BLASTX nr result

ID: Coptis25_contig00019653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019653
         (1663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521835.1| conserved hypothetical protein [Ricinus comm...   182   2e-43
emb|CBI32468.3| unnamed protein product [Vitis vinifera]              181   5e-43
ref|XP_002284957.1| PREDICTED: uncharacterized protein LOC100250...   181   5e-43
gb|ABR16941.1| unknown [Picea sitchensis]                             146   4e-39
ref|XP_002891514.1| EMB1273 [Arabidopsis lyrata subsp. lyrata] g...   165   4e-38

>ref|XP_002521835.1| conserved hypothetical protein [Ricinus communis]
            gi|223538873|gb|EEF40471.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 190

 Score =  182 bits (463), Expect = 2e-43
 Identities = 83/126 (65%), Positives = 100/126 (79%)
 Frame = +2

Query: 758  VYAVAKYLSVPLLALTSLSELSYCTHERKI*LVPIPLLTGIVVAGIFKDAALELYPQLKE 937
            V AV KYL VPLLA++SLSE+SYC H +K+  VP+PLL GIVVAGI K+ ALEL P LK+
Sbjct: 54   VVAVVKYLCVPLLAVSSLSEMSYCAHHKKLSFVPLPLLIGIVVAGILKETALELSPLLKD 113

Query: 938  GEFPWHLVSVAFFLVLLKLPGPYYPYWGRIFIPHFANGGLLRTLWSAIMWYKKPHVAPET 1117
             E PWHL+++A F  L+KLPGPYYPYWGRIFIPHFANG L RT+WSA +WY+KP  A ++
Sbjct: 114  AEVPWHLIAIAIFFSLIKLPGPYYPYWGRIFIPHFANGVLWRTIWSAFLWYRKPRKASQS 173

Query: 1118 TLPQTS 1135
             L Q S
Sbjct: 174  MLKQDS 179


>emb|CBI32468.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  181 bits (459), Expect = 5e-43
 Identities = 85/124 (68%), Positives = 100/124 (80%)
 Frame = +2

Query: 764  AVAKYLSVPLLALTSLSELSYCTHERKI*LVPIPLLTGIVVAGIFKDAALELYPQLKEGE 943
            AV KYL  PLLA++SLSE+SYC +E+K+ LVPIPLL GIVVAG+ KDAALEL P LK+ E
Sbjct: 101  AVIKYLCAPLLAVSSLSEMSYCANEKKLFLVPIPLLIGIVVAGLLKDAALELSPVLKDAE 160

Query: 944  FPWHLVSVAFFLVLLKLPGPYYPYWGRIFIPHFANGGLLRTLWSAIMWYKKPHVAPETTL 1123
              WHL+++A F  LLKLPGPYYPYWGRIFIPHFANGGLLRTLWS  +WY++P    ET L
Sbjct: 161  VAWHLIAIAIFFTLLKLPGPYYPYWGRIFIPHFANGGLLRTLWSVFLWYRRPR---ETLL 217

Query: 1124 PQTS 1135
             + S
Sbjct: 218  QRKS 221


>ref|XP_002284957.1| PREDICTED: uncharacterized protein LOC100250293 [Vitis vinifera]
          Length = 253

 Score =  181 bits (459), Expect = 5e-43
 Identities = 85/124 (68%), Positives = 100/124 (80%)
 Frame = +2

Query: 764  AVAKYLSVPLLALTSLSELSYCTHERKI*LVPIPLLTGIVVAGIFKDAALELYPQLKEGE 943
            AV KYL  PLLA++SLSE+SYC +E+K+ LVPIPLL GIVVAG+ KDAALEL P LK+ E
Sbjct: 122  AVIKYLCAPLLAVSSLSEMSYCANEKKLFLVPIPLLIGIVVAGLLKDAALELSPVLKDAE 181

Query: 944  FPWHLVSVAFFLVLLKLPGPYYPYWGRIFIPHFANGGLLRTLWSAIMWYKKPHVAPETTL 1123
              WHL+++A F  LLKLPGPYYPYWGRIFIPHFANGGLLRTLWS  +WY++P    ET L
Sbjct: 182  VAWHLIAIAIFFTLLKLPGPYYPYWGRIFIPHFANGGLLRTLWSVFLWYRRPR---ETLL 238

Query: 1124 PQTS 1135
             + S
Sbjct: 239  QRKS 242


>gb|ABR16941.1| unknown [Picea sitchensis]
          Length = 247

 Score =  146 bits (368), Expect(2) = 4e-39
 Identities = 65/111 (58%), Positives = 83/111 (74%)
 Frame = +2

Query: 761  YAVAKYLSVPLLALTSLSELSYCTHERKI*LVPIPLLTGIVVAGIFKDAALELYPQLKEG 940
            + VAK+L +P+L ++SLSE+ YC  + K  L+PI +L GI +AGI K+ A+EL   L+EG
Sbjct: 120  FEVAKWLFIPVLFVSSLSEMVYCGWQNKELLIPIGMLAGIYLAGILKETAVELSENLQEG 179

Query: 941  EFPWHLVSVAFFLVLLKLPGPYYPYWGRIFIPHFANGGLLRTLWSAIMWYK 1093
             FPWHL  +  F  L+K PGPYYPYWGRIF+PHFANGGL RTLW A +WYK
Sbjct: 180  GFPWHLAIIGAFFALIKFPGPYYPYWGRIFLPHFANGGLWRTLWFAHIWYK 230



 Score = 43.5 bits (101), Expect(2) = 4e-39
 Identities = 21/65 (32%), Positives = 35/65 (53%)
 Frame = +3

Query: 567 FQNTTPMVTCAINMTEGDSAGPSRIILVHSLGEIKKVWKTLPQPVRSFPWPEALVNFLEL 746
           F+   P V   +NMT G S GP +I  V+ L +++ +W+  P+P++ FPW      F   
Sbjct: 59  FKRVVPHV---MNMTRGQSGGPDKIRHVY-LEKVRNLWERCPEPIKVFPWDRVYNKFFHH 114

Query: 747 ILGLS 761
           +  L+
Sbjct: 115 LFRLA 119


>ref|XP_002891514.1| EMB1273 [Arabidopsis lyrata subsp. lyrata]
            gi|297337356|gb|EFH67773.1| EMB1273 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 237

 Score =  165 bits (417), Expect = 4e-38
 Identities = 72/124 (58%), Positives = 93/124 (75%)
 Frame = +2

Query: 764  AVAKYLSVPLLALTSLSELSYCTHERKI*LVPIPLLTGIVVAGIFKDAALELYPQLKEGE 943
            +V K+L VP+LA++S+SE+SYC HERK+ LVP PL+ G+VVAGI ++ AL++ P+LKE E
Sbjct: 110  SVVKFLFVPILAVSSISEMSYCAHERKLALVPFPLVIGMVVAGILQETALKISPRLKEAE 169

Query: 944  FPWHLVSVAFFLVLLKLPGPYYPYWGRIFIPHFANGGLLRTLWSAIMWYKKPHVAPETTL 1123
             PWHL+++  F  L+KLPGPYYPYWGR+F+PHFANG L R LWS   WYKK       TL
Sbjct: 170  VPWHLIAMMMFFTLIKLPGPYYPYWGRLFVPHFANGVLFRALWSMFFWYKKTRNTSGNTL 229

Query: 1124 PQTS 1135
               S
Sbjct: 230  QNHS 233


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