BLASTX nr result

ID: Coptis25_contig00019517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019517
         (1369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278599.2| PREDICTED: uncharacterized protein LOC100260...   350   6e-94
ref|XP_002313979.1| predicted protein [Populus trichocarpa] gi|2...   332   1e-88
ref|XP_002516645.1| protein binding protein, putative [Ricinus c...   328   3e-87
emb|CBI15919.3| unnamed protein product [Vitis vinifera]              325   2e-86
ref|XP_002298491.1| predicted protein [Populus trichocarpa] gi|2...   318   2e-84

>ref|XP_002278599.2| PREDICTED: uncharacterized protein LOC100260376 [Vitis vinifera]
          Length = 264

 Score =  350 bits (897), Expect = 6e-94
 Identities = 185/266 (69%), Positives = 214/266 (80%), Gaps = 8/266 (3%)
 Frame = -1

Query: 1033 MKKHNFKRVVVSENKKNEEIGWELRPGGMLVQKRIDGVGASGPMIKIKVSHGSYQHEINV 854
            M+K + K VV   N   EEI WELRPGGMLVQKR  G  AS PMIKIKVSHGSY H I +
Sbjct: 1    MRKSSCKGVV--GNVCKEEIDWELRPGGMLVQKRNAGDAASSPMIKIKVSHGSYHHYITI 58

Query: 853  PAQSTFGDLKRLLAHETGLKPKEQRLLFRGKEKEDTDCLHMAGVLDMSKVVLLEDPASRE 674
            PAQSTFGDLKR+LAHETGL+PKEQRLLFRGKEKE+ +CLHM GV +MSKV+LLEDPAS+E
Sbjct: 59   PAQSTFGDLKRVLAHETGLEPKEQRLLFRGKEKENDECLHMVGVKEMSKVILLEDPASKE 118

Query: 673  KKLQERKNDSGVSKSCEAIAKVRVEVS-------ALESIMRNGTKIAEKEFNILTELFMM 515
            KKL+E K D G+ K+ EA+A VRVEV        ALE  +R G K+ +KEF +LTEL M+
Sbjct: 119  KKLEEMKKDQGILKAYEAVALVRVEVDKLSEKIVALERAVRGGNKVVDKEFVVLTELLMV 178

Query: 514  QLLKLDGIAAEGEAKDQRRIEVRRVQSFVETLDILKSRNSNPFSNGSNAVSVTTKWQKFE 335
            QLL+LD I A+GEAK QRRIEV R+QSFV+TLD LK+RNSNPF+N +NAVSVTTKW  FE
Sbjct: 179  QLLQLDTIEADGEAKVQRRIEVCRIQSFVDTLDNLKARNSNPFNNSTNAVSVTTKWVAFE 238

Query: 334  SGVGSLSAPT-TKSSTKITKDWELFD 260
            SG+GSLSAPT  +SSTKIT+DWELFD
Sbjct: 239  SGIGSLSAPTPLQSSTKITQDWELFD 264


>ref|XP_002313979.1| predicted protein [Populus trichocarpa] gi|222850387|gb|EEE87934.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score =  332 bits (852), Expect = 1e-88
 Identities = 171/248 (68%), Positives = 205/248 (82%), Gaps = 8/248 (3%)
 Frame = -1

Query: 979 EIGWELRPGGMLVQKRIDGVGASGPMIKIKVSHGSYQHEINVPAQSTFGDLKRLLAHETG 800
           EI WELRPGGMLVQKR  GVG+SGPMIKIKVSHGS  ++ +VPAQSTFGDLK++LA+ETG
Sbjct: 18  EIDWELRPGGMLVQKRDVGVGSSGPMIKIKVSHGSCHYDTDVPAQSTFGDLKKVLANETG 77

Query: 799 LKPKEQRLLFRGKEKEDTDCLHMAGVLDMSKVVLLEDPASREKKLQERKNDSGVSKSCEA 620
           L+P+EQRLLFRGKE+E+ + LHM GV DMSKV+L EDPAS+E+KL+E K + G  ++CEA
Sbjct: 78  LEPQEQRLLFRGKERENDEYLHMVGVKDMSKVILFEDPASKERKLEEMKRNQGTFEACEA 137

Query: 619 IAKVRVEVS-------ALESIMRNGTKIAEKEFNILTELFMMQLLKLDGIAAEGEAKDQR 461
           +A+VR EV        ALE+   +GT IA+KEF +LTEL M+QLLKLD I A GEAK QR
Sbjct: 138 VARVRAEVDKLCEKVVALETTFCSGTAIADKEFVVLTELLMIQLLKLDSIEANGEAKVQR 197

Query: 460 RIEVRRVQSFVETLDILKSRNSNPFSNGSNAVSVTTKWQKFESGVGSLSAPT-TKSSTKI 284
           RIEVRR+QSFV+TLD LK RNSNPFSN S+AVSVTTKW+ F SGVGSLSAP   +S+TK+
Sbjct: 198 RIEVRRIQSFVDTLDNLKVRNSNPFSNSSSAVSVTTKWETFASGVGSLSAPVPIQSATKV 257

Query: 283 TKDWELFD 260
           T+DWELFD
Sbjct: 258 TQDWELFD 265


>ref|XP_002516645.1| protein binding protein, putative [Ricinus communis]
           gi|223544217|gb|EEF45740.1| protein binding protein,
           putative [Ricinus communis]
          Length = 265

 Score =  328 bits (840), Expect = 3e-87
 Identities = 165/248 (66%), Positives = 201/248 (81%), Gaps = 8/248 (3%)
 Frame = -1

Query: 979 EIGWELRPGGMLVQKRIDGVGASGPMIKIKVSHGSYQHEINVPAQSTFGDLKRLLAHETG 800
           +I WELRPGGMLVQKR  G G+SGPMIKIKVSHGSY +E+ VPAQSTFGDLK++L HE G
Sbjct: 18  QIDWELRPGGMLVQKREVGDGSSGPMIKIKVSHGSYHYEVTVPAQSTFGDLKKVLVHEAG 77

Query: 799 LKPKEQRLLFRGKEKEDTDCLHMAGVLDMSKVVLLEDPASREKKLQERKNDSGVSKSCEA 620
           L+ +EQRLLFRGKEKED +CLHM GV D+SKV+LLEDPA +E+KL+E K +  + K+CEA
Sbjct: 78  LEAEEQRLLFRGKEKEDNECLHMEGVKDLSKVILLEDPACKERKLEEMKKNEAILKACEA 137

Query: 619 IAKVRVEVS-------ALESIMRNGTKIAEKEFNILTELFMMQLLKLDGIAAEGEAKDQR 461
           +A+VR EV         LE+ + +GT +AEKEF +LTEL M+QLLKLD I A+GEAK QR
Sbjct: 138 VARVRAEVDKLSQKVVTLETTVSSGTLVAEKEFIVLTELLMVQLLKLDMIEADGEAKVQR 197

Query: 460 RIEVRRVQSFVETLDILKSRNSNPFSNGSNAVSVTTKWQKFESGVGSLSAPTT-KSSTKI 284
           RIEVRRVQSFV+ LD LK+RNSN  SN SN VSVT KW+ F+SGVGS+S P + +S+TK+
Sbjct: 198 RIEVRRVQSFVDALDKLKARNSNTLSNSSNEVSVTAKWETFDSGVGSVSTPVSIQSATKV 257

Query: 283 TKDWELFD 260
           T+DWELFD
Sbjct: 258 TQDWELFD 265


>emb|CBI15919.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  325 bits (833), Expect = 2e-86
 Identities = 169/238 (71%), Positives = 196/238 (82%), Gaps = 8/238 (3%)
 Frame = -1

Query: 949 MLVQKRIDGVGASGPMIKIKVSHGSYQHEINVPAQSTFGDLKRLLAHETGLKPKEQRLLF 770
           MLVQKR  G  AS PMIKIKVSHGSY H I +PAQSTFGDLKR+LAHETGL+PKEQRLLF
Sbjct: 1   MLVQKRNAGDAASSPMIKIKVSHGSYHHYITIPAQSTFGDLKRVLAHETGLEPKEQRLLF 60

Query: 769 RGKEKEDTDCLHMAGVLDMSKVVLLEDPASREKKLQERKNDSGVSKSCEAIAKVRVEVS- 593
           RGKEKE+ +CLHM GV +MSKV+LLEDPAS+EKKL+E K D G+ K+ EA+A VRVEV  
Sbjct: 61  RGKEKENDECLHMVGVKEMSKVILLEDPASKEKKLEEMKKDQGILKAYEAVALVRVEVDK 120

Query: 592 ------ALESIMRNGTKIAEKEFNILTELFMMQLLKLDGIAAEGEAKDQRRIEVRRVQSF 431
                 ALE  +R G K+ +KEF +LTEL M+QLL+LD I A+GEAK QRRIEV R+QSF
Sbjct: 121 LSEKIVALERAVRGGNKVVDKEFVVLTELLMVQLLQLDTIEADGEAKVQRRIEVCRIQSF 180

Query: 430 VETLDILKSRNSNPFSNGSNAVSVTTKWQKFESGVGSLSAPT-TKSSTKITKDWELFD 260
           V+TLD LK+RNSNPF+N +NAVSVTTKW  FESG+GSLSAPT  +SSTKIT+DWELFD
Sbjct: 181 VDTLDNLKARNSNPFNNSTNAVSVTTKWVAFESGIGSLSAPTPLQSSTKITQDWELFD 238


>ref|XP_002298491.1| predicted protein [Populus trichocarpa] gi|222845749|gb|EEE83296.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  318 bits (815), Expect = 2e-84
 Identities = 166/248 (66%), Positives = 201/248 (81%), Gaps = 8/248 (3%)
 Frame = -1

Query: 979 EIGWELRPGGMLVQKRIDGVGASGPMIKIKVSHGSYQHEINVPAQSTFGDLKRLLAHETG 800
           EI WELRPGGMLVQK   G G+SGPMIKIKVSHG   ++I VPAQSTFGDLK++LAHETG
Sbjct: 16  EIHWELRPGGMLVQKMDVGDGSSGPMIKIKVSHGLCHYDIAVPAQSTFGDLKKVLAHETG 75

Query: 799 LKPKEQRLLFRGKEKEDTDCLHMAGVLDMSKVVLLEDPASREKKLQERKNDSGVSKSCEA 620
           L+ KEQRLLF+GKEKE+ + LHM GV DMSKV+L EDPAS+E+KL+E K +    K+ EA
Sbjct: 76  LESKEQRLLFKGKEKENDEYLHMVGVKDMSKVILFEDPASKERKLEEMKRNQDTLKAYEA 135

Query: 619 IAKVRVEVS-------ALESIMRNGTKIAEKEFNILTELFMMQLLKLDGIAAEGEAKDQR 461
           +A+VR EV        ALE+ +R+GTKIAEKEF++LTEL M+QLLKLD I A+G+AK QR
Sbjct: 136 VARVRAEVDKLCEKVVALETNIRSGTKIAEKEFSVLTELLMIQLLKLDSIEADGQAKVQR 195

Query: 460 RIEVRRVQSFVETLDILKSRNSNPFSNGSNAVSVTTKWQKFESGVGSLSAPT-TKSSTKI 284
           +IEVRR+QSFV+TL+ LK RNS  FS+ SNAVSVTTKW+ F SGVGSLSAP   +S+TK+
Sbjct: 196 KIEVRRIQSFVDTLENLKVRNSKSFSHNSNAVSVTTKWETFASGVGSLSAPVPLQSATKL 255

Query: 283 TKDWELFD 260
            +DWELFD
Sbjct: 256 NQDWELFD 263


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