BLASTX nr result

ID: Coptis25_contig00019528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019528
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002451598.1| hypothetical protein SORBIDRAFT_04g004420 [S...   254   1e-65
ref|XP_003575356.1| PREDICTED: ubiquitin thioesterase OTU1-like ...   251   9e-65
gb|EAY84610.1| hypothetical protein OsI_05978 [Oryza sativa Indi...   251   9e-65
ref|NP_001145967.1| uncharacterized protein LOC100279494 [Zea ma...   251   1e-64
ref|XP_002894267.1| hypothetical protein ARALYDRAFT_474199 [Arab...   249   5e-64

>ref|XP_002451598.1| hypothetical protein SORBIDRAFT_04g004420 [Sorghum bicolor]
           gi|241931429|gb|EES04574.1| hypothetical protein
           SORBIDRAFT_04g004420 [Sorghum bicolor]
          Length = 208

 Score =  254 bits (648), Expect = 1e-65
 Identities = 122/147 (82%), Positives = 129/147 (87%), Gaps = 3/147 (2%)
 Frame = -3

Query: 672 YCAWILDPEKWGGAIELSILAEYYGREIAAHDIQTSRCDLYGQAMNYPERVMLIYDGLHY 493
           YCAWILDPEKWGGAIELSIL+EYYGREIAA+DIQT+RCDLYGQ  NY ER MLIYDGLHY
Sbjct: 62  YCAWILDPEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKNYSERAMLIYDGLHY 121

Query: 492 DALAMCPFEGSPEEFDQTIFT---GMTIGPIEALALNLVKDAQRKRSYTDTANFTLRCSV 322
           DALAM P EG+PEEFDQTIF      +IGP E LALNLVK+AQRKRSYTDTANFTLRC V
Sbjct: 122 DALAMSPAEGAPEEFDQTIFPVNHNRSIGPAEGLALNLVKEAQRKRSYTDTANFTLRCGV 181

Query: 321 CQIGVSGQKEAIEHAQTTGHANFQEYK 241
           CQIGV GQKEA+EHAQ TGH NFQEYK
Sbjct: 182 CQIGVIGQKEAVEHAQATGHVNFQEYK 208


>ref|XP_003575356.1| PREDICTED: ubiquitin thioesterase OTU1-like isoform 1 [Brachypodium
           distachyon] gi|357150144|ref|XP_003575357.1| PREDICTED:
           ubiquitin thioesterase OTU1-like isoform 2 [Brachypodium
           distachyon]
          Length = 208

 Score =  251 bits (641), Expect = 9e-65
 Identities = 119/147 (80%), Positives = 128/147 (87%), Gaps = 3/147 (2%)
 Frame = -3

Query: 672 YCAWILDPEKWGGAIELSILAEYYGREIAAHDIQTSRCDLYGQAMNYPERVMLIYDGLHY 493
           YCAWILDPEKWGGAIELSIL+EYYGREIAA+DIQT+RCDLYGQ  NY ER MLIYDGLHY
Sbjct: 62  YCAWILDPEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKNYSERAMLIYDGLHY 121

Query: 492 DALAMCPFEGSPEEFDQTIF---TGMTIGPIEALALNLVKDAQRKRSYTDTANFTLRCSV 322
           DALAM P EG+PEEFDQTI+      +IGP+E LALNL K+A RKRSYTDTANFTLRC V
Sbjct: 122 DALAMSPVEGAPEEFDQTIYLVDRNRSIGPVEGLALNLAKEAHRKRSYTDTANFTLRCGV 181

Query: 321 CQIGVSGQKEAIEHAQTTGHANFQEYK 241
           CQIGV GQKEA+EHAQ TGH NFQEYK
Sbjct: 182 CQIGVIGQKEAVEHAQATGHVNFQEYK 208


>gb|EAY84610.1| hypothetical protein OsI_05978 [Oryza sativa Indica Group]
           gi|125580928|gb|EAZ21859.1| hypothetical protein
           OsJ_05505 [Oryza sativa Japonica Group]
          Length = 208

 Score =  251 bits (641), Expect = 9e-65
 Identities = 120/147 (81%), Positives = 128/147 (87%), Gaps = 3/147 (2%)
 Frame = -3

Query: 672 YCAWILDPEKWGGAIELSILAEYYGREIAAHDIQTSRCDLYGQAMNYPERVMLIYDGLHY 493
           YCAWILD EKWGGAIELSIL+EYYGREIAA+DIQT+RCDLYGQ  NY ER MLIYDGLHY
Sbjct: 62  YCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKNYTERTMLIYDGLHY 121

Query: 492 DALAMCPFEGSPEEFDQTIFT---GMTIGPIEALALNLVKDAQRKRSYTDTANFTLRCSV 322
           DALAM PFEG+PEEFDQTIF      +IGP+E LALN VKD +RKRSYTDTANFTLRC V
Sbjct: 122 DALAMSPFEGAPEEFDQTIFPVDHKWSIGPVEGLALNFVKDEKRKRSYTDTANFTLRCGV 181

Query: 321 CQIGVSGQKEAIEHAQTTGHANFQEYK 241
           CQIGV GQKEA+EHAQ TGH NFQEYK
Sbjct: 182 CQIGVIGQKEAVEHAQATGHVNFQEYK 208


>ref|NP_001145967.1| uncharacterized protein LOC100279494 [Zea mays]
           gi|195647914|gb|ACG43425.1| hypothetical protein [Zea
           mays] gi|219885153|gb|ACL52951.1| unknown [Zea mays]
           gi|413926491|gb|AFW66423.1| hypothetical protein
           ZEAMMB73_214721 [Zea mays]
          Length = 208

 Score =  251 bits (640), Expect = 1e-64
 Identities = 120/147 (81%), Positives = 129/147 (87%), Gaps = 3/147 (2%)
 Frame = -3

Query: 672 YCAWILDPEKWGGAIELSILAEYYGREIAAHDIQTSRCDLYGQAMNYPERVMLIYDGLHY 493
           YCAWILDPEKWGGAIELSIL+EYYGREIAA+DIQT+RCDLYGQ  NY ER MLIYDGLHY
Sbjct: 62  YCAWILDPEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKNYSERAMLIYDGLHY 121

Query: 492 DALAMCPFEGSPEEFDQTIFT---GMTIGPIEALALNLVKDAQRKRSYTDTANFTLRCSV 322
           DALAM P EG+PEEFDQTIF      +IGP E LALNLV++AQRKRSYTDTANFTLRC V
Sbjct: 122 DALAMSPAEGAPEEFDQTIFPVNHDRSIGPAEGLALNLVREAQRKRSYTDTANFTLRCGV 181

Query: 321 CQIGVSGQKEAIEHAQTTGHANFQEYK 241
           CQIGV GQ+EA+EHAQ TGH NFQEYK
Sbjct: 182 CQIGVIGQQEAVEHAQATGHVNFQEYK 208


>ref|XP_002894267.1| hypothetical protein ARALYDRAFT_474199 [Arabidopsis lyrata subsp.
           lyrata] gi|297340109|gb|EFH70526.1| hypothetical protein
           ARALYDRAFT_474199 [Arabidopsis lyrata subsp. lyrata]
          Length = 208

 Score =  249 bits (635), Expect = 5e-64
 Identities = 120/148 (81%), Positives = 128/148 (86%), Gaps = 3/148 (2%)
 Frame = -3

Query: 675 EYCAWILDPEKWGGAIELSILAEYYGREIAAHDIQTSRCDLYGQAMNYPERVMLIYDGLH 496
           EYCAWIL+PEKWGGAIELSILA+YYGREIAA+DIQTSRCDLYGQ  NY ERVMLIYDGLH
Sbjct: 61  EYCAWILNPEKWGGAIELSILADYYGREIAAYDIQTSRCDLYGQTKNYNERVMLIYDGLH 120

Query: 495 YDALAMCPFEGSPEEFDQTIF---TGMTIGPIEALALNLVKDAQRKRSYTDTANFTLRCS 325
           YDALA+ PFEG+ E+FD TIF      +IG IE L LNLVKD QRKRSYTDTANFTLRC 
Sbjct: 121 YDALALSPFEGAEEDFDMTIFPVGKDRSIGSIEGLVLNLVKDQQRKRSYTDTANFTLRCG 180

Query: 324 VCQIGVSGQKEAIEHAQTTGHANFQEYK 241
           VCQIGV GQKEA+EHAQ TGH NFQEYK
Sbjct: 181 VCQIGVIGQKEAVEHAQATGHVNFQEYK 208


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