BLASTX nr result

ID: Coptis25_contig00019672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019672
         (1402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271057.2| PREDICTED: uncharacterized protein yqxC-like...   442   e-121
ref|XP_002527285.1| Hemolysin A, putative [Ricinus communis] gi|...   437   e-120
ref|XP_003529002.1| PREDICTED: uncharacterized protein yqxC-like...   414   e-113
ref|XP_004149317.1| PREDICTED: putative rRNA methyltransferase Y...   414   e-113
ref|XP_002321231.1| predicted protein [Populus trichocarpa] gi|2...   402   e-110

>ref|XP_002271057.2| PREDICTED: uncharacterized protein yqxC-like [Vitis vinifera]
            gi|302144209|emb|CBI23336.3| unnamed protein product
            [Vitis vinifera]
          Length = 300

 Score =  442 bits (1137), Expect = e-121
 Identities = 233/308 (75%), Positives = 257/308 (83%)
 Frame = -1

Query: 1342 MALLLLKLPFSRTCPSLVLLSKSKALITPTTTAGETWSSNIHIHSQFRIYATSKYGNIQQ 1163
            MAL + KLP    C S  L   SK+    T+    +W    H+ S FR +AT+K G IQ 
Sbjct: 1    MALQIPKLPTISRCCSSTLFFFSKS----TSPVNASWVRT-HLRSSFRSFATTKPGKIQP 55

Query: 1162 PQXXXXXXRLDEICLERFQQYSRTYIQSWILQGKVLVDGKVVNKAGTPISDKAVVEIKAE 983
             +       LDE+CLERFQQYSRT+IQSWILQGKV VDGKVVNKAGTP+SDKAVVEI AE
Sbjct: 56   LKKKRR---LDEVCLERFQQYSRTFIQSWILQGKVFVDGKVVNKAGTPVSDKAVVEIMAE 112

Query: 982  VPKYVCRAGYKLEAALEQLNIDVSGKLAMDAGLSTGGFTDCLLQHGASFVYGVDVGYGQV 803
            VPKYVCRAGYKLEAA+EQL ++VSGK+A+D+GLSTGGFTDCLLQ+GASF+YGVDVGYGQV
Sbjct: 113  VPKYVCRAGYKLEAAIEQLGVEVSGKVALDSGLSTGGFTDCLLQYGASFIYGVDVGYGQV 172

Query: 802  ADKIRQDERVSVIERTNLRYLSGLPQKVDLVTLDLSFISILLVMPAVVNVMKSEAILVTL 623
            ADKIR+DERVSV+ERTNLRYL GLPQKVDLVTLDLSFISILLVMPAVVNVMK E+ LVTL
Sbjct: 173  ADKIRRDERVSVVERTNLRYLPGLPQKVDLVTLDLSFISILLVMPAVVNVMKEESTLVTL 232

Query: 622  VKPQFEARRAQVGGGGIVRDPLVHQEVLERIIKGVENFGFCTIGWIESPLKGAEGNTEFL 443
            VKPQFEARR+QVGGGGIVRDPLVHQEVLERIIKGVE+FGF   GWIESPLKGAEGNTEFL
Sbjct: 233  VKPQFEARRSQVGGGGIVRDPLVHQEVLERIIKGVESFGFECKGWIESPLKGAEGNTEFL 292

Query: 442  VYFERTME 419
            V F R  E
Sbjct: 293  VCFTRKPE 300


>ref|XP_002527285.1| Hemolysin A, putative [Ricinus communis] gi|223533378|gb|EEF35129.1|
            Hemolysin A, putative [Ricinus communis]
          Length = 312

 Score =  437 bits (1124), Expect = e-120
 Identities = 234/315 (74%), Positives = 258/315 (81%), Gaps = 7/315 (2%)
 Frame = -1

Query: 1342 MALLLLKLPF-SRTC------PSLVLLSKSKALITPTTTAGETWSSNIHIHSQFRIYATS 1184
            MA+  LKLP  SR C       S   +S SK   T  T     W     +   FR +A +
Sbjct: 1    MAMRFLKLPLISRYCNNYNSSSSSSFVSLSKFYPTRLTVK---WVKP-EMQFSFRSFAVA 56

Query: 1183 KYGNIQQPQXXXXXXRLDEICLERFQQYSRTYIQSWILQGKVLVDGKVVNKAGTPISDKA 1004
            K G IQ P+       LDEICLERFQQYSRT+IQSWILQGKV VDGK+VNKAGTP+SDKA
Sbjct: 57   KTGKIQIPKKKRR---LDEICLERFQQYSRTFIQSWILQGKVFVDGKMVNKAGTPVSDKA 113

Query: 1003 VVEIKAEVPKYVCRAGYKLEAALEQLNIDVSGKLAMDAGLSTGGFTDCLLQHGASFVYGV 824
            VVEI AEVPKYVCRAG+KLEAA+EQL +DV+GK+A+D+GLSTGGFTDCLLQ+GASFVYGV
Sbjct: 114  VVEIMAEVPKYVCRAGHKLEAAIEQLGVDVAGKVALDSGLSTGGFTDCLLQYGASFVYGV 173

Query: 823  DVGYGQVADKIRQDERVSVIERTNLRYLSGLPQKVDLVTLDLSFISILLVMPAVVNVMKS 644
            DVGYGQVADKIR+DERVSV+ERTNLRYLSGLPQKVDLVTLDLSFISILLVMPAVVNVMK 
Sbjct: 174  DVGYGQVADKIRRDERVSVVERTNLRYLSGLPQKVDLVTLDLSFISILLVMPAVVNVMKE 233

Query: 643  EAILVTLVKPQFEARRAQVGGGGIVRDPLVHQEVLERIIKGVENFGFCTIGWIESPLKGA 464
            +A L+TLVKPQFEARR+QVG GGIVRDP VH+EVLE+IIKGVENFGFC  GWIESPLKGA
Sbjct: 234  DAALITLVKPQFEARRSQVGSGGIVRDPEVHKEVLEKIIKGVENFGFCKNGWIESPLKGA 293

Query: 463  EGNTEFLVYFERTME 419
            EGNTEFLVYF RT E
Sbjct: 294  EGNTEFLVYFSRTPE 308


>ref|XP_003529002.1| PREDICTED: uncharacterized protein yqxC-like [Glycine max]
          Length = 315

 Score =  414 bits (1065), Expect = e-113
 Identities = 219/312 (70%), Positives = 247/312 (79%), Gaps = 2/312 (0%)
 Frame = -1

Query: 1342 MALLLLKLP--FSRTCPSLVLLSKSKALITPTTTAGETWSSNIHIHSQFRIYATSKYGNI 1169
            MAL  LK P   SR   +   L+    L  P          N  I + FR YAT+K   +
Sbjct: 1    MALQFLKHPVTISRGLHNETTLTFISRLRNPKLLFSVRCEDNAQIATSFRSYATAKSEKV 60

Query: 1168 QQPQXXXXXXRLDEICLERFQQYSRTYIQSWILQGKVLVDGKVVNKAGTPISDKAVVEIK 989
             Q +       LDEIC+E++QQYSR+ IQSWILQGKV VDGKV+NKAGTP+  KAVVEIK
Sbjct: 61   LQVRKKKR---LDEICVEKYQQYSRSVIQSWILQGKVYVDGKVINKAGTPVPGKAVVEIK 117

Query: 988  AEVPKYVCRAGYKLEAALEQLNIDVSGKLAMDAGLSTGGFTDCLLQHGASFVYGVDVGYG 809
            A+VPKYVCRAG+KLEAA+E L +DV+GK+A+D+GLSTGGFTDCLLQ+GAS VYGVDVGYG
Sbjct: 118  ADVPKYVCRAGHKLEAAVELLGVDVAGKVALDSGLSTGGFTDCLLQYGASHVYGVDVGYG 177

Query: 808  QVADKIRQDERVSVIERTNLRYLSGLPQKVDLVTLDLSFISILLVMPAVVNVMKSEAILV 629
            QVADKIR+DERVSVIERTNLRYL+ LPQ VDLVTLDLSFISILLVMPAVVN MK  A LV
Sbjct: 178  QVADKIRRDERVSVIERTNLRYLAELPQNVDLVTLDLSFISILLVMPAVVNAMKENAALV 237

Query: 628  TLVKPQFEARRAQVGGGGIVRDPLVHQEVLERIIKGVENFGFCTIGWIESPLKGAEGNTE 449
            TLVKPQFEARR+QVG GGIV+DP VHQEVLE+IIKGVENFGFC  GWIESPLKGAEGNTE
Sbjct: 238  TLVKPQFEARRSQVGKGGIVKDPAVHQEVLEKIIKGVENFGFCCKGWIESPLKGAEGNTE 297

Query: 448  FLVYFERTMEVE 413
            FLV+F RT  +E
Sbjct: 298  FLVHFNRTHNIE 309


>ref|XP_004149317.1| PREDICTED: putative rRNA methyltransferase YqxC-like [Cucumis
            sativus] gi|449518775|ref|XP_004166411.1| PREDICTED:
            putative rRNA methyltransferase YqxC-like [Cucumis
            sativus]
          Length = 296

 Score =  414 bits (1063), Expect = e-113
 Identities = 210/269 (78%), Positives = 238/269 (88%)
 Frame = -1

Query: 1231 SSNIHIHSQFRIYATSKYGNIQQPQXXXXXXRLDEICLERFQQYSRTYIQSWILQGKVLV 1052
            SS IH  S  + ++ +K G IQ         RLDE+C+ER+QQ+SRT IQSWILQGKVLV
Sbjct: 22   SSPIHSPSP-KAFSVAKSGKIQS-LTLKKKRRLDEVCVERYQQFSRTMIQSWILQGKVLV 79

Query: 1051 DGKVVNKAGTPISDKAVVEIKAEVPKYVCRAGYKLEAALEQLNIDVSGKLAMDAGLSTGG 872
            DGKV++KAGTP++DKA VEI AEVPKYVCRAG KLEAA+EQL++DV GK+A+DAGLSTGG
Sbjct: 80   DGKVISKAGTPVADKAKVEIIAEVPKYVCRAGLKLEAAIEQLDVDVDGKVALDAGLSTGG 139

Query: 871  FTDCLLQHGASFVYGVDVGYGQVADKIRQDERVSVIERTNLRYLSGLPQKVDLVTLDLSF 692
            FTDCLLQHGASFVYGVDVGYGQVADKIR+DERV V+ERTNLRYL+GLPQKVD+VTLDLSF
Sbjct: 140  FTDCLLQHGASFVYGVDVGYGQVADKIRRDERVCVMERTNLRYLAGLPQKVDIVTLDLSF 199

Query: 691  ISILLVMPAVVNVMKSEAILVTLVKPQFEARRAQVGGGGIVRDPLVHQEVLERIIKGVEN 512
            ISILLVMPAV+NVMK  + +VTLVKPQFE RR+QVGGGGIVRDP VHQEVLE+IIKGVEN
Sbjct: 200  ISILLVMPAVINVMKETSTIVTLVKPQFECRRSQVGGGGIVRDPQVHQEVLEKIIKGVEN 259

Query: 511  FGFCTIGWIESPLKGAEGNTEFLVYFERT 425
            FGFC+ GWIESPLKGAEGNTEFLV F+RT
Sbjct: 260  FGFCSKGWIESPLKGAEGNTEFLVCFDRT 288


>ref|XP_002321231.1| predicted protein [Populus trichocarpa] gi|222862004|gb|EEE99546.1|
            predicted protein [Populus trichocarpa]
          Length = 255

 Score =  402 bits (1034), Expect = e-110
 Identities = 203/243 (83%), Positives = 222/243 (91%)
 Frame = -1

Query: 1135 LDEICLERFQQYSRTYIQSWILQGKVLVDGKVVNKAGTPISDKAVVEIKAEVPKYVCRAG 956
            LDEICLERFQQYSRT+IQSWILQGKV VDGKV NKAGTP+S+K+VVEI A VPKYVCRAG
Sbjct: 13   LDEICLERFQQYSRTFIQSWILQGKVFVDGKVANKAGTPVSEKSVVEIIAVVPKYVCRAG 72

Query: 955  YKLEAALEQLNIDVSGKLAMDAGLSTGGFTDCLLQHGASFVYGVDVGYGQVADKIRQDER 776
            YKLEAA+E+L++DV+GK+A+D+GLSTGGFTDCLLQ+GASFVYGVDVGYGQVADKIR+DER
Sbjct: 73   YKLEAAIEKLDVDVAGKVALDSGLSTGGFTDCLLQYGASFVYGVDVGYGQVADKIRRDER 132

Query: 775  VSVIERTNLRYLSGLPQKVDLVTLDLSFISILLVMPAVVNVMKSEAILVTLVKPQFEARR 596
            V VIERTNLRYLS LPQKVDLVTLDLSFISILLVMPAVVNVMK EA LVTLVKPQFEARR
Sbjct: 133  VCVIERTNLRYLSELPQKVDLVTLDLSFISILLVMPAVVNVMKEEATLVTLVKPQFEARR 192

Query: 595  AQVGGGGIVRDPLVHQEVLERIIKGVENFGFCTIGWIESPLKGAEGNTEFLVYFERTMEV 416
            +QVG GGIVRD  VHQEVLE+I KGVE FGF + GWIESPLKGAEGN EFLV+F R  E 
Sbjct: 193  SQVGSGGIVRDSQVHQEVLEKITKGVEGFGFRSNGWIESPLKGAEGNIEFLVHFSRIHEN 252

Query: 415  ESE 407
             +E
Sbjct: 253  SAE 255


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