BLASTX nr result

ID: Coptis25_contig00019609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019609
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280078.1| PREDICTED: ribonuclease 3 [Vitis vinifera] g...   192   5e-47
gb|AFK47329.1| unknown [Lotus japonicus]                              190   2e-46
ref|NP_001236767.1| uncharacterized protein LOC100527745 precurs...   189   3e-46
ref|XP_002511429.1| conserved hypothetical protein [Ricinus comm...   181   1e-43
ref|XP_002318642.1| predicted protein [Populus trichocarpa] gi|2...   170   2e-40

>ref|XP_002280078.1| PREDICTED: ribonuclease 3 [Vitis vinifera]
           gi|297733813|emb|CBI15060.3| unnamed protein product
           [Vitis vinifera]
          Length = 183

 Score =  192 bits (488), Expect = 5e-47
 Identities = 94/155 (60%), Positives = 127/155 (81%), Gaps = 1/155 (0%)
 Frame = +3

Query: 63  MESTSPFSLALQTLQQQLGYNFKTVNLLRRAMTHPSFSGENNRALSILGLYAIETSISLH 242
           ++ +SPFSLAL+TLQ+Q+GY F+++ LLRRAMTH SFS ENN+ALSILG   IETS+SL 
Sbjct: 31  LKPSSPFSLALETLQKQIGYTFQSIGLLRRAMTHSSFSEENNKALSILGASTIETSVSLQ 90

Query: 243 CLERNIEMSPKELSRKVKEISEV-GTCAIDGTRLGLDKIVRVSTKTNSTVPSVVCGAFRA 419
            L+++IE S K+L+R++ EIS+V  +CA+D  RLGL K++RVS KTN++ P+VVCGAFRA
Sbjct: 91  YLKKDIEASAKDLNRRISEISQVESSCAVDAMRLGLQKVIRVSPKTNASTPAVVCGAFRA 150

Query: 420 VFGAIGVDAGNADDAGEVFWNVNHHGCGGGGASAM 524
           +FGAI +D G +DDAG+VFW+V  HG   GGA+A+
Sbjct: 151 IFGAIAMDTGKSDDAGKVFWSV--HGSEVGGAAAL 183


>gb|AFK47329.1| unknown [Lotus japonicus]
          Length = 179

 Score =  190 bits (482), Expect = 2e-46
 Identities = 93/150 (62%), Positives = 118/150 (78%), Gaps = 1/150 (0%)
 Frame = +3

Query: 75  SPFSLALQTLQQQLGYNFKTVNLLRRAMTHPSFSGENNRALSILGLYAIETSISLHCLER 254
           SPF  AL+TLQ+QLGYNFKT++LLRRAMTH SFS ENN+ALSILG   IETS S H + +
Sbjct: 30  SPFPSALETLQKQLGYNFKTISLLRRAMTHASFSEENNKALSILGAAVIETSASFHLISK 89

Query: 255 NIEMSPKELSRKVKEISEV-GTCAIDGTRLGLDKIVRVSTKTNSTVPSVVCGAFRAVFGA 431
           +I++S KEL+R++ ++S V  +CA+DG  LGL K+VRVS KTNS+ P+VVCGAFRA+FGA
Sbjct: 90  DIDISAKELNRRLSQVSNVESSCAVDGVHLGLHKVVRVSPKTNSSAPAVVCGAFRAIFGA 149

Query: 432 IGVDAGNADDAGEVFWNVNHHGCGGGGASA 521
           I +D G +DDAG VFW +  HG G  G +A
Sbjct: 150 IAIDTGKSDDAGNVFWTI--HGVGDVGVAA 177


>ref|NP_001236767.1| uncharacterized protein LOC100527745 precursor [Glycine max]
           gi|255633098|gb|ACU16904.1| unknown [Glycine max]
          Length = 188

 Score =  189 bits (481), Expect = 3e-46
 Identities = 91/150 (60%), Positives = 121/150 (80%), Gaps = 1/150 (0%)
 Frame = +3

Query: 72  TSPFSLALQTLQQQLGYNFKTVNLLRRAMTHPSFSGENNRALSILGLYAIETSISLHCLE 251
           +SPFS AL+TLQ+QLGY FK+++LLRRA+TH SFS ENN+A +ILG   IETS+S H L 
Sbjct: 38  SSPFSTALETLQKQLGYTFKSIDLLRRAVTHASFSEENNKAFAILGASVIETSVSFHLLS 97

Query: 252 RNIEMSPKELSRKVKEISEV-GTCAIDGTRLGLDKIVRVSTKTNSTVPSVVCGAFRAVFG 428
           R++++S KEL+R++ +I+ V  +CA+DGTRLGL K+VRVS KTNS+ P+VVCGAFRA+FG
Sbjct: 98  RDVDLSSKELNRRLSQITNVDSSCAVDGTRLGLHKVVRVSPKTNSSAPAVVCGAFRAIFG 157

Query: 429 AIGVDAGNADDAGEVFWNVNHHGCGGGGAS 518
           A+ +D G +DDAG VFWN+  HG G  G +
Sbjct: 158 AVAIDTGKSDDAGNVFWNL--HGGGDLGVA 185


>ref|XP_002511429.1| conserved hypothetical protein [Ricinus communis]
           gi|223550544|gb|EEF52031.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 185

 Score =  181 bits (459), Expect = 1e-43
 Identities = 93/152 (61%), Positives = 118/152 (77%), Gaps = 1/152 (0%)
 Frame = +3

Query: 69  STSPFSLALQTLQQQLGYNFKTVNLLRRAMTHPSFSGENNRALSILGLYAIETSISLHCL 248
           S+SPF+ AL+ LQ+Q+  N   V LLRRAMTHPSFS ENNRALS++G   I+T +SL  L
Sbjct: 36  SSSPFASALEALQKQIKQN---VGLLRRAMTHPSFSEENNRALSVMGSNVIDTFVSLFSL 92

Query: 249 ERNIEMSPKELSRKVKEISEVGT-CAIDGTRLGLDKIVRVSTKTNSTVPSVVCGAFRAVF 425
            ++I++S KEL+R++ EIS+V T CA+DG RLGLDK+VRVS KTNST P+VVCGAFRA+F
Sbjct: 93  RKDIDISSKELNRRIAEISKVETSCAVDGMRLGLDKVVRVSYKTNSTAPAVVCGAFRALF 152

Query: 426 GAIGVDAGNADDAGEVFWNVNHHGCGGGGASA 521
           GAI +D G +DDAG VFW V+ H    G A+A
Sbjct: 153 GAIAIDTGKSDDAGSVFWGVHSHNTISGKATA 184


>ref|XP_002318642.1| predicted protein [Populus trichocarpa] gi|222859315|gb|EEE96862.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  170 bits (431), Expect = 2e-40
 Identities = 84/140 (60%), Positives = 107/140 (76%), Gaps = 1/140 (0%)
 Frame = +3

Query: 72  TSPFSLALQTLQQQLGYNFKTVNLLRRAMTHPSFSGENNRALSILGLYAIETSISLHCLE 251
           +SPF  AL  LQ Q+GY FK +  LRRAMTH SFS ENN+ALSILG   I+TS+S++ L 
Sbjct: 30  SSPFESALDILQNQIGYTFKNIGYLRRAMTHSSFSQENNKALSILGSNVIDTSVSMYYLG 89

Query: 252 RNIEMSPKELSRKVKEISEVGT-CAIDGTRLGLDKIVRVSTKTNSTVPSVVCGAFRAVFG 428
           ++IE+S K+L+R + E ++V T CA+DG RLGL ++VRVS KTNST P+VVC AFRA+FG
Sbjct: 90  KDIEISSKDLNRWISENAKVDTSCAVDGMRLGLHRVVRVSPKTNSTAPTVVCSAFRAIFG 149

Query: 429 AIGVDAGNADDAGEVFWNVN 488
           AI +D    DDAG VFWNV+
Sbjct: 150 AIAIDTRKVDDAGSVFWNVH 169


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