BLASTX nr result
ID: Coptis25_contig00019519
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00019519 (1085 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004159798.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 246 9e-63 ref|XP_003554884.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 244 3e-62 ref|XP_003633851.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 242 1e-61 emb|CAN60906.1| hypothetical protein VITISV_028450 [Vitis vinifera] 242 1e-61 ref|XP_003543849.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 242 1e-61 >ref|XP_004159798.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like [Cucumis sativus] Length = 795 Score = 246 bits (627), Expect = 9e-63 Identities = 145/332 (43%), Positives = 195/332 (58%), Gaps = 5/332 (1%) Frame = +2 Query: 104 MVKGTATSLFRNNSSKENMSRIRMLLKNQSLHILEQRGCLNVPKRSNISHFSTQTSPVSI 283 M +G AT+L R +SS+++ SR R+ N+ LH + Q + + + + FST + V Sbjct: 1 MFRGPATTLLRISSSRKSASRFRIFTGNRLLHSVGQYDDHKILQSNPVRPFSTTVNQVWF 60 Query: 284 NGIC-RNRGRLLSSSFCVLGQRGYSNSSKCLDFGHISTQLCRVSTKLVNLDGVQFRKGFN 460 + R+R + SS + D +S S+ +V + G G N Sbjct: 61 RLLSQRSRFGVFSSFNLRRISIPVGPEADNKDGNGVS------SSNVVEVGGYDADVGKN 114 Query: 461 LVQLNWFSSLIXXXXXXXXXXXXXXXXXXXGSDGDS---SKNVDSFGHVASRDPVGFYRE 631 + N S++ +GDS S + ++ + S DPV Y E Sbjct: 115 VCFEN--DSMMVTGEDGCIGDSIRGSIVDDSKNGDSDLRSSKLRNYETIKSCDPVELYSE 172 Query: 632 LKSIETGVKRTR-KDWDTLVEIFQSFARSGWASDQSLAIYIGALFFPTAVQKFRSFFIKR 808 L+S+E G + DW L EIF F SGWAS+Q+L IYIG FFPTAV KFR+FF+K+ Sbjct: 173 LRSVEMGGSKVELSDWLILQEIFHYFLHSGWASNQALGIYIGMSFFPTAVSKFRNFFLKK 232 Query: 809 CPNDVAKYLVSVGPSEESERILFPIFAEFCLEKFPNEIKLFRDIVHSADLTKPHTWFPFA 988 C DV KYLV +GPS+++ + LFPIF E+CL +FP+EIK F+ +V SADLTKPHTWFPFA Sbjct: 233 CSTDVVKYLVFLGPSDDAVKFLFPIFVEYCLVEFPDEIKRFQSMVKSADLTKPHTWFPFA 292 Query: 989 RAMKRKIVYHCGPTNSGKTHNALQRFMEAKKG 1084 RAMKRKI+YHCGPTNSGKT+NALQRFMEAKKG Sbjct: 293 RAMKRKIIYHCGPTNSGKTYNALQRFMEAKKG 324 >ref|XP_003554884.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like [Glycine max] Length = 829 Score = 244 bits (623), Expect = 3e-62 Identities = 118/180 (65%), Positives = 139/180 (77%), Gaps = 2/180 (1%) Frame = +2 Query: 551 GSDGDSS--KNVDSFGHVASRDPVGFYRELKSIETGVKRTRKDWDTLVEIFQSFARSGWA 724 GSD ++ K + F HVASR PV YRE+ +E G + R + + L+E+ FA+SGWA Sbjct: 146 GSDNNNELGKKNEEFMHVASRGPVELYREMCRVEWGPRLDRTEVEVLLEVCHWFAKSGWA 205 Query: 725 SDQSLAIYIGALFFPTAVQKFRSFFIKRCPNDVAKYLVSVGPSEESERILFPIFAEFCLE 904 S+Q+LAIYIG FFPTA KF F K+CP DVAKYLV +GPS+E+ R LFPIF EFCLE Sbjct: 206 SNQALAIYIGMSFFPTAAHKFHKFLKKKCPTDVAKYLVYLGPSDEAMRFLFPIFVEFCLE 265 Query: 905 KFPNEIKLFRDIVHSADLTKPHTWFPFARAMKRKIVYHCGPTNSGKTHNALQRFMEAKKG 1084 FP+EIK FR +V SADLTKPHTWFPFARAMKRKI+YHCGPTNSGKT+NALQRFMEAK G Sbjct: 266 NFPDEIKRFRSMVESADLTKPHTWFPFARAMKRKIIYHCGPTNSGKTYNALQRFMEAKSG 325 >ref|XP_003633851.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like [Vitis vinifera] Length = 806 Score = 242 bits (618), Expect = 1e-61 Identities = 115/180 (63%), Positives = 138/180 (76%), Gaps = 5/180 (2%) Frame = +2 Query: 560 GDSSKNVDS-----FGHVASRDPVGFYRELKSIETGVKRTRKDWDTLVEIFQSFARSGWA 724 G+SS +V S + HVA RDP YREL +T K T+ DW+ + EI F +SGWA Sbjct: 135 GNSSDDVGSGESVGYEHVAYRDPAELYRELCDSQTSAKPTKSDWEMVSEILHHFRKSGWA 194 Query: 725 SDQSLAIYIGALFFPTAVQKFRSFFIKRCPNDVAKYLVSVGPSEESERILFPIFAEFCLE 904 ++Q+LAIYIG FFPTA KFRSF K+C DVAKYL S+GP + + + LFPIF EFCLE Sbjct: 195 ANQALAIYIGMSFFPTAASKFRSFMSKKCTADVAKYLASLGPGDAAVKFLFPIFVEFCLE 254 Query: 905 KFPNEIKLFRDIVHSADLTKPHTWFPFARAMKRKIVYHCGPTNSGKTHNALQRFMEAKKG 1084 +FP+EIK FR ++ SADLTKPHTWFPFARAMKRKI+YHCGPTNSGKT+NALQR+MEAKKG Sbjct: 255 EFPDEIKRFRSMIKSADLTKPHTWFPFARAMKRKIIYHCGPTNSGKTYNALQRYMEAKKG 314 >emb|CAN60906.1| hypothetical protein VITISV_028450 [Vitis vinifera] Length = 906 Score = 242 bits (618), Expect = 1e-61 Identities = 115/180 (63%), Positives = 138/180 (76%), Gaps = 5/180 (2%) Frame = +2 Query: 560 GDSSKNVDS-----FGHVASRDPVGFYRELKSIETGVKRTRKDWDTLVEIFQSFARSGWA 724 G+SS +V S + HVA RDP YREL +T K T+ DW+ + EI F +SGWA Sbjct: 182 GNSSDDVGSGESVGYEHVAYRDPAELYRELCDSQTSAKPTKSDWEMVSEILHHFRKSGWA 241 Query: 725 SDQSLAIYIGALFFPTAVQKFRSFFIKRCPNDVAKYLVSVGPSEESERILFPIFAEFCLE 904 ++Q+LAIYIG FFPTA KFRSF K+C DVAKYL S+GP + + + LFPIF EFCLE Sbjct: 242 ANQALAIYIGMSFFPTAASKFRSFMSKKCTADVAKYLASLGPGDAAVKFLFPIFVEFCLE 301 Query: 905 KFPNEIKLFRDIVHSADLTKPHTWFPFARAMKRKIVYHCGPTNSGKTHNALQRFMEAKKG 1084 +FP+EIK FR ++ SADLTKPHTWFPFARAMKRKI+YHCGPTNSGKT+NALQR+MEAKKG Sbjct: 302 EFPDEIKRFRSMIKSADLTKPHTWFPFARAMKRKIIYHCGPTNSGKTYNALQRYMEAKKG 361 >ref|XP_003543849.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like [Glycine max] Length = 805 Score = 242 bits (617), Expect = 1e-61 Identities = 118/180 (65%), Positives = 142/180 (78%), Gaps = 2/180 (1%) Frame = +2 Query: 551 GSDGDSS--KNVDSFGHVASRDPVGFYRELKSIETGVKRTRKDWDTLVEIFQSFARSGWA 724 GSD ++ K + F HVASRDPV YRE+ S+E G + + + L+E+ FA+SGWA Sbjct: 141 GSDTNNELGKKSEEFMHVASRDPVELYREMCSVERGPRLDSTEVEVLLEVCHWFAKSGWA 200 Query: 725 SDQSLAIYIGALFFPTAVQKFRSFFIKRCPNDVAKYLVSVGPSEESERILFPIFAEFCLE 904 S+Q+LAIYIG FFPTA KFR+F +K+CP DVAKYLV +GPS+E+ R LFPIF EFCLE Sbjct: 201 SNQALAIYIGLSFFPTAAHKFRNF-LKKCPADVAKYLVYLGPSDEAVRFLFPIFVEFCLE 259 Query: 905 KFPNEIKLFRDIVHSADLTKPHTWFPFARAMKRKIVYHCGPTNSGKTHNALQRFMEAKKG 1084 FP+EIK FR +V +ADLTKPHTWFPFAR MKRKI+YHCGPTNSGKT+NALQRFMEAK G Sbjct: 260 NFPDEIKRFRGMVEAADLTKPHTWFPFARVMKRKIIYHCGPTNSGKTYNALQRFMEAKTG 319