BLASTX nr result

ID: Coptis25_contig00019598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019598
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524100.1| ATP-binding cassette transporter, putative [...   227   1e-57
emb|CBI39105.3| unnamed protein product [Vitis vinifera]              222   3e-56
dbj|BAJ88390.1| predicted protein [Hordeum vulgare subsp. vulgare]    221   1e-55
dbj|BAK06297.1| predicted protein [Hordeum vulgare subsp. vulgare]    221   1e-55
ref|XP_002309268.1| white-brown-complex ABC transporter family [...   221   1e-55

>ref|XP_002524100.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223536668|gb|EEF38310.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 749

 Score =  227 bits (578), Expect = 1e-57
 Identities = 109/151 (72%), Positives = 133/151 (88%), Gaps = 1/151 (0%)
 Frame = -2

Query: 601  LDLFLPIIFLVVVYFMAGLKASADAFFLSMLTVFLSIVAAQGLGLAIGATLMDIKKATTL 422
            LDL LP++FL+VVYFMAGL+ SA  FFLS+LTVFL IVAAQGLGLAIGATLMD+KKATTL
Sbjct: 599  LDLILPVLFLLVVYFMAGLRMSAGPFFLSLLTVFLCIVAAQGLGLAIGATLMDLKKATTL 658

Query: 421  ASVTGMTFMLAGGYFIKDVPVFISWIRYLSFNFHTYRILLKIQYQQV-PPVLGVKLGNCS 245
            ASVT MTFMLAGGYF+K VP+F++WIRYLSFN+HTY++LLK+QY+ + PP+ G+++GN  
Sbjct: 659  ASVTVMTFMLAGGYFVKKVPIFVAWIRYLSFNYHTYKLLLKVQYEDISPPINGIRIGNGV 718

Query: 244  REIGAMVAMVFGYRLLAYVSLRRMKL*SGAY 152
             E+ A+VAMVFGYRLLAY+SLR+MK   G Y
Sbjct: 719  TEVSALVAMVFGYRLLAYISLRKMKFNCGVY 749


>emb|CBI39105.3| unnamed protein product [Vitis vinifera]
          Length = 738

 Score =  222 bits (566), Expect = 3e-56
 Identities = 108/150 (72%), Positives = 133/150 (88%), Gaps = 1/150 (0%)
 Frame = -2

Query: 601  LDLFLPIIFLVVVYFMAGLKASADAFFLSMLTVFLSIVAAQGLGLAIGATLMDIKKATTL 422
            LDL LP++FL++VYFMAGL+  A +FFL+MLTVFL IVAAQGLGLAIGATLMD+K+ATTL
Sbjct: 589  LDLILPVLFLIIVYFMAGLRMDAGSFFLTMLTVFLCIVAAQGLGLAIGATLMDLKRATTL 648

Query: 421  ASVTGMTFMLAGGYFIKDVPVFISWIRYLSFNFHTYRILLKIQYQQVPP-VLGVKLGNCS 245
            ASVT MTFMLAGGYF+K VP+FISWIRY+SFN+HTY++LLK+QY+ + P V G+K+    
Sbjct: 649  ASVTVMTFMLAGGYFVKKVPIFISWIRYISFNYHTYKLLLKVQYEHITPNVNGMKIDGGL 708

Query: 244  REIGAMVAMVFGYRLLAYVSLRRMKL*SGA 155
            +E+ A+VAMVFGYRLLAY+SLRRMKL +GA
Sbjct: 709  KEVSALVAMVFGYRLLAYISLRRMKLHTGA 738


>dbj|BAJ88390.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 771

 Score =  221 bits (562), Expect = 1e-55
 Identities = 112/150 (74%), Positives = 131/150 (87%), Gaps = 2/150 (1%)
 Frame = -2

Query: 601  LDLFLPIIFLVVVYFMAGLKASADAFFLSMLTVFLSIVAAQGLGLAIGATLMDIKKATTL 422
            LDLFLP+IF+V+VYFMAGLKASA  FFLSMLTVFLSI+AAQGLGLAIGATL+DIKKATTL
Sbjct: 622  LDLFLPVIFMVIVYFMAGLKASAMHFFLSMLTVFLSIIAAQGLGLAIGATLLDIKKATTL 681

Query: 421  ASVTGMTFMLAGGYFIKDVPVFISWIRYLSFNFHTYRILLKIQYQQVPPVL--GVKLGNC 248
            ASVT MTFMLAGG+F+K VP FISW+RYLSFN+HTYR+LLK+QY  VP +L   V L N 
Sbjct: 682  ASVTVMTFMLAGGFFVKRVPPFISWLRYLSFNYHTYRLLLKVQYDPVPDILMTSVPLDNG 741

Query: 247  SREIGAMVAMVFGYRLLAYVSLRRMKL*SG 158
              E+GA+VAM+ GYR+LAY+SLRR+K  +G
Sbjct: 742  VTEVGALVAMIIGYRVLAYLSLRRVKASNG 771


>dbj|BAK06297.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 771

 Score =  221 bits (562), Expect = 1e-55
 Identities = 112/150 (74%), Positives = 131/150 (87%), Gaps = 2/150 (1%)
 Frame = -2

Query: 601  LDLFLPIIFLVVVYFMAGLKASADAFFLSMLTVFLSIVAAQGLGLAIGATLMDIKKATTL 422
            LDLFLP+IF+V+VYFMAGLKASA  FFLSMLTVFLSI+AAQGLGLAIGATL+DIKKATTL
Sbjct: 622  LDLFLPVIFMVIVYFMAGLKASAMHFFLSMLTVFLSIIAAQGLGLAIGATLLDIKKATTL 681

Query: 421  ASVTGMTFMLAGGYFIKDVPVFISWIRYLSFNFHTYRILLKIQYQQVPPVL--GVKLGNC 248
            ASVT MTFMLAGG+F+K VP FISW+RYLSFN+HTYR+LLK+QY  VP +L   V L N 
Sbjct: 682  ASVTVMTFMLAGGFFVKRVPPFISWLRYLSFNYHTYRLLLKVQYDPVPDILMTSVPLDNG 741

Query: 247  SREIGAMVAMVFGYRLLAYVSLRRMKL*SG 158
              E+GA+VAM+ GYR+LAY+SLRR+K  +G
Sbjct: 742  VTEVGALVAMIIGYRVLAYLSLRRVKASNG 771


>ref|XP_002309268.1| white-brown-complex ABC transporter family [Populus trichocarpa]
            gi|222855244|gb|EEE92791.1| white-brown-complex ABC
            transporter family [Populus trichocarpa]
          Length = 743

 Score =  221 bits (562), Expect = 1e-55
 Identities = 109/146 (74%), Positives = 132/146 (90%), Gaps = 1/146 (0%)
 Frame = -2

Query: 601  LDLFLPIIFLVVVYFMAGLKASADAFFLSMLTVFLSIVAAQGLGLAIGATLMDIKKATTL 422
            LDL LP++FL+VVYFMAGL+ SA  FFL+MLTVFLSI+AAQGLGLAIGATLMD+K+ATTL
Sbjct: 595  LDLVLPVLFLLVVYFMAGLRMSAAPFFLTMLTVFLSIIAAQGLGLAIGATLMDLKRATTL 654

Query: 421  ASVTGMTFMLAGGYFIKDVPVFISWIRYLSFNFHTYRILLKIQYQQVPPVL-GVKLGNCS 245
            ASVT MTFMLAGGYF+K VPVF+SWIRYLSFN+HTY++LLK+QY+ + PVL G+++ +  
Sbjct: 655  ASVTVMTFMLAGGYFVKRVPVFVSWIRYLSFNYHTYKLLLKVQYKHMTPVLNGMRIDSGL 714

Query: 244  REIGAMVAMVFGYRLLAYVSLRRMKL 167
             E+ A+VAMVFGYRLLAY+SLRRMKL
Sbjct: 715  TEVSALVAMVFGYRLLAYISLRRMKL 740


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