BLASTX nr result
ID: Coptis25_contig00019680
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00019680 (1013 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280247.1| PREDICTED: eukaryotic translation initiation... 239 1e-60 ref|XP_004156166.1| PREDICTED: eukaryotic translation initiation... 224 2e-56 ref|XP_004141468.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t... 224 2e-56 ref|XP_002323907.1| predicted protein [Populus trichocarpa] gi|2... 218 2e-54 ref|NP_001241950.1| uncharacterized protein LOC100786194 [Glycin... 217 4e-54 >ref|XP_002280247.1| PREDICTED: eukaryotic translation initiation factor 3 subunit M [Vitis vinifera] gi|296082198|emb|CBI21203.3| unnamed protein product [Vitis vinifera] Length = 410 Score = 239 bits (609), Expect = 1e-60 Identities = 115/140 (82%), Positives = 130/140 (92%) Frame = +3 Query: 594 VAEPQVARLCMEAQEFIVMGKWLELTSLLLTSADLVFSKVSDKDLECIFTIICNLVTKSE 773 VAEPQV RLCMEAQE +V G+WL+L SL+LTSADL+FSK SDKDLECIFT+ICNLVTKSE Sbjct: 32 VAEPQVTRLCMEAQECMVRGRWLDLASLMLTSADLMFSKASDKDLECIFTVICNLVTKSE 91 Query: 774 SLDEAVEMAKLISAKVTQQPNDKPALRLKILFNLYNLLVNPYSKFYVYMKALSLAVNGKV 953 S DEA+EMAK ISAK+TQQPNDK ALRLKILFNLYNLL NPYS+FYVYMKAL+LAVNGKV Sbjct: 92 SPDEALEMAKFISAKITQQPNDKAALRLKILFNLYNLLENPYSRFYVYMKALNLAVNGKV 151 Query: 954 SEHIVPSFKKIDSFLREWNV 1013 +EHI+PSFK +DSFL+EWN+ Sbjct: 152 TEHIIPSFKMMDSFLKEWNI 171 >ref|XP_004156166.1| PREDICTED: eukaryotic translation initiation factor 3 subunit M-like [Cucumis sativus] Length = 410 Score = 224 bits (572), Expect = 2e-56 Identities = 107/139 (76%), Positives = 126/139 (90%) Frame = +3 Query: 597 AEPQVARLCMEAQEFIVMGKWLELTSLLLTSADLVFSKVSDKDLECIFTIICNLVTKSES 776 AEPQV RLC+EAQE +V+G+WL+L SL+LTSADL+FSKVS+KDLEC+FTIICNLVTK+ S Sbjct: 33 AEPQVNRLCVEAQECMVIGRWLDLASLMLTSADLIFSKVSEKDLECVFTIICNLVTKAGS 92 Query: 777 LDEAVEMAKLISAKVTQQPNDKPALRLKILFNLYNLLVNPYSKFYVYMKALSLAVNGKVS 956 DE++EMAKLISAK+ QQPNDKPALRLKILFNLYNLL NPYS+F+VYMKAL LA GK Sbjct: 93 PDESLEMAKLISAKICQQPNDKPALRLKILFNLYNLLENPYSRFHVYMKALDLAFKGKAP 152 Query: 957 EHIVPSFKKIDSFLREWNV 1013 EHI+P+ KKI+SFLREWN+ Sbjct: 153 EHIIPTLKKIESFLREWNI 171 >ref|XP_004141468.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit M-like [Cucumis sativus] Length = 417 Score = 224 bits (572), Expect = 2e-56 Identities = 107/139 (76%), Positives = 126/139 (90%) Frame = +3 Query: 597 AEPQVARLCMEAQEFIVMGKWLELTSLLLTSADLVFSKVSDKDLECIFTIICNLVTKSES 776 AEPQV RLC+EAQE +V+G+WL+L SL+LTSADL+FSKVS+KDLEC+FTIICNLVTK+ S Sbjct: 33 AEPQVNRLCVEAQECMVIGRWLDLASLMLTSADLIFSKVSEKDLECVFTIICNLVTKAGS 92 Query: 777 LDEAVEMAKLISAKVTQQPNDKPALRLKILFNLYNLLVNPYSKFYVYMKALSLAVNGKVS 956 DE++EMAKLISAK+ QQPNDKPALRLKILFNLYNLL NPYS+F+VYMKAL LA GK Sbjct: 93 PDESLEMAKLISAKICQQPNDKPALRLKILFNLYNLLENPYSRFHVYMKALDLAFKGKAP 152 Query: 957 EHIVPSFKKIDSFLREWNV 1013 EHI+P+ KKI+SFLREWN+ Sbjct: 153 EHIIPTLKKIESFLREWNI 171 >ref|XP_002323907.1| predicted protein [Populus trichocarpa] gi|222866909|gb|EEF04040.1| predicted protein [Populus trichocarpa] Length = 439 Score = 218 bits (555), Expect = 2e-54 Identities = 107/142 (75%), Positives = 128/142 (90%), Gaps = 2/142 (1%) Frame = +3 Query: 594 VAEPQVARLCMEAQEFIVMGKWLELTSLLLTSADLVFS--KVSDKDLECIFTIICNLVTK 767 V E QV+RLC+EAQE +VM +WL+LTSL+LTSAD+VFS KVS+KDLECIFT+ICNLVTK Sbjct: 32 VMEQQVSRLCVEAQECMVMNRWLDLTSLMLTSADIVFSNSKVSEKDLECIFTVICNLVTK 91 Query: 768 SESLDEAVEMAKLISAKVTQQPNDKPALRLKILFNLYNLLVNPYSKFYVYMKALSLAVNG 947 S S DE +EMAKLI AK+ QQP+DKPALRLKILFNLYNLL N Y +FYV+MKAL+LAV+G Sbjct: 92 SRSPDEELEMAKLICAKIIQQPSDKPALRLKILFNLYNLLDNAYCRFYVFMKALTLAVSG 151 Query: 948 KVSEHIVPSFKKIDSFLREWNV 1013 KV+EH++PSFKKIDSFL+EWN+ Sbjct: 152 KVTEHVIPSFKKIDSFLKEWNL 173 >ref|NP_001241950.1| uncharacterized protein LOC100786194 [Glycine max] gi|255644746|gb|ACU22875.1| unknown [Glycine max] Length = 410 Score = 217 bits (552), Expect = 4e-54 Identities = 103/140 (73%), Positives = 126/140 (90%) Frame = +3 Query: 594 VAEPQVARLCMEAQEFIVMGKWLELTSLLLTSADLVFSKVSDKDLECIFTIICNLVTKSE 773 VAEPQV+ LCMEA+EFIVMGKWLEL SL++TSA+LVFSKVS+ D+E IFTIICNLVTK+E Sbjct: 32 VAEPQVSGLCMEAEEFIVMGKWLELASLMITSAELVFSKVSETDIESIFTIICNLVTKTE 91 Query: 774 SLDEAVEMAKLISAKVTQQPNDKPALRLKILFNLYNLLVNPYSKFYVYMKALSLAVNGKV 953 + DE +E+ K+I+AK+ QQPN+KPA+RLK L NLYNLL PY +FYVYMKAL+LAVNGKV Sbjct: 92 NPDEVMEIVKVITAKIIQQPNEKPAVRLKTLINLYNLLETPYCQFYVYMKALNLAVNGKV 151 Query: 954 SEHIVPSFKKIDSFLREWNV 1013 +E+I+PSFKKIDSFL+EW + Sbjct: 152 TEYIIPSFKKIDSFLKEWKI 171