BLASTX nr result

ID: Coptis25_contig00019656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019656
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31452.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_002273502.1| PREDICTED: GATA transcription factor 9-like ...    75   7e-12
ref|XP_002534043.1| GATA transcription factor, putative [Ricinus...    67   2e-09
dbj|BAC98495.1| AG-motif binding protein-5 [Nicotiana tabacum]         64   1e-08
ref|XP_003536350.1| PREDICTED: GATA transcription factor 9-like ...    64   1e-08

>emb|CBI31452.3| unnamed protein product [Vitis vinifera]
          Length = 185

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 45/105 (42%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
 Frame = +1

Query: 10  CGXXXXXXXXXXXXPAEDIQGGGDILVGGDCVVSHNTNGGFHGVWQ--SPPVDACSPLFS 183
           CG            P ED+ GG   L+GGDC         F  +W   S P+     +FS
Sbjct: 12  CGSFFDHIDDLLEFPPEDVSGG---LMGGDC-------NSFPSIWTNASDPLPGPDSVFS 61

Query: 184 NPNNHSA--FPTDLSVPDEDIAQLEWLSTFVEDSFSAGTITLNED 312
            PN++S      +LSVP EDI QLEWLS FVEDSFS G+I LN++
Sbjct: 62  GPNSNSNSDLSAELSVPYEDIVQLEWLSNFVEDSFSGGSIGLNKE 106


>ref|XP_002273502.1| PREDICTED: GATA transcription factor 9-like [Vitis vinifera]
          Length = 340

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 45/105 (42%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
 Frame = +1

Query: 10  CGXXXXXXXXXXXXPAEDIQGGGDILVGGDCVVSHNTNGGFHGVWQ--SPPVDACSPLFS 183
           CG            P ED+ GG   L+GGDC         F  +W   S P+     +FS
Sbjct: 12  CGSFFDHIDDLLEFPPEDVSGG---LMGGDC-------NSFPSIWTNASDPLPGPDSVFS 61

Query: 184 NPNNHSA--FPTDLSVPDEDIAQLEWLSTFVEDSFSAGTITLNED 312
            PN++S      +LSVP EDI QLEWLS FVEDSFS G+I LN++
Sbjct: 62  GPNSNSNSDLSAELSVPYEDIVQLEWLSNFVEDSFSGGSIGLNKE 106


>ref|XP_002534043.1| GATA transcription factor, putative [Ricinus communis]
           gi|223525941|gb|EEF28339.1| GATA transcription factor,
           putative [Ricinus communis]
          Length = 359

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 8/90 (8%)
 Frame = +1

Query: 97  DCVVSHNTNGG---FHGVW--QSPPVDACSPLFS-NPNNHSA--FPTDLSVPDEDIAQLE 252
           DC  + N NG    F  +W  QS  +     +FS N NN+SA     +LSVP EDI QLE
Sbjct: 37  DCTNAVNVNGNVNSFPSIWSTQSDSLPGSHSVFSSNTNNNSASDLSAELSVPYEDIVQLE 96

Query: 253 WLSTFVEDSFSAGTITLNEDFVRTNNNNNN 342
           WLS FVEDSFS G++T+N++   + N +++
Sbjct: 97  WLSNFVEDSFSGGSLTMNKEESTSINKDSS 126


>dbj|BAC98495.1| AG-motif binding protein-5 [Nicotiana tabacum]
          Length = 342

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/63 (55%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
 Frame = +1

Query: 130 FHGVWQSPPVDACSPLFSNPNNHSA--FPTDLSVPDEDIAQLEWLSTFVEDSFSAGTITL 303
           F  +W  P  D+ S LFS  + +SA  F  +LSVP EDI QLEWLSTFVEDSFS G +TL
Sbjct: 41  FPSIWNDPLPDSDS-LFSGSHRNSASDFSAELSVPYEDIVQLEWLSTFVEDSFSGGGLTL 99

Query: 304 NED 312
            ++
Sbjct: 100 GKE 102


>ref|XP_003536350.1| PREDICTED: GATA transcription factor 9-like [Glycine max]
          Length = 347

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 39/102 (38%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
 Frame = +1

Query: 10  CGXXXXXXXXXXXXPAEDIQGGGDILVGGDCVVSHNTNGGFHGVW--QSPPVDACSPLFS 183
           CG            P ED+ GG   L      VS   +     +W  +S    A   +FS
Sbjct: 12  CGSFFDHIDDLLDFPVEDVDGGAATLPS----VSAGNSNSLASIWPSESDSFPASDSVFS 67

Query: 184 NPNNHSAFPTDLSVPDEDIAQLEWLSTFVEDSFSAGTITLNE 309
             N+ S    +LSVP EDI QLEWLS FVEDSF  G++T+N+
Sbjct: 68  G-NSASDLSAELSVPYEDIVQLEWLSNFVEDSFCGGSLTMNK 108


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