BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019511
         (2010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266408.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   662   0.0  
ref|XP_002312702.1| predicted protein [Populus trichocarpa] gi|2...   618   e-174
ref|XP_003553228.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   610   e-172
ref|XP_003530661.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   595   e-167
sp|Q6H601.2|RH22_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA ...   594   e-167

>ref|XP_002266408.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 22 [Vitis vinifera]
            gi|296086509|emb|CBI32098.3| unnamed protein product
            [Vitis vinifera]
          Length = 593

 Score =  662 bits (1708), Expect = 0.0
 Identities = 339/529 (64%), Positives = 409/529 (77%), Gaps = 1/529 (0%)
 Frame = +2

Query: 248  DNGESFYADESVTWNSIGVSEKLSRSLSNIGLHKPSLIQATCIPSILSEKDVVVAAETGS 427
            +  E+F+AD+ V+W S+GVS++L+R+LS IG+ +PSL+QA CIP ILS  DVVVAAETGS
Sbjct: 73   NGAETFFADQGVSWASLGVSDRLTRALSTIGIERPSLVQAACIPYILSGNDVVVAAETGS 132

Query: 428  GKTHGYLVPLFDKMLNFRGHSAGTDDGREHSQPLHFSLVLCPNVMLCEQVVRMANCINND 607
            GKTHGYLVPL DK+      S      +E        LVLCPNVMLCEQVV+MANC+  D
Sbjct: 133  GKTHGYLVPLIDKLCGTPNDSVDASTDQESRHLHQLCLVLCPNVMLCEQVVQMANCLCGD 192

Query: 608  SGQPLLQVSAVCGRQGWPVSQPDILVSTPAALLNYLYALDPERRRRSDFLRGLKYVVFDE 787
            +G+PLL+V AVCGRQGWPV +PDI+VSTPAA LN L A+DPE++RRS+FLRG+K VVFDE
Sbjct: 193  NGEPLLRVVAVCGRQGWPVKEPDIIVSTPAAFLNNLNAIDPEKQRRSNFLRGVKCVVFDE 252

Query: 788  ADMLLCGSFQNQVIRLINMFRFEEKVLSRLKNSVVKSSIESNAPTLEQLEAEFD-DELQS 964
            ADMLLCGSFQNQVIRLI+M RF+EK+LSR+K SV    +E  + ++    +E + DE ++
Sbjct: 253  ADMLLCGSFQNQVIRLIDMLRFDEKILSRIKKSVPDKQMELESDSMLHFYSESEKDEEET 312

Query: 965  DLPXXXXXXXXXXXXXXXXVEGVVRLEDPKGNEPKPNRHKDWIRARKIYERSKQYIFVAA 1144
            +                  VEG    E   G+  K    KDW R RK YERSKQYIFVAA
Sbjct: 313  EEQTEIISDEEENVVGEPVVEGFTE-EIEVGSIKK----KDWRRVRKNYERSKQYIFVAA 367

Query: 1145 TLPLNGKKTAGGVLKRMFPDANWASGSYLHCHNPRLEQRWIEVTIDTQVDVLIDAVEQGL 1324
            TLP+NGKKTAGGVLKRMFPDA+W SG YLHCHNPRLEQ+WIEVT+DTQVD LIDAV+QG 
Sbjct: 368  TLPVNGKKTAGGVLKRMFPDAHWVSGGYLHCHNPRLEQKWIEVTVDTQVDALIDAVKQGF 427

Query: 1325 RSKELNPEIGVCRTLVFANTVDAVEAVAKILRNVGVECSCYHSDSSLEERSKNLVDFRER 1504
            RSK L+  +GV RT+VFANTV+AVEA++KIL   GVEC  YH DSSLEER+K LVDF+++
Sbjct: 428  RSKVLDSGVGVSRTMVFANTVEAVEAISKILHRAGVECFRYHRDSSLEERAKTLVDFQQK 487

Query: 1505 GGVLVCTDAAARGLDVLNVQHVIQAEFASSAVDFIHRIGRTARAGQSGLVTSLYTKSNRD 1684
            GGVLVCTD+AARGLD+ N+ HVIQA+FA+SA+DF+HR+GRTARAGQ GLVTSLYT+SNRD
Sbjct: 488  GGVLVCTDSAARGLDIPNISHVIQADFATSALDFLHRVGRTARAGQFGLVTSLYTESNRD 547

Query: 1685 LVAAVHQAGNLGQPVEKAFSRKRGFRNKLKKRGSKGVTVEATAEDRVLA 1831
            LVAA+ QA  LGQPV+ AFSRKR FRNKLKKRG+  +      E+RVLA
Sbjct: 548  LVAAIRQADKLGQPVDAAFSRKRSFRNKLKKRGTNKL---GDVEERVLA 593


>ref|XP_002312702.1| predicted protein [Populus trichocarpa] gi|222852522|gb|EEE90069.1|
            predicted protein [Populus trichocarpa]
          Length = 585

 Score =  618 bits (1593), Expect = e-174
 Identities = 331/548 (60%), Positives = 396/548 (72%), Gaps = 2/548 (0%)
 Frame = +2

Query: 146  LFYLKPYKPSRSIRRNYAANVLSVKEITXXXXXXDNGESFYADESVTWNSIGVSEKLSRS 325
            LF+L P    R+IR    A V   K            E+F++D +V+W S+G+S  LSR+
Sbjct: 40   LFFLNP----RAIRGFATAVVAETKAAETK-----TAETFFSDHAVSWASLGLSHPLSRA 90

Query: 326  LSNIGLHKPSLIQATCIPSILSEKDVVVAAETGSGKTHGYLVPLFDKMLNFRGHSAGTDD 505
            LSN G  +PSL+QA  IPSILS KDVV+AAETGSGKTH YLVPL +  L+      G   
Sbjct: 91   LSNTGFSRPSLVQAAAIPSILSGKDVVIAAETGSGKTHSYLVPLINNRLSASASQQGLTP 150

Query: 506  GREHSQPLHFSLVLCPNVMLCEQVVRMANCINNDSGQPLLQVSAVCGRQGWPVSQPDILV 685
                  P   SLVLCPNV+LC+QVVRMA+ + +D G PLL+V+AVCGRQGWPV+QPDI+V
Sbjct: 151  -----TPSGLSLVLCPNVLLCDQVVRMASGLCDDDGHPLLKVAAVCGRQGWPVNQPDIIV 205

Query: 686  STPAALLNYLYALDPERRRRSDFLRGLKYVVFDEADMLLCGSFQNQVIRLINMFRFEEKV 865
            STPAALLN +   DP+++ RS F+RG+KYVVFDEADMLLCG FQNQVIRLINM RF+EK 
Sbjct: 206  STPAALLNNI---DPKKQSRSSFIRGVKYVVFDEADMLLCGGFQNQVIRLINMLRFDEKQ 262

Query: 866  LSRLKNSVVKSSIESNAPTLEQLEAE-FDDELQSDLPXXXXXXXXXXXXXXXXVEGVVRL 1042
            LSR   S V+      + +LE+  +E  +D+ +S L                       +
Sbjct: 263  LSRANKSAVEVPQGIGSDSLERFSSEDVEDQQESVLEEDEEDQQESVLEEDEDFVAEFEV 322

Query: 1043 EDPKGN-EPKPNRHKDWIRARKIYERSKQYIFVAATLPLNGKKTAGGVLKRMFPDANWAS 1219
            ED K   E      KDW R RK YERSKQYIFVAATLP+NGKKTAG +LKRMFPDANW S
Sbjct: 323  EDIKEEIEAGSIDRKDWRRVRKNYERSKQYIFVAATLPVNGKKTAGAMLKRMFPDANWIS 382

Query: 1220 GSYLHCHNPRLEQRWIEVTIDTQVDVLIDAVEQGLRSKELNPEIGVCRTLVFANTVDAVE 1399
            G+YLHCHNPRLE++W+EVT+DTQ+  LI+AV+QG RS  L+   GV RT+VFANTV+AVE
Sbjct: 383  GTYLHCHNPRLERKWVEVTVDTQLHALIEAVKQGFRSDMLDYGAGVSRTMVFANTVEAVE 442

Query: 1400 AVAKILRNVGVECSCYHSDSSLEERSKNLVDFRERGGVLVCTDAAARGLDVLNVQHVIQA 1579
            AVAKIL   G+EC  YH DSSLEER+K LVDFRE+GGV VCTDAAARG+D+ +V HVIQA
Sbjct: 443  AVAKILGKAGIECFRYHKDSSLEERAKTLVDFREKGGVFVCTDAAARGVDIPDVSHVIQA 502

Query: 1580 EFASSAVDFIHRIGRTARAGQSGLVTSLYTKSNRDLVAAVHQAGNLGQPVEKAFSRKRGF 1759
            +FA+SAVDF+HR+GRTARAG  GLVTSLYT+SNRDLV A+ QA  LGQPVE AFSRKR F
Sbjct: 503  DFATSAVDFLHRVGRTARAGHHGLVTSLYTESNRDLVDAIRQAEKLGQPVETAFSRKRSF 562

Query: 1760 RNKLKKRG 1783
            RNKLKKRG
Sbjct: 563  RNKLKKRG 570


>ref|XP_003553228.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 22-like [Glycine max]
          Length = 579

 Score =  610 bits (1574), Expect = e-172
 Identities = 312/561 (55%), Positives = 413/561 (73%)
 Frame = +2

Query: 146  LFYLKPYKPSRSIRRNYAANVLSVKEITXXXXXXDNGESFYADESVTWNSIGVSEKLSRS 325
            LF  +P+ P+   +      V +V   +      +  ++F+A+E+V+W+S+G+S+ +SR+
Sbjct: 34   LFKPRPFSPTTPRQAQTRTFVSAVASSSSAAHGSNGRDTFFAEENVSWSSLGLSDTISRA 93

Query: 326  LSNIGLHKPSLIQATCIPSILSEKDVVVAAETGSGKTHGYLVPLFDKMLNFRGHSAGTDD 505
            LSNIGL++PSL+QA+ +PS+L  KDV++AAETGSGKT+ YLVPL DK+ + + HS     
Sbjct: 94   LSNIGLNRPSLVQASSVPSVLLGKDVIIAAETGSGKTYSYLVPLIDKLRDAQEHSLHAVL 153

Query: 506  GREHSQPLHFSLVLCPNVMLCEQVVRMANCINNDSGQPLLQVSAVCGRQGWPVSQPDILV 685
             ++ + P +  LVLCPNV LCEQVVRMAN +  D G+ ++ V+A+CG+QGWP+ +PD++V
Sbjct: 154  DQKVTSPQNVLLVLCPNVQLCEQVVRMANSLCRDDGETIVSVAAICGKQGWPIREPDVIV 213

Query: 686  STPAALLNYLYALDPERRRRSDFLRGLKYVVFDEADMLLCGSFQNQVIRLINMFRFEEKV 865
            +TPAALLNY+   D +R RR +F+RG+KYVVFDEAD+LLCGSFQN+VIRLIN+ RF+EK+
Sbjct: 214  TTPAALLNYV---DLDRTRRMEFMRGVKYVVFDEADLLLCGSFQNKVIRLINLLRFDEKL 270

Query: 866  LSRLKNSVVKSSIESNAPTLEQLEAEFDDELQSDLPXXXXXXXXXXXXXXXXVEGVVRLE 1045
            LSR K SV +  ++       +   E ++ELQ++                   E +V + 
Sbjct: 271  LSRSKKSVAEFPMKQEFSLSSEDAFEGEEELQTEA---------ISEDDDNDKEDIVDIN 321

Query: 1046 DPKGNEPKPNRHKDWIRARKIYERSKQYIFVAATLPLNGKKTAGGVLKRMFPDANWASGS 1225
            +  GN     + +DW R RK YERSKQY+FVAATLP+NGKKTAGGVLK MFPDA W  G+
Sbjct: 322  NEAGNV----KLRDWRRVRKNYERSKQYVFVAATLPVNGKKTAGGVLKYMFPDAEWVCGN 377

Query: 1226 YLHCHNPRLEQRWIEVTIDTQVDVLIDAVEQGLRSKELNPEIGVCRTLVFANTVDAVEAV 1405
            YLHCHNPRLEQ+WIEV +DTQVD LI AV    RS++L    G+ RT+VFANTV+AVEAV
Sbjct: 378  YLHCHNPRLEQKWIEVMVDTQVDELIKAVNHRFRSEDLVNAGGIHRTMVFANTVEAVEAV 437

Query: 1406 AKILRNVGVECSCYHSDSSLEERSKNLVDFRERGGVLVCTDAAARGLDVLNVQHVIQAEF 1585
            AKIL   G+ECS YH + +LEER++ LVDF+++GGVLVCTDAAARG+D+ NV HVIQA+F
Sbjct: 438  AKILLRSGIECSRYHKNCTLEERAQTLVDFQDKGGVLVCTDAAARGVDIPNVLHVIQADF 497

Query: 1586 ASSAVDFIHRIGRTARAGQSGLVTSLYTKSNRDLVAAVHQAGNLGQPVEKAFSRKRGFRN 1765
            A+SAVDF+HR+GRTARAGQ GLVTS+ T+SNR+LV AV +AG L QPVE AFSRKR FRN
Sbjct: 498  ATSAVDFLHRVGRTARAGQIGLVTSMCTESNRELVNAVRRAGELDQPVETAFSRKRSFRN 557

Query: 1766 KLKKRGSKGVTVEATAEDRVL 1828
            KLKKRG+  V   AT ++ VL
Sbjct: 558  KLKKRGTNKVRDSATIKESVL 578


>ref|XP_003530661.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 22-like [Glycine max]
          Length = 577

 Score =  595 bits (1535), Expect = e-167
 Identities = 302/524 (57%), Positives = 394/524 (75%)
 Frame = +2

Query: 257  ESFYADESVTWNSIGVSEKLSRSLSNIGLHKPSLIQATCIPSILSEKDVVVAAETGSGKT 436
            ++F+A+E+V+W+S+G+S+ +SR+LSNIGL++PSL+QA+ +PS+LS KDV++AAETGSGKT
Sbjct: 69   DTFFAEENVSWSSLGLSDTISRALSNIGLNRPSLVQASSVPSVLSGKDVIIAAETGSGKT 128

Query: 437  HGYLVPLFDKMLNFRGHSAGTDDGREHSQPLHFSLVLCPNVMLCEQVVRMANCINNDSGQ 616
            + YLVPL DK+   +  S      RE +      LVLCPNV LCEQVVRMAN +  D  +
Sbjct: 129  YSYLVPLIDKLRVTQERSLLAVSDREVTSLHKVLLVLCPNVQLCEQVVRMANSLCKDDSE 188

Query: 617  PLLQVSAVCGRQGWPVSQPDILVSTPAALLNYLYALDPERRRRSDFLRGLKYVVFDEADM 796
             ++  +A+CG+QGWP+ +PD++V+TPAALLNY+   D +R RR +F+RG+KYVVFDEAD+
Sbjct: 189  TIVSAAAICGKQGWPIREPDVIVTTPAALLNYV---DLDRTRRVEFMRGVKYVVFDEADL 245

Query: 797  LLCGSFQNQVIRLINMFRFEEKVLSRLKNSVVKSSIESNAPTLEQLEAEFDDELQSDLPX 976
            LLCGSFQN+VIRLIN+ RF+EK+LSR K SV +  ++  +    +   E +++L+++   
Sbjct: 246  LLCGSFQNKVIRLINLLRFDEKLLSRSKKSVAEFPMKQESSLSSEDAFEGEEKLETEA-- 303

Query: 977  XXXXXXXXXXXXXXXVEGVVRLEDPKGNEPKPNRHKDWIRARKIYERSKQYIFVAATLPL 1156
                            E +  +     NE +  + +DW R RK YERSKQY+FVAATLP+
Sbjct: 304  -------ILEEDNNDKEDIADIN----NEAENVKLRDWRRVRKNYERSKQYVFVAATLPV 352

Query: 1157 NGKKTAGGVLKRMFPDANWASGSYLHCHNPRLEQRWIEVTIDTQVDVLIDAVEQGLRSKE 1336
            NGKKTAGGVLK MFPDA W  G YLHCHNPRLEQ+WIEVT+DTQVD LI AV    RS++
Sbjct: 353  NGKKTAGGVLKYMFPDAEWVCGDYLHCHNPRLEQKWIEVTVDTQVDELIKAVNHRFRSED 412

Query: 1337 LNPEIGVCRTLVFANTVDAVEAVAKILRNVGVECSCYHSDSSLEERSKNLVDFRERGGVL 1516
            L    G+ RT+VFANTV+AVEAVAKIL + G+ECS YH + +LEER++ LVDF ++GGVL
Sbjct: 413  LVNAGGIHRTMVFANTVEAVEAVAKILLHSGIECSRYHKNCTLEERAQTLVDFHDKGGVL 472

Query: 1517 VCTDAAARGLDVLNVQHVIQAEFASSAVDFIHRIGRTARAGQSGLVTSLYTKSNRDLVAA 1696
            VCTDAAARG+D+ NV HVIQ +FA+SAVDF+HR+GRTARAGQ GLVTS+YT+SNR+LV A
Sbjct: 473  VCTDAAARGVDIPNVLHVIQVDFATSAVDFLHRVGRTARAGQFGLVTSMYTESNRELVNA 532

Query: 1697 VHQAGNLGQPVEKAFSRKRGFRNKLKKRGSKGVTVEATAEDRVL 1828
            V +AG L QPVE AFSRKR FRNKLKKRG+  V   A  ++ VL
Sbjct: 533  VRRAGELDQPVETAFSRKRSFRNKLKKRGANKVRDSAPIKESVL 576


>sp|Q6H601.2|RH22_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 22
          Length = 577

 Score =  594 bits (1531), Expect = e-167
 Identities = 311/544 (57%), Positives = 391/544 (71%), Gaps = 4/544 (0%)
 Frame = +2

Query: 161  PYKPSRSIRRNYAANVLSVKEITXXXXXXDNGESFYADESVTWNSIGVSEKLSRSLSNIG 340
            P  P R + R  A    + +          +G+ F+++ES +W S+GVS++L+ +L   G
Sbjct: 42   PAPPWRLLSRPRALATAAAEADDAGAGGNGDGDGFFSEESTSWESLGVSDRLASALHGAG 101

Query: 341  LHKPSLIQATCIPSILSEKDVVVAAETGSGKTHGYLVPLFDKMLNFRGHSAGTDDGREH- 517
            L +PSL+QA CIP +L+  DV+VAAETGSGKTHGYLVPL +K+ +    S   +DG    
Sbjct: 102  LARPSLVQAACIPHVLTTNDVIVAAETGSGKTHGYLVPLIEKLCS---KSISAEDGNSQD 158

Query: 518  --SQPLHFSLVLCPNVMLCEQVVRMANCINNDSGQPLLQVSAVCGRQGWPVSQPDILVST 691
              S   + +LVLCPNVMLCEQVVRMAN + ++SG+PL   +AVCG +GWP  +PDILV+T
Sbjct: 159  VTSGSPNIALVLCPNVMLCEQVVRMANSLVDESGEPLKSAAAVCGPKGWPTVRPDILVAT 218

Query: 692  PAALLNYLYALDPERRRRSDFLRGLKYVVFDEADMLLCGSFQNQVIRLINMFRFEEKVLS 871
            PAALLNYL+  DPE+RRR  FLR +K++VFDEADMLLCGSF+NQVIRLI+M RF+EK+LS
Sbjct: 219  PAALLNYLFDYDPEKRRRERFLRNVKFIVFDEADMLLCGSFENQVIRLIHMLRFDEKLLS 278

Query: 872  RLKNSVVKSSIESNAPTLEQLEAEFDDELQSDLPXXXXXXXXXXXXXXXXVEGVVRLEDP 1051
            R+++S  + S+       E  +++   EL +D                   +G+V+    
Sbjct: 279  RMEDSGKEISLGDTNEYREDSDSQ-SAELSAD--------------DEENEDGLVQHRPV 323

Query: 1052 KGNEPKPNRHK-DWIRARKIYERSKQYIFVAATLPLNGKKTAGGVLKRMFPDANWASGSY 1228
                     HK DW R RK+Y RSKQY+FVAATLP +GKKTAGGVLKRMFP+A W SG+Y
Sbjct: 324  NVENAHIGAHKKDWRRVRKVYRRSKQYVFVAATLPQSGKKTAGGVLKRMFPNAVWVSGAY 383

Query: 1229 LHCHNPRLEQRWIEVTIDTQVDVLIDAVEQGLRSKELNPEIGVCRTLVFANTVDAVEAVA 1408
            LH HNPRLE+RWIEVT DTQV  L+DAV+ GL+++  + ++G  RT+VF NTVDA  +V+
Sbjct: 384  LHRHNPRLERRWIEVTADTQVSALLDAVKYGLKNEVHDTKLGPNRTMVFTNTVDAANSVS 443

Query: 1409 KILRNVGVECSCYHSDSSLEERSKNLVDFRERGGVLVCTDAAARGLDVLNVQHVIQAEFA 1588
             IL+ VGV C  YH DSSLEER+KNL  FRE GGVLVCTDAAARGLDV NV HVIQAEFA
Sbjct: 444  DILQRVGVPCILYHRDSSLEERAKNLQSFRENGGVLVCTDAAARGLDVPNVSHVIQAEFA 503

Query: 1589 SSAVDFIHRIGRTARAGQSGLVTSLYTKSNRDLVAAVHQAGNLGQPVEKAFSRKRGFRNK 1768
            + AVDF+HR+GRTARAGQSG+VTSLYT++NRDLV AV QA  L QPVEKAFSRKR FRNK
Sbjct: 504  ACAVDFLHRVGRTARAGQSGIVTSLYTEANRDLVRAVRQAEELAQPVEKAFSRKRSFRNK 563

Query: 1769 LKKR 1780
            LKK+
Sbjct: 564  LKKQ 567