BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019668
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536302.1| PREDICTED: uncharacterized protein LOC100790...    74   3e-11
gb|AFK36549.1| unknown [Lotus japonicus]                               73   6e-11
ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263...    72   8e-11
ref|XP_003520224.1| PREDICTED: uncharacterized protein LOC100795...    69   7e-10
ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putati...    67   3e-09

>ref|XP_003536302.1| PREDICTED: uncharacterized protein LOC100790892 [Glycine max]
          Length = 206

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 30/57 (52%), Positives = 44/57 (77%)
 Frame = -1

Query: 619 QVNGLPRPPTMNPPLTMPGGTSTAVTNGLPSLVTQAVYQGNPTASGSGAFDSYNNNA 449
           Q+N +PRPP++ PP T+PG T+T  +NG PS+V+ A+YQ NP A  SG++D+YN +A
Sbjct: 143 QLNTIPRPPSLAPPPTVPGSTATPASNGAPSMVSSAMYQANPPAPSSGSYDNYNTSA 199


>gb|AFK36549.1| unknown [Lotus japonicus]
          Length = 192

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 30/57 (52%), Positives = 41/57 (71%)
 Frame = -1

Query: 619 QVNGLPRPPTMNPPLTMPGGTSTAVTNGLPSLVTQAVYQGNPTASGSGAFDSYNNNA 449
           Q+N +PRPP+  PP T PG T+   +NG PS+V+ A+YQ NP+A  SG +D+YN NA
Sbjct: 129 QLNAIPRPPSFAPPTTAPGSTAAPASNGAPSMVSSAMYQPNPSAPSSGGYDNYNANA 185


>ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263028 [Vitis vinifera]
           gi|363805533|sp|F6HQ26.1|RU1C_VITVI RecName: Full=U1
           small nuclear ribonucleoprotein C; Short=U1 snRNP C;
           Short=U1-C; Short=U1C
          Length = 213

 Score = 72.4 bits (176), Expect = 8e-11
 Identities = 32/56 (57%), Positives = 39/56 (69%)
 Frame = -1

Query: 616 VNGLPRPPTMNPPLTMPGGTSTAVTNGLPSLVTQAVYQGNPTASGSGAFDSYNNNA 449
           +N LPRPPTMN P  +PG TST  + G PS++TQ +YQ NP    SG FDS+N NA
Sbjct: 151 LNSLPRPPTMNVPPAVPGSTSTPTSGGAPSMMTQPMYQANPAGPTSGGFDSFNINA 206


>ref|XP_003520224.1| PREDICTED: uncharacterized protein LOC100795821 [Glycine max]
          Length = 206

 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 28/57 (49%), Positives = 42/57 (73%)
 Frame = -1

Query: 619 QVNGLPRPPTMNPPLTMPGGTSTAVTNGLPSLVTQAVYQGNPTASGSGAFDSYNNNA 449
           Q+N +PRPP++ PP  +PG T+   +NG PS+V+ A+YQ NP A  SG++D+YN +A
Sbjct: 143 QLNTIPRPPSLAPPPAVPGSTAAPASNGAPSMVSSAMYQANPPAPSSGSYDNYNASA 199


>ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putative [Ricinus communis]
           gi|223540083|gb|EEF41660.1| U1 small nuclear
           ribonucleoprotein C, putative [Ricinus communis]
          Length = 206

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 33/62 (53%), Positives = 39/62 (62%)
 Frame = -1

Query: 619 QVNGLPRPPTMNPPLTMPGGTSTAVTNGLPSLVTQAVYQGNPTASGSGAFDSYNNNATPG 440
           QVNGLPRPP   PP T+PG  + A  +G PS+V  A YQ NP    S  FDS+NN  TP 
Sbjct: 144 QVNGLPRPPMSIPPATVPGSAAVAPPSGAPSMVPPASYQTNPAPPTSAGFDSFNN--TPN 201

Query: 439 LQ 434
           L+
Sbjct: 202 LE 203