BLASTX nr result

ID: Coptis25_contig00019658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019658
         (1479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273089.2| PREDICTED: protein FAR1-RELATED SEQUENCE 12-...    86   2e-14
emb|CAN63725.1| hypothetical protein VITISV_039588 [Vitis vinifera]    85   4e-14
emb|CBI21244.3| unnamed protein product [Vitis vinifera]               85   6e-14
emb|CAN71074.1| hypothetical protein VITISV_020460 [Vitis vinifera]    85   6e-14
ref|XP_002526937.1| hypothetical protein RCOM_0530880 [Ricinus c...    82   5e-13

>ref|XP_002273089.2| PREDICTED: protein FAR1-RELATED SEQUENCE 12-like [Vitis vinifera]
          Length = 681

 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 57/157 (36%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
 Frame = +3

Query: 3   LESKSNRSSQLELYSGMDWETKAGPPDIDSVTHALPKVGMVFQSEEHAYDFYNQYAKTVG 182
           +E +   SS L++    D E +    +++S    LPK+GM F+SE+HAY FYN YA  VG
Sbjct: 1   MEDQIQTSSLLDI----DAEQQCHSSEVES-PDGLPKIGMKFESEDHAYRFYNAYAGLVG 55

Query: 183 FXXXXXXXXXXXXXGTVIRRVLCCSKQGFH---------TKIGLSARTGCEARIIIKRRG 335
           F             G+V+ R   C K+GF           K     RTGC A++ I R+ 
Sbjct: 56  FSVRKDFKNRSKIDGSVMSRRFVCFKRGFRLPDKRNLNVKKPHKEVRTGCLAQMTISRQS 115

Query: 336 -GNFLLTVVNETHNHELVAPSEVHRLRSQRKFEDSQA 443
            G + +      HNHE+V P  VH L S RK   SQA
Sbjct: 116 DGRYRVIHFEANHNHEVVGPEYVHALPSHRKLTVSQA 152


>emb|CAN63725.1| hypothetical protein VITISV_039588 [Vitis vinifera]
          Length = 720

 Score = 85.1 bits (209), Expect = 4e-14
 Identities = 56/156 (35%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
 Frame = +3

Query: 6   ESKSNRSSQLELYSGMDWETKAGPPDIDSVTHALPKVGMVFQSEEHAYDFYNQYAKTVGF 185
           E K     Q      +D E +    + +S    LPK+GM F+SE+HAY FYN YA  VGF
Sbjct: 37  EGKMEDQIQTSSLLDIDAEQQCHXSEXES-PDGLPKIGMKFESEDHAYXFYNAYAGLVGF 95

Query: 186 XXXXXXXXXXXXXGTVIRRVLCCSKQGFH---------TKIGLSARTGCEARIIIKRRG- 335
                        G+V+ R   C K+GF           K     RTGC A++ I R+  
Sbjct: 96  SVRKDFKNRSKIDGSVMSRRFVCFKRGFRXPDKRNLNVKKPHKEVRTGCLAQMTISRQSD 155

Query: 336 GNFLLTVVNETHNHELVAPSEVHRLRSQRKFEDSQA 443
           G + +      HNHE+V P  VH L S RK   SQA
Sbjct: 156 GRYRVIHFEANHNHEVVGPEYVHALPSHRKLTVSQA 191


>emb|CBI21244.3| unnamed protein product [Vitis vinifera]
          Length = 408

 Score = 84.7 bits (208), Expect = 6e-14
 Identities = 55/131 (41%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
 Frame = +3

Query: 81  DIDSVTHALPKVGMVFQSEEHAYDFYNQYAKTVGFXXXXXXXXXXXXXGTVIRRVLCCSK 260
           DID V    PKVGM F+SE+ AY FYN+YAK VGF             GTV+ R   C K
Sbjct: 76  DIDEV----PKVGMEFESEDDAYVFYNRYAKVVGFSVRKDFLNKSKVNGTVVSRRFTCFK 131

Query: 261 QGFHTK----IGL-----SARTGCEARIIIKRR-GGNFLLTVVNETHNHELVAPSEVHRL 410
           +G+  K    I +       RTGC A++ I R+  G + +      HNHE V P  VH L
Sbjct: 132 EGYRRKDKRDINVKKPRKQTRTGCLAQMTISRQPNGKYRVIHFEAKHNHEGVGPHLVHML 191

Query: 411 RSQRKFEDSQA 443
            SQR+   SQA
Sbjct: 192 PSQRRLAFSQA 202


>emb|CAN71074.1| hypothetical protein VITISV_020460 [Vitis vinifera]
          Length = 481

 Score = 84.7 bits (208), Expect = 6e-14
 Identities = 55/131 (41%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
 Frame = +3

Query: 81  DIDSVTHALPKVGMVFQSEEHAYDFYNQYAKTVGFXXXXXXXXXXXXXGTVIRRVLCCSK 260
           DID V    PKVGM F+SE+ AY FYN+YAK VGF             GTV+ R   C K
Sbjct: 54  DIDEV----PKVGMEFESEDDAYVFYNRYAKVVGFSVRKDFLNKSKVNGTVVSRRFTCFK 109

Query: 261 QGFHTK----IGL-----SARTGCEARIIIKRR-GGNFLLTVVNETHNHELVAPSEVHRL 410
           +G+  K    I +       RTGC A++ I R+  G + +      HNHE V P  VH L
Sbjct: 110 EGYRRKDKRDINVKKPRKQTRTGCLAQMTISRQPNGKYRVIHFEAKHNHEGVGPHLVHML 169

Query: 411 RSQRKFEDSQA 443
            SQR+   SQA
Sbjct: 170 PSQRRLAFSQA 180


>ref|XP_002526937.1| hypothetical protein RCOM_0530880 [Ricinus communis]
           gi|223533689|gb|EEF35424.1| hypothetical protein
           RCOM_0530880 [Ricinus communis]
          Length = 367

 Score = 81.6 bits (200), Expect = 5e-13
 Identities = 47/128 (36%), Positives = 65/128 (50%), Gaps = 10/128 (7%)
 Frame = +3

Query: 87  DSVTHALPKVGMVFQSEEHAYDFYNQYAKTVGFXXXXXXXXXXXXXGTVIRRVLCCSKQG 266
           D V   +PK+GM F+SE+HAY+FYN YA  VGF             G V  R   C ++G
Sbjct: 227 DFVMDGVPKLGMGFESEDHAYEFYNAYAGQVGFSVRKDYVNRSKIDGAVASRRFTCFREG 286

Query: 267 FHTK---------IGLSARTGCEARIIIKRR-GGNFLLTVVNETHNHELVAPSEVHRLRS 416
           F  K              R GC A+++I R+    + +T   + HNHELVA  +V  LRS
Sbjct: 287 FRQKDKRDLNVKRPRKETRIGCTAQLVISRQPDSKYRVTHFEKKHNHELVAVCKVRTLRS 346

Query: 417 QRKFEDSQ 440
           Q++   +Q
Sbjct: 347 QKRLATAQ 354



 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 49/137 (35%), Positives = 67/137 (48%), Gaps = 9/137 (6%)
 Frame = +3

Query: 60  ETKAGPPDIDSVTHALPKVGMVFQSEEHAYDFYNQYAKTVGFXXXXXXXXXXXXXGTVIR 239
           E   G  + +  T+  PKVGM F++E+HAY  Y++YA   GF             G V+ 
Sbjct: 83  EADVGLKNEEEETYVAPKVGMEFETEDHAYKCYSRYAVLQGFSIRKDFVNKSRLNGDVVS 142

Query: 240 RVLCCSKQGFH--------TKIGLSARTGCEARIIIKRR-GGNFLLTVVNETHNHELVAP 392
           R   C KQG+          K     RTGC A++ I R+  G F +T     HNHE +AP
Sbjct: 143 RRYTCYKQGYRPANHIAKVRKPRQETRTGCLAQMTIARQPNGKFRVTRFVTQHNHEFLAP 202

Query: 393 SEVHRLRSQRKFEDSQA 443
           S  H L SQ++   +QA
Sbjct: 203 STAHMLPSQKRLTFAQA 219


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