BLASTX nr result

ID: Coptis25_contig00019577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019577
         (1538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266396.1| PREDICTED: protein brittle-1, chloroplastic/...   466   e-133
ref|XP_002513312.1| Mitochondrial deoxynucleotide carrier, putat...   476   e-132
gb|ABK96044.1| unknown [Populus trichocarpa]                          474   e-132
emb|CAN64851.1| hypothetical protein VITISV_024610 [Vitis vinifera]   463   e-131
ref|XP_002311894.1| predicted protein [Populus trichocarpa] gi|2...   474   e-131

>ref|XP_002266396.1| PREDICTED: protein brittle-1, chloroplastic/amyloplastic isoform 1
            [Vitis vinifera] gi|297735760|emb|CBI18447.3| unnamed
            protein product [Vitis vinifera]
          Length = 356

 Score =  466 bits (1198), Expect(2) = e-133
 Identities = 229/302 (75%), Positives = 258/302 (85%)
 Frame = +2

Query: 308  RSREVREFFSGALAGAMTKAVLGPLETIRTRMVVGVGPRNIAGSFIEVIEQQGWTGLWAG 487
            R+REV EF SGALAGAMTKAVL PLETIRTRMVVG+G +NI+GSF+EVIEQQGW GLWAG
Sbjct: 55   RTREVGEFISGALAGAMTKAVLAPLETIRTRMVVGIGSKNISGSFLEVIEQQGWQGLWAG 114

Query: 488  NTVNMLRIIPTQAIELGTFECVKRAVTSAKEKCKQNGGSKLQIGHVSLDVSLSWISPXXX 667
            NT+NMLRIIPTQAIEL TFECVKR++T A+EK  +    KLQIG VSL++S+SWISP   
Sbjct: 115  NTINMLRIIPTQAIELATFECVKRSMTEAQEKWSKKECPKLQIGPVSLNLSISWISPIAV 174

Query: 668  XXXXXXXXSTLVCHPLEVLKDRLTISREAYPTISLALKKMYRDGGIGGMYAGLCPTLIGM 847
                    STL CHPLEVLKDRLT+S + YP+IS+AL K++ DGGIG  YAG+ PTLIGM
Sbjct: 175  AGAAAGIVSTLACHPLEVLKDRLTVSPDIYPSISVALSKIHNDGGIGAFYAGISPTLIGM 234

Query: 848  LPYSTCYYFMYETVKNSYCQAKKKKKLNRAEMLVLGALSGLTASTISFPLEVARKRLMVG 1027
            LPYSTCYYFMYET+K SYC AKKK  L+R EML++GALSG TASTISFPLEVARKRLMVG
Sbjct: 235  LPYSTCYYFMYETMKKSYCTAKKKTSLSRPEMLLIGALSGFTASTISFPLEVARKRLMVG 294

Query: 1028 ALQGKCPANMAAALSEVIREEGLRGLYRGWGASCLKVMPSSGITWMFYEAWKDILVIEKN 1207
            ALQGKCP +MAAALSEVIRE+G+ GLYRGWGASCLKVMPSSGITWMFYEAWKDIL+ E+ 
Sbjct: 295  ALQGKCPPHMAAALSEVIREQGIMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLAERR 354

Query: 1208 LL 1213
             L
Sbjct: 355  HL 356



 Score = 36.6 bits (83), Expect(2) = e-133
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = +3

Query: 33  MVQKTPSQKKNYCVMGDVYGXXXXXXXXXXXXDTSFNAADLKFQLPNVGKATKEF 197
           M  ++ SQKK+Y V GDVYG            D S +    +FQLP++ +A ++F
Sbjct: 1   MALESESQKKSYGVFGDVYGVMMVPKELEIEKDASID--QFRFQLPDLKQAFQDF 53


>ref|XP_002513312.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis]
            gi|223547220|gb|EEF48715.1| Mitochondrial deoxynucleotide
            carrier, putative [Ricinus communis]
          Length = 375

 Score =  476 bits (1225), Expect = e-132
 Identities = 232/302 (76%), Positives = 261/302 (86%)
 Frame = +2

Query: 308  RSREVREFFSGALAGAMTKAVLGPLETIRTRMVVGVGPRNIAGSFIEVIEQQGWTGLWAG 487
            R+REV EF SGALAGAMTKAVL PLETIRTRMVVGVG +NI+GSF+E+IE+QGW GLWAG
Sbjct: 74   RTREVGEFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFLEIIEKQGWQGLWAG 133

Query: 488  NTVNMLRIIPTQAIELGTFECVKRAVTSAKEKCKQNGGSKLQIGHVSLDVSLSWISPXXX 667
            N +NMLRIIPTQAIELGTFECVKR +T A+EK  + G  ++QIG VSL+ SLSW+SP   
Sbjct: 134  NAINMLRIIPTQAIELGTFECVKRTMTLAQEKWNETGCPRVQIGPVSLNFSLSWVSPVAV 193

Query: 668  XXXXXXXXSTLVCHPLEVLKDRLTISREAYPTISLALKKMYRDGGIGGMYAGLCPTLIGM 847
                    STLVCHPLEVLKDRLTIS + YP++S+A+ K+Y DGGIG  YAG+ PTLIGM
Sbjct: 194  AGAAAGIVSTLVCHPLEVLKDRLTISPDTYPSLSIAISKIYSDGGIGAFYAGISPTLIGM 253

Query: 848  LPYSTCYYFMYETVKNSYCQAKKKKKLNRAEMLVLGALSGLTASTISFPLEVARKRLMVG 1027
            LPYSTCYYFMYET+K SYC+ KKKK LNR EML++GAL+G TASTISFPLEVARKRLMVG
Sbjct: 254  LPYSTCYYFMYETMKKSYCETKKKKSLNRPEMLLVGALAGFTASTISFPLEVARKRLMVG 313

Query: 1028 ALQGKCPANMAAALSEVIREEGLRGLYRGWGASCLKVMPSSGITWMFYEAWKDILVIEKN 1207
            ALQGKCP +MAAALSEVIREEGL GLYRGWGASCLKVMPSSGITWMFYEAWKDIL++EK 
Sbjct: 314  ALQGKCPPHMAAALSEVIREEGLLGLYRGWGASCLKVMPSSGITWMFYEAWKDILLVEKR 373

Query: 1208 LL 1213
            LL
Sbjct: 374  LL 375


>gb|ABK96044.1| unknown [Populus trichocarpa]
          Length = 365

 Score =  474 bits (1219), Expect(2) = e-132
 Identities = 231/302 (76%), Positives = 259/302 (85%)
 Frame = +2

Query: 308  RSREVREFFSGALAGAMTKAVLGPLETIRTRMVVGVGPRNIAGSFIEVIEQQGWTGLWAG 487
            RSRE  EF SGALAGAMTKAVL PLETIRTRMVVGVG +NI+GSF+EVIEQQGW GLWAG
Sbjct: 64   RSREAGEFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFLEVIEQQGWQGLWAG 123

Query: 488  NTVNMLRIIPTQAIELGTFECVKRAVTSAKEKCKQNGGSKLQIGHVSLDVSLSWISPXXX 667
            N +NMLRIIPTQAIELGTFECVKRA+TSA+EK  Q+   ++Q+G +SL  SLSWISP   
Sbjct: 124  NGINMLRIIPTQAIELGTFECVKRAMTSAQEKWSQSECPRVQLGPLSLSFSLSWISPVAV 183

Query: 668  XXXXXXXXSTLVCHPLEVLKDRLTISREAYPTISLALKKMYRDGGIGGMYAGLCPTLIGM 847
                    STL CHPLEVLKDRLT+SR+ YPT+S+A+ K+Y+DGGIG  YAG+ PTLIGM
Sbjct: 184  GGAAAGIFSTLACHPLEVLKDRLTVSRDIYPTLSIAISKIYKDGGIGAFYAGISPTLIGM 243

Query: 848  LPYSTCYYFMYETVKNSYCQAKKKKKLNRAEMLVLGALSGLTASTISFPLEVARKRLMVG 1027
            LPYSTCYYFMY+T+K SYC+ K KK LNR EML++GA SG TAST+SFPLEVARKRLMVG
Sbjct: 244  LPYSTCYYFMYDTMKTSYCKGKNKKSLNRPEMLLIGAFSGFTASTLSFPLEVARKRLMVG 303

Query: 1028 ALQGKCPANMAAALSEVIREEGLRGLYRGWGASCLKVMPSSGITWMFYEAWKDILVIEKN 1207
            ALQGKCP +MAAALSEVIRE GL GLYRGWGASCLKVMPSSGITWMFYEAWKDIL++EK 
Sbjct: 304  ALQGKCPPHMAAALSEVIREGGLMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLVEKR 363

Query: 1208 LL 1213
            LL
Sbjct: 364  LL 365



 Score = 25.0 bits (53), Expect(2) = e-132
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
 Frame = +3

Query: 42  KTPSQKKNYCVMGDVYGXXXXXXXXXXXXDTSFNAA-------DLKFQLPNVGKATKEF 197
           +T SQKK   V+GDV G                 +        +L+FQLP++  A ++F
Sbjct: 4   ETESQKKKCGVLGDVLGGVTMVLPKELDEPIPLPSPPTLAVPFELRFQLPDLKLAVRDF 62


>emb|CAN64851.1| hypothetical protein VITISV_024610 [Vitis vinifera]
          Length = 356

 Score =  463 bits (1192), Expect(2) = e-131
 Identities = 228/302 (75%), Positives = 257/302 (85%)
 Frame = +2

Query: 308  RSREVREFFSGALAGAMTKAVLGPLETIRTRMVVGVGPRNIAGSFIEVIEQQGWTGLWAG 487
            R+REV EF SGALAGAMTKAVL PLETIRTRMVVG+G +NI+GSF+EVIEQQGW GLWAG
Sbjct: 55   RTREVGEFISGALAGAMTKAVLAPLETIRTRMVVGIGSKNISGSFLEVIEQQGWQGLWAG 114

Query: 488  NTVNMLRIIPTQAIELGTFECVKRAVTSAKEKCKQNGGSKLQIGHVSLDVSLSWISPXXX 667
            NT+NMLRIIPTQAIEL TFECVKR++T A+EK  +    KLQIG VSL++S+SWISP   
Sbjct: 115  NTINMLRIIPTQAIELATFECVKRSMTEAQEKWSKKECPKLQIGPVSLNLSISWISPIAV 174

Query: 668  XXXXXXXXSTLVCHPLEVLKDRLTISREAYPTISLALKKMYRDGGIGGMYAGLCPTLIGM 847
                    STL CHPLEVLKDRLT+S + YP+IS+AL K++ DGGIG  YAG+ PTLIGM
Sbjct: 175  AGAAAGIVSTLACHPLEVLKDRLTVSPDIYPSISVALSKIHNDGGIGAFYAGISPTLIGM 234

Query: 848  LPYSTCYYFMYETVKNSYCQAKKKKKLNRAEMLVLGALSGLTASTISFPLEVARKRLMVG 1027
            LPYSTCYYFMYET+K SYC AK K  L+R EML++GALSG TASTISFPLEVARKRLMVG
Sbjct: 235  LPYSTCYYFMYETMKKSYCTAKXKTSLSRPEMLLIGALSGFTASTISFPLEVARKRLMVG 294

Query: 1028 ALQGKCPANMAAALSEVIREEGLRGLYRGWGASCLKVMPSSGITWMFYEAWKDILVIEKN 1207
            ALQGKCP +MAAALSEVIRE+G+ GLYRGWGASCLKVMPSSGITWMFYEAWKDIL+ E+ 
Sbjct: 295  ALQGKCPPHMAAALSEVIREQGIMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLAERR 354

Query: 1208 LL 1213
             L
Sbjct: 355  HL 356



 Score = 35.0 bits (79), Expect(2) = e-131
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = +3

Query: 33  MVQKTPSQKKNYCVMGDVYGXXXXXXXXXXXXDTSFNAADLKFQLPNVGKATKEF 197
           M  ++ SQKK+Y V GDVYG            D S +    +FQ P++ +A ++F
Sbjct: 1   MALESESQKKSYGVFGDVYGVMMVPKELEIEKDASID--QFRFQFPDLKQAFQDF 53


>ref|XP_002311894.1| predicted protein [Populus trichocarpa] gi|222851714|gb|EEE89261.1|
            predicted protein [Populus trichocarpa]
          Length = 342

 Score =  474 bits (1219), Expect = e-131
 Identities = 231/302 (76%), Positives = 259/302 (85%)
 Frame = +2

Query: 308  RSREVREFFSGALAGAMTKAVLGPLETIRTRMVVGVGPRNIAGSFIEVIEQQGWTGLWAG 487
            RSRE  EF SGALAGAMTKAVL PLETIRTRMVVGVG +NI+GSF+EVIEQQGW GLWAG
Sbjct: 41   RSREAGEFLSGALAGAMTKAVLAPLETIRTRMVVGVGSKNISGSFLEVIEQQGWQGLWAG 100

Query: 488  NTVNMLRIIPTQAIELGTFECVKRAVTSAKEKCKQNGGSKLQIGHVSLDVSLSWISPXXX 667
            N +NMLRIIPTQAIELGTFECVKRA+TSA+EK  Q+   ++Q+G +SL  SLSWISP   
Sbjct: 101  NGINMLRIIPTQAIELGTFECVKRAMTSAQEKWSQSECPRVQLGPLSLSFSLSWISPVAV 160

Query: 668  XXXXXXXXSTLVCHPLEVLKDRLTISREAYPTISLALKKMYRDGGIGGMYAGLCPTLIGM 847
                    STL CHPLEVLKDRLT+SR+ YPT+S+A+ K+Y+DGGIG  YAG+ PTLIGM
Sbjct: 161  GGAAAGIFSTLACHPLEVLKDRLTVSRDIYPTLSIAISKIYKDGGIGAFYAGISPTLIGM 220

Query: 848  LPYSTCYYFMYETVKNSYCQAKKKKKLNRAEMLVLGALSGLTASTISFPLEVARKRLMVG 1027
            LPYSTCYYFMY+T+K SYC+ K KK LNR EML++GA SG TAST+SFPLEVARKRLMVG
Sbjct: 221  LPYSTCYYFMYDTMKTSYCKGKNKKSLNRPEMLLIGAFSGFTASTLSFPLEVARKRLMVG 280

Query: 1028 ALQGKCPANMAAALSEVIREEGLRGLYRGWGASCLKVMPSSGITWMFYEAWKDILVIEKN 1207
            ALQGKCP +MAAALSEVIRE GL GLYRGWGASCLKVMPSSGITWMFYEAWKDIL++EK 
Sbjct: 281  ALQGKCPPHMAAALSEVIREGGLMGLYRGWGASCLKVMPSSGITWMFYEAWKDILLVEKR 340

Query: 1208 LL 1213
            LL
Sbjct: 341  LL 342


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