BLASTX nr result

ID: Coptis25_contig00019583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019583
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159453.1| PREDICTED: uncharacterized LOC101212713 [Cuc...   189   2e-46
ref|XP_004140920.1| PREDICTED: uncharacterized protein LOC101212...   189   2e-46
ref|XP_002263208.1| PREDICTED: TIM21-like protein, mitochondrial...   188   4e-46
gb|ADE77049.1| unknown [Picea sitchensis]                             186   2e-45
ref|XP_002465542.1| hypothetical protein SORBIDRAFT_01g040840 [S...   179   2e-43

>ref|XP_004159453.1| PREDICTED: uncharacterized LOC101212713 [Cucumis sativus]
          Length = 323

 Score =  189 bits (480), Expect = 2e-46
 Identities = 94/153 (61%), Positives = 114/153 (74%)
 Frame = -3

Query: 461 PCFTRSLASISDSHLSGQTQQQHRKXXXXXXXXXXXPTYNIPEEPVTFVEGASYSVFILA 282
           PCF R ++S S S   GQT+ + +K           PTYNIPE+PVTF EGASYS  ILA
Sbjct: 135 PCFARFMSSKS-SEKRGQTESESKKEISTVEDPFDAPTYNIPEKPVTFAEGASYSFIILA 193

Query: 281 GFGVATVCGYFAINELLMESKEHKVFGKALERVRNDNQVRARIGSPISGYGQESRNRHAR 102
           G GVA   GY    EL+ + KE+K+F KAL+R+++D+QVR RIGSPI+GYGQE+RNR AR
Sbjct: 194 GLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDSQVRVRIGSPITGYGQETRNRAAR 253

Query: 101 QQIPNRKWTDEDGVQRVEVNFCIRGPHGAGIVF 3
           Q+IPNR WTDEDGV+RVEVNF IRGPHGAG V+
Sbjct: 254 QRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVY 286


>ref|XP_004140920.1| PREDICTED: uncharacterized protein LOC101212713 [Cucumis sativus]
          Length = 323

 Score =  189 bits (480), Expect = 2e-46
 Identities = 94/153 (61%), Positives = 114/153 (74%)
 Frame = -3

Query: 461 PCFTRSLASISDSHLSGQTQQQHRKXXXXXXXXXXXPTYNIPEEPVTFVEGASYSVFILA 282
           PCF R ++S S S   GQT+ + +K           PTYNIPE+PVTF EGASYS  ILA
Sbjct: 135 PCFARFMSSKS-SEKRGQTESESKKEISTVEDPFDAPTYNIPEKPVTFAEGASYSFIILA 193

Query: 281 GFGVATVCGYFAINELLMESKEHKVFGKALERVRNDNQVRARIGSPISGYGQESRNRHAR 102
           G GVA   GY    EL+ + KE+K+F KAL+R+++D+QVR RIGSPI+GYGQE+RNR AR
Sbjct: 194 GLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDSQVRVRIGSPITGYGQETRNRAAR 253

Query: 101 QQIPNRKWTDEDGVQRVEVNFCIRGPHGAGIVF 3
           Q+IPNR WTDEDGV+RVEVNF IRGPHGAG V+
Sbjct: 254 QRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVY 286


>ref|XP_002263208.1| PREDICTED: TIM21-like protein, mitochondrial [Vitis vinifera]
           gi|296088479|emb|CBI37470.3| unnamed protein product
           [Vitis vinifera]
          Length = 314

 Score =  188 bits (477), Expect = 4e-46
 Identities = 97/160 (60%), Positives = 113/160 (70%)
 Frame = -3

Query: 482 NGGLPVLPCFTRSLASISDSHLSGQTQQQHRKXXXXXXXXXXXPTYNIPEEPVTFVEGAS 303
           +G   V+PCF RS AS + S    + Q + RK           PTYNIPE+PVTF EGAS
Sbjct: 119 HGKSTVVPCFARSCASTA-SKSPEEKQSETRKDISTVEDPFDAPTYNIPEKPVTFAEGAS 177

Query: 302 YSVFILAGFGVATVCGYFAINELLMESKEHKVFGKALERVRNDNQVRARIGSPISGYGQE 123
           YSV IL G G+A   GY    EL+ E KE+K+FGKAL+RV+ D QVR RIGSPI+GYGQE
Sbjct: 178 YSVIILVGLGIAAAAGYAVFKELIFEPKEYKIFGKALKRVQEDGQVRVRIGSPITGYGQE 237

Query: 122 SRNRHARQQIPNRKWTDEDGVQRVEVNFCIRGPHGAGIVF 3
           SRNR ARQ+I NR WTDEDGV+ VEVNF IRGPHGAG V+
Sbjct: 238 SRNRAARQRISNRIWTDEDGVEHVEVNFYIRGPHGAGKVY 277


>gb|ADE77049.1| unknown [Picea sitchensis]
          Length = 252

 Score =  186 bits (471), Expect = 2e-45
 Identities = 95/156 (60%), Positives = 110/156 (70%), Gaps = 1/156 (0%)
 Frame = -3

Query: 467 VLPCFTRSLASISDSHLSGQTQQQ-HRKXXXXXXXXXXXPTYNIPEEPVTFVEGASYSVF 291
           ++PC  RSLAS S +    QTQQQ H K            T  IP +PVTFVEGASYSV 
Sbjct: 60  MIPCSARSLASSSTTQAHQQTQQQRHNKDITTQEDPFDPLTDQIPVKPVTFVEGASYSVV 119

Query: 290 ILAGFGVATVCGYFAINELLMESKEHKVFGKALERVRNDNQVRARIGSPISGYGQESRNR 111
           I  G  +A    Y    EL+ E KE+K+FGKALERV+ D+QV+ RIGSPI+GYGQESRNR
Sbjct: 120 IFVGLAIAGAAAYAVFKELIFEPKEYKIFGKALERVQQDSQVKVRIGSPITGYGQESRNR 179

Query: 110 HARQQIPNRKWTDEDGVQRVEVNFCIRGPHGAGIVF 3
            ARQ+IPNR WTDEDGV+RVEVNF IRGPHGAG V+
Sbjct: 180 AARQRIPNRTWTDEDGVERVEVNFYIRGPHGAGKVY 215


>ref|XP_002465542.1| hypothetical protein SORBIDRAFT_01g040840 [Sorghum bicolor]
           gi|241919396|gb|EER92540.1| hypothetical protein
           SORBIDRAFT_01g040840 [Sorghum bicolor]
          Length = 286

 Score =  179 bits (454), Expect = 2e-43
 Identities = 90/155 (58%), Positives = 109/155 (70%)
 Frame = -3

Query: 467 VLPCFTRSLASISDSHLSGQTQQQHRKXXXXXXXXXXXPTYNIPEEPVTFVEGASYSVFI 288
           V PC  R  AS S    + Q  +Q  K            TYNIPE+PVTF EGASYS+ I
Sbjct: 95  VFPCSVRPCASYSTQ--ADQKAKQEGKDLSTVEHPFDDITYNIPEKPVTFTEGASYSLVI 152

Query: 287 LAGFGVATVCGYFAINELLMESKEHKVFGKALERVRNDNQVRARIGSPISGYGQESRNRH 108
           LAG G+A V GY    EL+ E KE+K+FGKAL R+++D+QV +RIG PI+GYGQE+RNR 
Sbjct: 153 LAGLGIAGVAGYAVFKELIFEPKEYKIFGKALARIQSDSQVTSRIGHPITGYGQETRNRA 212

Query: 107 ARQQIPNRKWTDEDGVQRVEVNFCIRGPHGAGIVF 3
           ARQ+IPN+ WTDEDGV+ VEVNF IRGPHGAG V+
Sbjct: 213 ARQRIPNKIWTDEDGVEHVEVNFLIRGPHGAGKVY 247


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