BLASTX nr result

ID: Coptis25_contig00019613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019613
         (1077 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267265.1| PREDICTED: uncharacterized protein LOC100245...    83   1e-13
ref|XP_002267389.2| PREDICTED: uncharacterized protein LOC100258...    66   1e-08
emb|CBI39778.3| unnamed protein product [Vitis vinifera]               66   1e-08
emb|CAN73914.1| hypothetical protein VITISV_035233 [Vitis vinifera]    63   1e-07
ref|XP_002274314.2| PREDICTED: uncharacterized protein LOC100248...    60   1e-06

>ref|XP_002267265.1| PREDICTED: uncharacterized protein LOC100245992 [Vitis vinifera]
            gi|296085055|emb|CBI28470.3| unnamed protein product
            [Vitis vinifera]
          Length = 896

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 60/178 (33%), Positives = 87/178 (48%), Gaps = 8/178 (4%)
 Frame = +3

Query: 564  NEDAGDGGMSKVGKENGVIQGPKRGVTHSSLPTSQGTESKLLPSVSSFLSGVA-----TV 728
            + D G G  S   KENG+ Q  ++G+     PTSQ  ++K   +++S ++ +A     T 
Sbjct: 103  SHDTGGGRNSAPAKENGISQISEKGIAQ---PTSQEMKNKETTAIASSITVMADGPAVTT 159

Query: 729  SSKVTPRHVPKVPMRRGANTTKKPAVSDANELGSXXXXXXXXXXXXXXXFEVKTGHEQPT 908
            +   +  H     +          A +DAN+LG+               F       QPT
Sbjct: 160  TGNTSVVHTSHSTVASDVIHADLSASTDANKLGNSPSPSIDANKNPSIAFGTGDTCGQPT 219

Query: 909  PSSDHVASHV---SVLGVYSSASDPILVPSLDSRLPGTVGTTKREVGSQRTSNESSPL 1073
            P S + ++ V   S  G Y SASDP+LVPS DSR+   VGT KREVGSQRT  E++ +
Sbjct: 220  PGSSNCSASVTPASSSGGYFSASDPVLVPSHDSRISHAVGTIKREVGSQRTPVENNEI 277


>ref|XP_002267389.2| PREDICTED: uncharacterized protein LOC100258374 [Vitis vinifera]
          Length = 781

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 62/181 (34%), Positives = 84/181 (46%), Gaps = 11/181 (6%)
 Frame = +3

Query: 564  NEDAGDGGMSKVGKENGVIQGPKRGVTHSSLPTSQGTESKL----LPSVSSFLSGVATVS 731
            + DAG G  +   KENGV     RG THSSLP S+  ++      +P  S+  S  A+  
Sbjct: 106  SHDAGFG-RNAAQKENGVHPRTARGFTHSSLPLSRRAQNNATPPNVPKSSTVSSNGASSV 164

Query: 732  SKVTPRHVPKVPMRRGANTT--KKPAVSDANELGSXXXXXXXXXXXXXXX-----FEVKT 890
            S  +  HV    +  G   T  K  +V+  N+ G+                    F    
Sbjct: 165  SNGSSNHVLVPGLAAGDVNTIPKDNSVAIINKSGNGPSVLISGVECPPGTMPKHSFASVV 224

Query: 891  GHEQPTPSSDHVASHVSVLGVYSSASDPILVPSLDSRLPGTVGTTKREVGSQRTSNESSP 1070
            G +Q + +S    +  SV GVYSSASD +LVPS  S LP T+GT K EV SQ    E++ 
Sbjct: 225  GVKQGSSNSTSHTTPTSVSGVYSSASDSVLVPSPSSCLPDTMGTIKHEV-SQSAGVETNQ 283

Query: 1071 L 1073
            L
Sbjct: 284  L 284


>emb|CBI39778.3| unnamed protein product [Vitis vinifera]
          Length = 786

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 62/181 (34%), Positives = 84/181 (46%), Gaps = 11/181 (6%)
 Frame = +3

Query: 564  NEDAGDGGMSKVGKENGVIQGPKRGVTHSSLPTSQGTESKL----LPSVSSFLSGVATVS 731
            + DAG G  +   KENGV     RG THSSLP S+  ++      +P  S+  S  A+  
Sbjct: 111  SHDAGFG-RNAAQKENGVHPRTARGFTHSSLPLSRRAQNNATPPNVPKSSTVSSNGASSV 169

Query: 732  SKVTPRHVPKVPMRRGANTT--KKPAVSDANELGSXXXXXXXXXXXXXXX-----FEVKT 890
            S  +  HV    +  G   T  K  +V+  N+ G+                    F    
Sbjct: 170  SNGSSNHVLVPGLAAGDVNTIPKDNSVAIINKSGNGPSVLISGVECPPGTMPKHSFASVV 229

Query: 891  GHEQPTPSSDHVASHVSVLGVYSSASDPILVPSLDSRLPGTVGTTKREVGSQRTSNESSP 1070
            G +Q + +S    +  SV GVYSSASD +LVPS  S LP T+GT K EV SQ    E++ 
Sbjct: 230  GVKQGSSNSTSHTTPTSVSGVYSSASDSVLVPSPSSCLPDTMGTIKHEV-SQSAGVETNQ 288

Query: 1071 L 1073
            L
Sbjct: 289  L 289


>emb|CAN73914.1| hypothetical protein VITISV_035233 [Vitis vinifera]
          Length = 926

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 61/181 (33%), Positives = 83/181 (45%), Gaps = 11/181 (6%)
 Frame = +3

Query: 564  NEDAGDGGMSKVGKENGVIQGPKRGVTHSSLPTSQGTESKL----LPSVSSFLSGVATVS 731
            + DAG G  +   KENGV     RG THSSLP S+  ++      +P  S+  S  A+  
Sbjct: 242  SHDAGFG-RNAAQKENGVHPRTARGFTHSSLPLSRRAQNNATPPNVPKSSTVSSNGASSV 300

Query: 732  SKVTPRHVPKVPMRRGANTT--KKPAVSDANELGSXXXXXXXXXXXXXXX-----FEVKT 890
            S  +  HV    +  G   T  K  +V+  N+ G+                    F    
Sbjct: 301  SNGSSNHVLVPGLAAGDVNTIPKDNSVAIINKSGNGPSVLISGVECPPGTXPKHSFASVV 360

Query: 891  GHEQPTPSSDHVASHVSVLGVYSSASDPILVPSLDSRLPGTVGTTKREVGSQRTSNESSP 1070
            G +Q + +S    +  SV GVYSSASD +LV S  S LP T+GT K EV SQ    E++ 
Sbjct: 361  GVKQGSSNSTSHTTPTSVSGVYSSASDSVLVXSPSSCLPXTMGTIKHEV-SQSAGVETNQ 419

Query: 1071 L 1073
            L
Sbjct: 420  L 420


>ref|XP_002274314.2| PREDICTED: uncharacterized protein LOC100248075 [Vitis vinifera]
          Length = 860

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 7/173 (4%)
 Frame = +3

Query: 570  DAGDGGMSKVGKENGVIQGPKRGVTHSSLPTSQGTESKLLPSVSSFLSGVATVSSKVTPR 749
            DAG G   +V ++N V Q   R +   S   +     +++ ++S   +   T S+   P 
Sbjct: 120  DAGIGREFRVVRDNRVNQNTNRDMKPVSPQLATSVNEQVISNISEKGNSTGT-SNNQKPS 178

Query: 750  HVPKVPMRRGANTTKKPAV-SDANELGSXXXXXXXXXXXXXXXFEVKTGHEQPT---PSS 917
               +        T  +P +  DAN  GS                  +    +P    P S
Sbjct: 179  SGRQSSQSLNGPTDARPGIPQDANSSGSNRKELLEERQATIPNAVSRVQAVKPNDSQPYS 238

Query: 918  DHVASHVSVLGVYSSASDPILVPSLDSRLPGTVGTTKRE---VGSQRTSNESS 1067
              +AS+ SV+GVYSS+SDP+ VPS DSR    VG  KRE   VG +R S E+S
Sbjct: 239  ASLASNSSVVGVYSSSSDPVHVPSPDSRSSAIVGAIKREVGVVGVRRQSTENS 291


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