BLASTX nr result

ID: Coptis25_contig00019590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019590
         (2090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277576.1| PREDICTED: probable pectate lyase 4-like [Vi...   586   e-165
emb|CBI32661.3| unnamed protein product [Vitis vinifera]              584   e-164
gb|ABK96132.1| unknown [Populus trichocarpa]                          580   e-163
ref|XP_002309435.1| predicted protein [Populus trichocarpa] gi|2...   577   e-162
gb|ABK93648.1| unknown [Populus trichocarpa]                          575   e-161

>ref|XP_002277576.1| PREDICTED: probable pectate lyase 4-like [Vitis vinifera]
          Length = 373

 Score =  586 bits (1511), Expect = e-165
 Identities = 283/371 (76%), Positives = 312/371 (84%), Gaps = 3/371 (0%)
 Frame = -2

Query: 2086 HGRYTTSGQRDNT---RTQPNSHSRPHKNQNHPPTQSTNTMTSLPYAHVDSSLRALAAQA 1916
            HGR + + ++  T    T P++ +        P       M+ LPYAHVDS+LRALA QA
Sbjct: 5    HGRCSGTHRKHPTPAYTTFPDTTAPASAFGRDPSNTVRTNMSCLPYAHVDSNLRALAGQA 64

Query: 1915 EGFGRLAIGGLHGPLYHVTTLADDGPGSLRQGCRQKEPLWIVFEVSGTIHLSSYLTVSSF 1736
            EGFGRLAIGGLHGPLYHVTTLADDGPGSLR GCR+KEPLWIVFEVSG IHLSSYL VSS+
Sbjct: 65   EGFGRLAIGGLHGPLYHVTTLADDGPGSLRDGCRKKEPLWIVFEVSGIIHLSSYLNVSSY 124

Query: 1735 KTIDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGPDVDGIQIKPNSRHIWIDRCSLR 1556
            KTIDGRGQRIK TGKGLRLKECEHVIICNLEFEGGRGPDVDGIQIKPNS+HIWIDRCSLR
Sbjct: 125  KTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVDGIQIKPNSKHIWIDRCSLR 184

Query: 1555 DYEDGLIDITRESTDITISRCHFSGHDKTMLIGADPNHVGDRCIRVTIHHCFFDGTRQRH 1376
            D++DGLIDITR STDITISRCHFS HDKTMLIGADP+H GDRCIRVTIHHCFFDGTRQRH
Sbjct: 185  DFDDGLIDITRASTDITISRCHFSQHDKTMLIGADPSHTGDRCIRVTIHHCFFDGTRQRH 244

Query: 1375 PRVRYGKVHLYNNYTRDWGIYAVCISVDAQIYSQCNIYEAGKKKGTFKYLPEKAADKEEV 1196
            PRVRYGKVHLYNNYTR+WGIYAVC SV++QIYSQCNIYEAG KK  FKYL EKAADKEE 
Sbjct: 245  PRVRYGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGHKKVAFKYLTEKAADKEEE 304

Query: 1195 SSGWVISEGDLYLNGAQACLPKEAIKDCTFHPSEFYPTWTTEAPSESLKEVLRHCTGWQS 1016
             +G + SEGDL++NG QA L   A +   FHP EFYPTWT EAPS++LK+VL HCTGWQ 
Sbjct: 305  RTGCLRSEGDLFINGTQAGLMTVASE--MFHPREFYPTWTVEAPSDALKQVLHHCTGWQC 362

Query: 1015 IPRPAEKTVIA 983
            +PRPA++  IA
Sbjct: 363  VPRPADEAAIA 373


>emb|CBI32661.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  584 bits (1505), Expect = e-164
 Identities = 276/331 (83%), Positives = 298/331 (90%)
 Frame = -2

Query: 1975 MTSLPYAHVDSSLRALAAQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLRQGCRQKEPLW 1796
            M+ LPYAHVDS+LRALA QAEGFGRLAIGGLHGPLYHVTTLADDGPGSLR GCR+KEPLW
Sbjct: 1    MSCLPYAHVDSNLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLRDGCRKKEPLW 60

Query: 1795 IVFEVSGTIHLSSYLTVSSFKTIDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGPDV 1616
            IVFEVSG IHLSSYL VSS+KTIDGRGQRIK TGKGLRLKECEHVIICNLEFEGGRGPDV
Sbjct: 61   IVFEVSGIIHLSSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDV 120

Query: 1615 DGIQIKPNSRHIWIDRCSLRDYEDGLIDITRESTDITISRCHFSGHDKTMLIGADPNHVG 1436
            DGIQIKPNS+HIWIDRCSLRD++DGLIDITR STDITISRCHFS HDKTMLIGADP+H G
Sbjct: 121  DGIQIKPNSKHIWIDRCSLRDFDDGLIDITRASTDITISRCHFSQHDKTMLIGADPSHTG 180

Query: 1435 DRCIRVTIHHCFFDGTRQRHPRVRYGKVHLYNNYTRDWGIYAVCISVDAQIYSQCNIYEA 1256
            DRCIRVTIHHCFFDGTRQRHPRVRYGKVHLYNNYTR+WGIYAVC SV++QIYSQCNIYEA
Sbjct: 181  DRCIRVTIHHCFFDGTRQRHPRVRYGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEA 240

Query: 1255 GKKKGTFKYLPEKAADKEEVSSGWVISEGDLYLNGAQACLPKEAIKDCTFHPSEFYPTWT 1076
            G KK  FKYL EKAADKEE  +G + SEGDL++NG QA L   A +   FHP EFYPTWT
Sbjct: 241  GHKKVAFKYLTEKAADKEEERTGCLRSEGDLFINGTQAGLMTVASE--MFHPREFYPTWT 298

Query: 1075 TEAPSESLKEVLRHCTGWQSIPRPAEKTVIA 983
             EAPS++LK+VL HCTGWQ +PRPA++  IA
Sbjct: 299  VEAPSDALKQVLHHCTGWQCVPRPADEAAIA 329


>gb|ABK96132.1| unknown [Populus trichocarpa]
          Length = 389

 Score =  580 bits (1496), Expect = e-163
 Identities = 277/382 (72%), Positives = 313/382 (81%), Gaps = 14/382 (3%)
 Frame = -2

Query: 2086 HGRYTTSGQRDNTRTQPNSHSRPHKNQNHPPT--------------QSTNTMTSLPYAHV 1949
            HG +       N  +   + S P  +Q  PP+               +++  TSLPY+HV
Sbjct: 7    HGHHRKFRNNGNVPSPDKTASAPSPSQPVPPSIYQPEHPLIPNSSIHASSMATSLPYSHV 66

Query: 1948 DSSLRALAAQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLRQGCRQKEPLWIVFEVSGTI 1769
            DS+LRALAAQAEGFGR AIGGLHGP+Y+VTTL DDGPGSLR GCR+KEPLWIVFEVSGTI
Sbjct: 67   DSALRALAAQAEGFGRCAIGGLHGPIYYVTTLLDDGPGSLRDGCRKKEPLWIVFEVSGTI 126

Query: 1768 HLSSYLTVSSFKTIDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGPDVDGIQIKPNS 1589
             L SYL VSS+KTIDGRGQRIK TGKGLRLKECEHVIICNLEFEGGRGPDVDGIQIKP S
Sbjct: 127  QLGSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVDGIQIKPKS 186

Query: 1588 RHIWIDRCSLRDYEDGLIDITRESTDITISRCHFSGHDKTMLIGADPNHVGDRCIRVTIH 1409
            +HIWIDRCSLRDY+DGLIDI RESTDIT+SRCHF+ HDKT+LIGADP HVGDRCIRVTIH
Sbjct: 187  KHIWIDRCSLRDYDDGLIDINRESTDITVSRCHFAQHDKTILIGADPTHVGDRCIRVTIH 246

Query: 1408 HCFFDGTRQRHPRVRYGKVHLYNNYTRDWGIYAVCISVDAQIYSQCNIYEAGKKKGTFKY 1229
            HCFFDGTRQRHPRVR+GKVHLYNNY R+WGIYAVC SV++QIYSQCNIYEAG+KK  FKY
Sbjct: 247  HCFFDGTRQRHPRVRFGKVHLYNNYIRNWGIYAVCASVESQIYSQCNIYEAGQKKIAFKY 306

Query: 1228 LPEKAADKEEVSSGWVISEGDLYLNGAQACLPKEAIKDCTFHPSEFYPTWTTEAPSESLK 1049
            L EKAADKEE SSG + SEGDL++ GAQA L  E  + C FHPSE+YPTWT E P++SLK
Sbjct: 307  LSEKAADKEEASSGCIRSEGDLFVIGAQAGLMAEDGEFCMFHPSEYYPTWTIEPPTDSLK 366

Query: 1048 EVLRHCTGWQSIPRPAEKTVIA 983
            +VL+HCTGWQ +PRPA+  + A
Sbjct: 367  QVLQHCTGWQCVPRPADHPLAA 388


>ref|XP_002309435.1| predicted protein [Populus trichocarpa] gi|222855411|gb|EEE92958.1|
            predicted protein [Populus trichocarpa]
          Length = 333

 Score =  577 bits (1486), Expect = e-162
 Identities = 269/330 (81%), Positives = 297/330 (90%)
 Frame = -2

Query: 1972 TSLPYAHVDSSLRALAAQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLRQGCRQKEPLWI 1793
            TSLPY+HVDS+LRALAAQAEGFGR AIGGLHGP+Y+VTTL DDGPGSLR GCR+KEPLWI
Sbjct: 3    TSLPYSHVDSALRALAAQAEGFGRCAIGGLHGPIYYVTTLLDDGPGSLRDGCRKKEPLWI 62

Query: 1792 VFEVSGTIHLSSYLTVSSFKTIDGRGQRIKFTGKGLRLKECEHVIICNLEFEGGRGPDVD 1613
            VFEVSGTI L SYL VSS+KTIDGRGQRIK TGKGLRLKECEHVIICNLEFEGGRGPDVD
Sbjct: 63   VFEVSGTIQLGSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVD 122

Query: 1612 GIQIKPNSRHIWIDRCSLRDYEDGLIDITRESTDITISRCHFSGHDKTMLIGADPNHVGD 1433
            GIQIKP S+HIWIDRCSLRDY+DGLIDI RESTDIT+SRCHF+ HDKT+LIGADP HVGD
Sbjct: 123  GIQIKPKSKHIWIDRCSLRDYDDGLIDINRESTDITVSRCHFAQHDKTILIGADPTHVGD 182

Query: 1432 RCIRVTIHHCFFDGTRQRHPRVRYGKVHLYNNYTRDWGIYAVCISVDAQIYSQCNIYEAG 1253
            RCIRVTIHHCFFDGTRQRHPRVR+GKVHLYNNY R+WGIYAVC SV++QIYSQCNIYEAG
Sbjct: 183  RCIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYIRNWGIYAVCASVESQIYSQCNIYEAG 242

Query: 1252 KKKGTFKYLPEKAADKEEVSSGWVISEGDLYLNGAQACLPKEAIKDCTFHPSEFYPTWTT 1073
            +KK  FKYL EKAADKEE SSG + SEGDL++ GAQA L  E  + C FHPSE+YPTWT 
Sbjct: 243  QKKIAFKYLSEKAADKEEASSGCIRSEGDLFVIGAQAGLMTEDGEVCMFHPSEYYPTWTV 302

Query: 1072 EAPSESLKEVLRHCTGWQSIPRPAEKTVIA 983
            E P++SLK+VL+HCTGWQ +PRPA+  + A
Sbjct: 303  EPPTDSLKQVLQHCTGWQCVPRPADHPLAA 332


>gb|ABK93648.1| unknown [Populus trichocarpa]
          Length = 386

 Score =  575 bits (1483), Expect = e-161
 Identities = 278/363 (76%), Positives = 307/363 (84%), Gaps = 5/363 (1%)
 Frame = -2

Query: 2056 DNTRTQPNSHSR--PHKNQNHPPTQSTNT---MTSLPYAHVDSSLRALAAQAEGFGRLAI 1892
            D T   P++     P   Q   PT ST T    T+LPY HVDSSLRALAAQAEGFGR A 
Sbjct: 23   DKTAAVPSASQPVPPFIYQPQIPTSSTRTPKMATALPYPHVDSSLRALAAQAEGFGRSAN 82

Query: 1891 GGLHGPLYHVTTLADDGPGSLRQGCRQKEPLWIVFEVSGTIHLSSYLTVSSFKTIDGRGQ 1712
            GGLHGP+Y+VTTLADDGPGSLR GCR+KEPLWIVFEVSGTI L SYL VSS+KTIDGRGQ
Sbjct: 83   GGLHGPIYYVTTLADDGPGSLRDGCRKKEPLWIVFEVSGTIQLRSYLNVSSYKTIDGRGQ 142

Query: 1711 RIKFTGKGLRLKECEHVIICNLEFEGGRGPDVDGIQIKPNSRHIWIDRCSLRDYEDGLID 1532
            RIK TGKGLRLKECEHVIICNLEFEGGRGPDVDGIQIKP S+HIWIDRCSLRDY+DGLID
Sbjct: 143  RIKLTGKGLRLKECEHVIICNLEFEGGRGPDVDGIQIKPKSKHIWIDRCSLRDYDDGLID 202

Query: 1531 ITRESTDITISRCHFSGHDKTMLIGADPNHVGDRCIRVTIHHCFFDGTRQRHPRVRYGKV 1352
            ITRESTDITISRC+F  HDKTMLIGADP HVGDRCIRVTIHHCFFDGTRQRHPRVR+GKV
Sbjct: 203  ITRESTDITISRCYFGQHDKTMLIGADPTHVGDRCIRVTIHHCFFDGTRQRHPRVRFGKV 262

Query: 1351 HLYNNYTRDWGIYAVCISVDAQIYSQCNIYEAGKKKGTFKYLPEKAADKEEVSSGWVISE 1172
            HLYNNYTR+WGIYAVC SV++QIYSQ NIYEAG+KK  FKYL EKAADKE+  SG + SE
Sbjct: 263  HLYNNYTRNWGIYAVCASVESQIYSQSNIYEAGQKKIAFKYLSEKAADKEKARSGSIRSE 322

Query: 1171 GDLYLNGAQACLPKEAIKDCTFHPSEFYPTWTTEAPSESLKEVLRHCTGWQSIPRPAEKT 992
            GDL++ G QA L  E  + C FHPSE+YPTWT E P++SLK+VL+HCTGWQ +PRPA++ 
Sbjct: 323  GDLFVTGTQAGLMTEDGECCMFHPSEYYPTWTVEPPTDSLKQVLQHCTGWQCVPRPADQP 382

Query: 991  VIA 983
            + A
Sbjct: 383  LAA 385


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