BLASTX nr result
ID: Coptis25_contig00019665
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00019665 (405 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003625837.1| F-box/kelch-repeat protein [Medicago truncat... 62 5e-08 ref|XP_002276543.1| PREDICTED: F-box/kelch-repeat protein At1g57... 62 6e-08 ref|XP_002309425.1| predicted protein [Populus trichocarpa] gi|2... 59 4e-07 gb|AFK44646.1| unknown [Medicago truncatula] 57 2e-06 gb|ACJ85554.1| unknown [Medicago truncatula] 57 2e-06 >ref|XP_003625837.1| F-box/kelch-repeat protein [Medicago truncatula] gi|355500852|gb|AES82055.1| F-box/kelch-repeat protein [Medicago truncatula] Length = 820 Score = 62.0 bits (149), Expect = 5e-08 Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 3/125 (2%) Frame = -1 Query: 372 KFQVKNEEKKIKDEVNK*KQTWEDLPIELLEVIVGSLFLGDCIRFHLTCKAWMSIIPPLR 193 K +K+ + N QTW DLP E+LE+ + L +GD IR CK W S+ +R Sbjct: 454 KSSIKDNRRAAVKSDNLELQTWADLPAEVLELFLSRLDIGDNIRASAVCKRWCSVATSVR 513 Query: 192 SNIPFFLQSKSDSQQLPQLIFFPKTKNAVCQFNHPIYSDSYIMNFPELASNCSAC---QA 22 Q P L++FPK N F P+ +Y + PEL C C Sbjct: 514 V-----------LDQSPWLMYFPKKGNCY-DFYDPVQRKTYSLELPEL-DGCRVCYTKDG 560 Query: 21 WVVVN 7 W+++N Sbjct: 561 WLLLN 565 >ref|XP_002276543.1| PREDICTED: F-box/kelch-repeat protein At1g57790-like [Vitis vinifera] Length = 376 Score = 61.6 bits (148), Expect = 6e-08 Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 2/123 (1%) Frame = -1 Query: 372 KFQVKNEEKKIKDEVNK*KQTWEDLPIELLEVIVGSLFLGDCIRFHLTCKAWMSIIPPLR 193 K + N EK + E+ Q+W DLP ELLE+I+ L L + IR CK W S+ R Sbjct: 19 KQAITNAEKAVTLEL----QSWSDLPAELLELIMSCLTLEENIRASAVCKRWYSVAIATR 74 Query: 192 SNIPFFLQSKSDSQQLPQLIFFPKTKNAVCQFNHPIYSDSYIMNFPELASN--CSACQAW 19 Q P ++FFPK + +F P+ ++Y ++ PEL + CS W Sbjct: 75 V-----------VNQTPWIMFFPKVGDTY-EFYDPLQRETYCIDLPELCGSRVCSTIDGW 122 Query: 18 VVV 10 +++ Sbjct: 123 LLL 125 >ref|XP_002309425.1| predicted protein [Populus trichocarpa] gi|222855401|gb|EEE92948.1| predicted protein [Populus trichocarpa] Length = 376 Score = 58.9 bits (141), Expect = 4e-07 Identities = 45/128 (35%), Positives = 62/128 (48%), Gaps = 2/128 (1%) Frame = -1 Query: 387 VVPNCKFQVKNEEKKIKDEVNK*KQTWEDLPIELLEVIVGSLFLGDCIRFHLTCKAWMSI 208 VV + K KN KK+K E QTW DLPIELLE+I+ L L D IR + CK W + Sbjct: 16 VVDDKKTTTKN--KKVKLEA----QTWSDLPIELLELILCRLSLEDNIRSSVACKRWNTA 69 Query: 207 IPPLRSNIPFFLQSKSDSQQLPQLIFFPKTKNAVCQFNHPIYSDSYIMNFPELASN--CS 34 +R Q P L++FPK N + +F P +Y + PEL + C Sbjct: 70 AISVRV-----------VNQSPWLMYFPKFGN-MYEFYDPAQRKTYSLELPELYGSRVCY 117 Query: 33 ACQAWVVV 10 W+++ Sbjct: 118 TRDGWLLL 125 >gb|AFK44646.1| unknown [Medicago truncatula] Length = 376 Score = 57.0 bits (136), Expect = 2e-06 Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 2/119 (1%) Frame = -1 Query: 360 KNEEKKIKDEVNK*KQTWEDLPIELLEVIVGSLFLGDCIRFHLTCKAWMSIIPPLRSNIP 181 + E ++K++ N QTW DLP ELLE+I+ L L D +R CK+W + +R Sbjct: 20 RREATEVKND-NLELQTWADLPAELLEMIISRLALEDNVRASAVCKSWNFVANAVRM--- 75 Query: 180 FFLQSKSDSQQLPQLIFFPKTKNAVCQFNHPIYSDSYIMNFPELASN--CSACQAWVVV 10 Q P L++FPK +F P+ +Y + FPEL + C W+++ Sbjct: 76 --------VNQSPWLMYFPKF-GQWYEFYDPVQRKTYSIEFPELNGSRVCYTKDGWLLL 125 >gb|ACJ85554.1| unknown [Medicago truncatula] Length = 220 Score = 57.0 bits (136), Expect = 2e-06 Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 2/119 (1%) Frame = -1 Query: 360 KNEEKKIKDEVNK*KQTWEDLPIELLEVIVGSLFLGDCIRFHLTCKAWMSIIPPLRSNIP 181 + E ++K++ N QTW DLP ELLE+I+ L L D +R CK+W + +R Sbjct: 20 RREATEVKND-NLELQTWADLPAELLEMIISRLALEDNVRASAVCKSWNFVANAVRM--- 75 Query: 180 FFLQSKSDSQQLPQLIFFPKTKNAVCQFNHPIYSDSYIMNFPELASN--CSACQAWVVV 10 Q P L++FPK +F P+ +Y + FPEL + C W+++ Sbjct: 76 --------VNQSPWLMYFPKF-GQWYEFYDPVQRKTYSIEFPELNGSRVCYTKDGWLLL 125