BLASTX nr result
ID: Coptis25_contig00019580
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00019580 (369 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 136 6e-37 emb|CAN70570.1| hypothetical protein VITISV_043111 [Vitis vinifera] 130 4e-36 emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera] 130 6e-36 emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 130 8e-36 emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera] 131 1e-35 >gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] Length = 1415 Score = 136 bits (343), Expect(2) = 6e-37 Identities = 58/96 (60%), Positives = 76/96 (79%) Frame = +1 Query: 82 RMRCMLSHSKLFRSYWVETMRTAVHVINLSPSKSLNSDYPERVWSSKDVDYGYLRVFGCR 261 R+RCML +KL S+W E + TAVHVINLSP +L ++ P++VW KDV Y +LRVFGC+ Sbjct: 590 RVRCMLDDAKLPSSFWAEAVSTAVHVINLSPVIALKNEVPDKVWCGKDVSYDHLRVFGCK 649 Query: 262 VFVHIPKDERSKFDDKAKQCIFLGYGDEKFGYKLYD 369 FVH+P+DERSK D K +QCIF+GYG ++FGY+LYD Sbjct: 650 AFVHVPRDERSKLDSKTRQCIFIGYGFDEFGYRLYD 685 Score = 42.7 bits (99), Expect(2) = 6e-37 Identities = 18/27 (66%), Positives = 23/27 (85%) Frame = +3 Query: 3 GIRHEQTVPKTPQQNGIAKRMNSTIVE 83 GIRH++T PK PQ NG+A+RMN TI+E Sbjct: 563 GIRHQKTPPKIPQLNGLAERMNRTIME 589 >emb|CAN70570.1| hypothetical protein VITISV_043111 [Vitis vinifera] Length = 891 Score = 130 bits (326), Expect(2) = 4e-36 Identities = 59/96 (61%), Positives = 71/96 (73%) Frame = +1 Query: 82 RMRCMLSHSKLFRSYWVETMRTAVHVINLSPSKSLNSDYPERVWSSKDVDYGYLRVFGCR 261 R+RCMLSH+KL +SYW E MR + +INLSPS L D P RV K V + +LRVFGCR Sbjct: 223 RIRCMLSHAKLSKSYWSEAMRITIDLINLSPSYPLKGDIPRRVQIRKFVSFEHLRVFGCR 282 Query: 262 VFVHIPKDERSKFDDKAKQCIFLGYGDEKFGYKLYD 369 FVH+P+DE+SK D K KQCIFLGY +E FGY L+D Sbjct: 283 TFVHVPRDEQSKLDSKTKQCIFLGYSNENFGYMLWD 318 Score = 46.6 bits (109), Expect(2) = 4e-36 Identities = 21/25 (84%), Positives = 23/25 (92%) Frame = +3 Query: 3 GIRHEQTVPKTPQQNGIAKRMNSTI 77 GIR E+TVPKTPQQNG+AKRMN TI Sbjct: 196 GIRLEKTVPKTPQQNGVAKRMNRTI 220 >emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera] Length = 1302 Score = 130 bits (327), Expect(2) = 6e-36 Identities = 53/96 (55%), Positives = 73/96 (76%) Frame = +1 Query: 82 RMRCMLSHSKLFRSYWVETMRTAVHVINLSPSKSLNSDYPERVWSSKDVDYGYLRVFGCR 261 R+RC+LS S+L RS+W E + T VHV+NL+P L D P+R+WS+ ++ Y +LRVFGC+ Sbjct: 459 RVRCLLSQSQLPRSFWGEALNTVVHVLNLTPCVPLEFDVPDRIWSNNEISYDHLRVFGCK 518 Query: 262 VFVHIPKDERSKFDDKAKQCIFLGYGDEKFGYKLYD 369 FVHIPKDERSK D K + C+F+GYG ++ GY+ YD Sbjct: 519 AFVHIPKDERSKLDAKTRPCVFIGYGQDELGYRFYD 554 Score = 45.4 bits (106), Expect(2) = 6e-36 Identities = 19/27 (70%), Positives = 24/27 (88%) Frame = +3 Query: 3 GIRHEQTVPKTPQQNGIAKRMNSTIVE 83 GIRH++T PKTPQ NG+A+RMN T+VE Sbjct: 432 GIRHQKTPPKTPQLNGLAERMNRTLVE 458 >emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] Length = 1207 Score = 130 bits (326), Expect(2) = 8e-36 Identities = 53/96 (55%), Positives = 72/96 (75%) Frame = +1 Query: 82 RMRCMLSHSKLFRSYWVETMRTAVHVINLSPSKSLNSDYPERVWSSKDVDYGYLRVFGCR 261 R+RC+LS S+L RS+W E + T VHV+NL+P L D P+R+WS ++ Y +LRVFGC+ Sbjct: 475 RVRCLLSQSQLPRSFWGEALNTVVHVLNLTPCVPLEFDVPDRIWSKNEISYDHLRVFGCK 534 Query: 262 VFVHIPKDERSKFDDKAKQCIFLGYGDEKFGYKLYD 369 FVHIPKDERSK D K + C+F+GYG ++ GY+ YD Sbjct: 535 AFVHIPKDERSKLDAKTRPCVFIGYGQDELGYRFYD 570 Score = 45.4 bits (106), Expect(2) = 8e-36 Identities = 19/27 (70%), Positives = 24/27 (88%) Frame = +3 Query: 3 GIRHEQTVPKTPQQNGIAKRMNSTIVE 83 GIRH++T PKTPQ NG+A+RMN T+VE Sbjct: 448 GIRHQKTSPKTPQLNGLAERMNRTLVE 474 >emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera] Length = 1362 Score = 131 bits (329), Expect(2) = 1e-35 Identities = 54/96 (56%), Positives = 73/96 (76%) Frame = +1 Query: 82 RMRCMLSHSKLFRSYWVETMRTAVHVINLSPSKSLNSDYPERVWSSKDVDYGYLRVFGCR 261 R+RC+LS S+L RS+W E + T VHV+NL+P L D P+R+WS+ ++ Y +LRVFGC+ Sbjct: 572 RVRCLLSQSQLPRSFWGEALNTIVHVLNLTPCVPLEFDVPDRIWSNNEISYDHLRVFGCK 631 Query: 262 VFVHIPKDERSKFDDKAKQCIFLGYGDEKFGYKLYD 369 FVHIPKDERSK D K + C+F+GYG ++ GYK YD Sbjct: 632 AFVHIPKDERSKLDAKTRPCVFIGYGQDELGYKFYD 667 Score = 43.9 bits (102), Expect(2) = 1e-35 Identities = 18/27 (66%), Positives = 23/27 (85%) Frame = +3 Query: 3 GIRHEQTVPKTPQQNGIAKRMNSTIVE 83 G RH++T PKTPQ NG+A+RMN T+VE Sbjct: 545 GFRHQKTPPKTPQLNGLAERMNRTLVE 571