATLSNSKPSRSSSFHPSAPSSGRYNAQAAGTAPAPPASSTSDNHLCPIC 393

Query: 396  LTNSKDMAFGCGHQTCCECGEDLQLCPICRTPIETRIKLY 277
            LTN+KDMAFGCGHQTCC+CG+DLQLCPICR+ I TRIKLY
Sbjct: 394  LTNAKDMAFGCGHQTCCDCGQDLQLCPICRSSINTRIKLY 433


>ref|XP_002279018.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2 [Vitis vinifera]
            gi|297733667|emb|CBI14914.3| unnamed protein product
            [Vitis vinifera]
          Length = 433

 Score =  608 bits (1569), Expect = e-171
 Identities = 300/394 (76%), Positives = 330/394 (83%)
 Frame = -2

Query: 1458 YGAPQYHAPPPPNYGALPQRKLERRYSRINDDYNSLEQVTDALAQAGLESSNLIVGIDFT 1279
            Y   Q++  PPP YG       +R+YS+I D+YNSL+QVT ALAQAGLESSNLIVGIDFT
Sbjct: 41   YLPQQHYNHPPPTYGGQNPGS-KRKYSKIEDNYNSLDQVTSALAQAGLESSNLIVGIDFT 99

Query: 1278 KSNEWTGARSFNRKCLHHLADTQNPYEQAISIIGRTLSAFDEDNLIPCFGFGDASTHDQD 1099
            KSNEWTGARSF R+ LHH+ D QNPYEQAISIIG+TLS FD+DNLIPCFGFGDASTHD+D
Sbjct: 100  KSNEWTGARSFYRRSLHHVGDDQNPYEQAISIIGKTLSKFDDDNLIPCFGFGDASTHDRD 159

Query: 1098 VFSFYPDERLCNGFAEALTRYREIVPNLRLAGPTSFAPIIEMATTIVEQNGGQYHVLLII 919
            VFSFY DER CNGF E L RYRE+VP+LRLAGPTSFAPI+EMA TIVEQ+GGQYHVLLII
Sbjct: 160  VFSFYSDERFCNGFEEVLKRYRELVPHLRLAGPTSFAPIVEMAITIVEQSGGQYHVLLII 219

Query: 918  ADGQVTRSVDTEHGRLSTQEHKTVEAIVKASEYPLSIILVGVGDGPWDMMKEFDDNIPAR 739
            ADGQVTRSVDTEHG+LS QE +TVEAIVKASEYPLSIILVGVGDGPWDMMKEFDDN+PAR
Sbjct: 220  ADGQVTRSVDTEHGQLSPQEKRTVEAIVKASEYPLSIILVGVGDGPWDMMKEFDDNMPAR 279

Query: 738  AFDNFQFVNFTEIMSKNMPISRKETEFALAALMEIPAQYKATVDFNILGSRNGKFVERVP 559
            AFDNFQFVNFTEIMSKNM  SRKETEFAL+ALMEIP+QYKAT++ NILGS  GK ++RVP
Sbjct: 280  AFDNFQFVNFTEIMSKNMDRSRKETEFALSALMEIPSQYKATMELNILGSHRGKAIDRVP 339

Query: 558  LPPPLYGAAXXXXXXXXXXXXFQHSVPPYNAQATSRGTAPPESSTFDNKVCPICLTNSKD 379
            LPPPLYGA             FQ S P  +  + S  T+ P SS  DN VCPICLTN KD
Sbjct: 340  LPPPLYGANSFSYSKPPQSSSFQPSAPSSDQHSASIHTSAPASSLADNNVCPICLTNKKD 399

Query: 378  MAFGCGHQTCCECGEDLQLCPICRTPIETRIKLY 277
            MAFGCGHQTCCECG DL LCPICR+PI+TRIKLY
Sbjct: 400  MAFGCGHQTCCECGPDLDLCPICRSPIQTRIKLY 433


>ref|XP_002298557.1| predicted protein [Populus trichocarpa] gi|222845815|gb|EEE83362.1|
            predicted protein [Populus trichocarpa]
          Length = 376

 Score =  600 bits (1548), Expect = e-169
 Identities = 295/376 (78%), Positives = 326/376 (86%), Gaps = 1/376 (0%)
 Frame = -2

Query: 1401 RKLERRYSRINDDYNSLEQVTDALAQAGLESSNLIVGIDFTKSNEWTGARSFNRKCLHHL 1222
            R+L+RRYSRI DDY SL QVT+ALA+AGLESSNLIVGIDFTKSNEWTGARS+NR+CLHH+
Sbjct: 1    RRLDRRYSRIADDYKSLHQVTEALARAGLESSNLIVGIDFTKSNEWTGARSYNRRCLHHI 60

Query: 1221 ADTQNPYEQAISIIGRTLSAFDEDNLIPCFGFGDASTHDQDVFSFYPDERLCNGFAEALT 1042
             D  NPYEQAISIIG+TL+AFDEDNLIPCFGFGDASTHDQDVFSFYPDER CNGF E L+
Sbjct: 61   GDGFNPYEQAISIIGKTLAAFDEDNLIPCFGFGDASTHDQDVFSFYPDERFCNGFEEVLS 120

Query: 1041 RYREIVPNLRLAGPTSFAPIIEMATTIVEQNGGQYHVLLIIADGQVTRSVDTEHGRLSTQ 862
            RYREIVPNLRLAGPTSFAPIIEMA TIVEQ+ GQYHVLLIIADGQVTRSVDTEHG+LS Q
Sbjct: 121  RYREIVPNLRLAGPTSFAPIIEMAMTIVEQSAGQYHVLLIIADGQVTRSVDTEHGQLSPQ 180

Query: 861  EHKTVEAIVKASEYPLSIILVGVGDGPWDMMKEFDDNIPARAFDNFQFVNFTEIMSKNMP 682
            E KTVEAIV+AS+ PLSIILVGVGDGPWDMM+EFDDNIPAR FDNFQFVNFTEIMSKN+ 
Sbjct: 181  EQKTVEAIVQASKLPLSIILVGVGDGPWDMMREFDDNIPARDFDNFQFVNFTEIMSKNVD 240

Query: 681  ISRKETEFALAALMEIPAQYKATVDFNILGSRNGKFVERVPLPPPLYGAAXXXXXXXXXX 502
             SRKETEFAL+ALMEIP+QYKAT++ +ILG   G   ERV LPPPLYGAA          
Sbjct: 241  TSRKETEFALSALMEIPSQYKATIELSILGQSKGIVSERVALPPPLYGAASFSSSKPSRP 300

Query: 501  XXFQHSVPPYNAQATSRGTAPPES-STFDNKVCPICLTNSKDMAFGCGHQTCCECGEDLQ 325
              F+ SVP Y   +    +APP + ST+DN++CPICL+NSKDMAFGCGHQTCCECGE LQ
Sbjct: 301  ASFKPSVPSYQRDSQPFSSAPPATCSTYDNQLCPICLSNSKDMAFGCGHQTCCECGETLQ 360

Query: 324  LCPICRTPIETRIKLY 277
            LCPICR+ IETRIKL+
Sbjct: 361  LCPICRSTIETRIKLF 376


>ref|NP_001240870.1| uncharacterized protein LOC100809850 [Glycine max]
            gi|255644673|gb|ACU22839.1| unknown [Glycine max]
          Length = 427

 Score =  599 bits (1544), Expect = e-168
 Identities = 293/397 (73%), Positives = 332/397 (83%), Gaps = 4/397 (1%)
 Frame = -2

Query: 1455 GAPQYHAPPPPNYGA--LPQ--RKLERRYSRINDDYNSLEQVTDALAQAGLESSNLIVGI 1288
            G+  ++   P +YG    P+  + L+R+YSRI DDY SL+QVTDALA+AGLESSNLIVGI
Sbjct: 34   GSVGHYGYSPQSYGGGRAPEQGKSLDRKYSRIGDDYKSLDQVTDALAKAGLESSNLIVGI 93

Query: 1287 DFTKSNEWTGARSFNRKCLHHLADTQNPYEQAISIIGRTLSAFDEDNLIPCFGFGDASTH 1108
            DFTKSNEWTG RSF R+CLHH+   QNPYEQAISIIG+TLS+FDEDNLIPCFGFGDASTH
Sbjct: 94   DFTKSNEWTGGRSFQRRCLHHIGHEQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTH 153

Query: 1107 DQDVFSFYPDERLCNGFAEALTRYREIVPNLRLAGPTSFAPIIEMATTIVEQNGGQYHVL 928
            DQ+VFSFYPDER C GF E L RYRE+VP L+LAGPTSFAP+IEMA TIVEQ+GGQYHVL
Sbjct: 154  DQEVFSFYPDERFCRGFEEVLERYRELVPQLKLAGPTSFAPVIEMAITIVEQSGGQYHVL 213

Query: 927  LIIADGQVTRSVDTEHGRLSTQEHKTVEAIVKASEYPLSIILVGVGDGPWDMMKEFDDNI 748
            +IIADGQVTRSVDTEHG+LS QE KTVEAIVKASEYPLSIILVGVGDGPWDMMK+FDDNI
Sbjct: 214  VIIADGQVTRSVDTEHGQLSAQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMKQFDDNI 273

Query: 747  PARAFDNFQFVNFTEIMSKNMPISRKETEFALAALMEIPAQYKATVDFNILGSRNGKFVE 568
            PARAFDNFQFVNFTEIMSKNM  SRKETEFALAALMEIP+QYKAT++ NILG+  GK ++
Sbjct: 274  PARAFDNFQFVNFTEIMSKNMDRSRKETEFALAALMEIPSQYKATLELNILGACRGKDID 333

Query: 567  RVPLPPPLYGAAXXXXXXXXXXXXFQHSVPPYNAQATSRGTAPPESSTFDNKVCPICLTN 388
            R+PLPPPLYGAA             + S P      +   T PP +S  DN+VCPICLT+
Sbjct: 334  RIPLPPPLYGAASFNSPKTSRQYSSRPSAPSSRHDVS---TNPPATSASDNQVCPICLTD 390

Query: 387  SKDMAFGCGHQTCCECGEDLQLCPICRTPIETRIKLY 277
             KDMAFGCGHQTCC+CG+DL+LCPICR+ I+TRIKLY
Sbjct: 391  PKDMAFGCGHQTCCDCGQDLELCPICRSTIDTRIKLY 427


>ref|XP_002282202.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Vitis vinifera]
            gi|296081383|emb|CBI16816.3| unnamed protein product
            [Vitis vinifera]
          Length = 442

 Score =  598 bits (1541), Expect = e-168
 Identities = 296/400 (74%), Positives = 330/400 (82%), Gaps = 6/400 (1%)
 Frame = -2

Query: 1458 YGAPQYHAPPPPNY---GALPQR--KLERRYSRINDDYNSLEQVTDALAQAGLESSNLIV 1294
            Y  PQ+H+PPPP Y      P R  +L+RRYSRI D+YNSL+QVT ALAQAGLESSNLIV
Sbjct: 42   YHTPQHHSPPPPRYYSGAQTPHRHPQLDRRYSRIADNYNSLDQVTAALAQAGLESSNLIV 101

Query: 1293 GIDFTKSNEWTGARSFNRKCLHHLADTQNPYEQAISIIGRTLSAFDEDNLIPCFGFGDAS 1114
            GIDFTKSNEWTG+RSFNRK LHH+   QNPYEQAISIIG+TLSAFDEDNLIPCFGFGDAS
Sbjct: 102  GIDFTKSNEWTGSRSFNRKSLHHIGRGQNPYEQAISIIGKTLSAFDEDNLIPCFGFGDAS 161

Query: 1113 THDQDVFSFYPDERLCNGFAEALTRYREIVPNLRLAGPTSFAPIIEMATTIVEQNGGQYH 934
            THDQD+FSFY DER CNGF E L RYRE+VP+LRLAGPTSFAPIIEMA+TIVE++GGQYH
Sbjct: 162  THDQDIFSFYQDERPCNGFEEVLMRYRELVPSLRLAGPTSFAPIIEMASTIVEKSGGQYH 221

Query: 933  VLLIIADGQVTRSVDTEHGRLSTQEHKTVEAIVKASEYPLSIILVGVGDGPWDMMKEFDD 754
            VLLIIADGQVTRSVDT+HG+LS+QE KT++AIVKAS+YPLSIILVGVGDGPWD+M+EFDD
Sbjct: 222  VLLIIADGQVTRSVDTQHGQLSSQEQKTIDAIVKASKYPLSIILVGVGDGPWDVMREFDD 281

Query: 753  NIPARAFDNFQFVNFTEIMSKNMPISRKETEFALAALMEIPAQYKATVDFNILGSRNGKF 574
            NIPARAFDNFQFVNFTEIMSKN+  SR +TEFALAALMEIP+QYKAT+D N LG R G  
Sbjct: 282  NIPARAFDNFQFVNFTEIMSKNVDSSRTQTEFALAALMEIPSQYKATIDLNTLGVRRGNA 341

Query: 573  VERVPLPPPLYGA-AXXXXXXXXXXXXFQHSVPPYNAQATSRGTAPPESSTFDNKVCPIC 397
              RV LPPP YG  +            FQ S   Y     +  T P  +S +DNKVCPIC
Sbjct: 342  PTRVALPPPQYGTPSFSSSSKPYHSNSFQKSAESYPEYEAAVSTGPSSNSLYDNKVCPIC 401

Query: 396  LTNSKDMAFGCGHQTCCECGEDLQLCPICRTPIETRIKLY 277
            L+N KDMAFGCGHQTCCECG DL  CPICR+PI+TRIKLY
Sbjct: 402  LSNPKDMAFGCGHQTCCECGVDLNSCPICRSPIQTRIKLY 441


Top