BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019478
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containi...   122   3e-26
emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]   122   3e-26
ref|XP_002533731.1| pentatricopeptide repeat-containing protein,...   121   7e-26
ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containi...   113   2e-23
ref|XP_002329666.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21

>ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
           [Vitis vinifera] gi|297735424|emb|CBI17864.3| unnamed
           protein product [Vitis vinifera]
          Length = 821

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/70 (80%), Positives = 65/70 (92%)
 Frame = -1

Query: 210 ELGKKGYKPDLVLCNSMLSIFAKNRMYNQAHEMVQVIRESGLEPDLITYNSLMDMYARGG 31
           E  K GYKPDLVL NSMLSIFAKN+MY++AHEM+++IRESGL+PDL+TYNSLMDMYARGG
Sbjct: 620 EFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGG 679

Query: 30  DCWKAEEILK 1
           +CWK EEILK
Sbjct: 680 ECWKGEEILK 689


>emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
          Length = 821

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/70 (80%), Positives = 65/70 (92%)
 Frame = -1

Query: 210 ELGKKGYKPDLVLCNSMLSIFAKNRMYNQAHEMVQVIRESGLEPDLITYNSLMDMYARGG 31
           E  K GYKPDLVL NSMLSIFAKN+MY++AHEM+++IRESGL+PDL+TYNSLMDMYARGG
Sbjct: 620 EFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGG 679

Query: 30  DCWKAEEILK 1
           +CWK EEILK
Sbjct: 680 ECWKGEEILK 689


>ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526356|gb|EEF28650.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 835

 Score =  121 bits (303), Expect = 7e-26
 Identities = 53/69 (76%), Positives = 65/69 (94%)
 Frame = -1

Query: 207 LGKKGYKPDLVLCNSMLSIFAKNRMYNQAHEMVQVIRESGLEPDLITYNSLMDMYARGGD 28
           L K GYKPDLVLCNSMLSIFAKN MY++AHEM+++I ++GL+PDL+T+NSLMDMYARGGD
Sbjct: 634 LQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGD 693

Query: 27  CWKAEEILK 1
           CWKAEE+L+
Sbjct: 694 CWKAEEVLR 702


>ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
           gi|449507064|ref|XP_004162923.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
          Length = 844

 Score =  113 bits (282), Expect = 2e-23
 Identities = 52/70 (74%), Positives = 62/70 (88%)
 Frame = -1

Query: 210 ELGKKGYKPDLVLCNSMLSIFAKNRMYNQAHEMVQVIRESGLEPDLITYNSLMDMYARGG 31
           EL K GYKPD+V+ NSMLSIFAKN MY +A +M+ +IRESGL+PDL+TYNSLM+MYAR G
Sbjct: 643 ELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRG 702

Query: 30  DCWKAEEILK 1
           +CWKAEEILK
Sbjct: 703 ECWKAEEILK 712


>ref|XP_002329666.1| predicted protein [Populus trichocarpa] gi|222870547|gb|EEF07678.1|
           predicted protein [Populus trichocarpa]
          Length = 821

 Score =  106 bits (265), Expect = 2e-21
 Identities = 46/69 (66%), Positives = 62/69 (89%)
 Frame = -1

Query: 207 LGKKGYKPDLVLCNSMLSIFAKNRMYNQAHEMVQVIRESGLEPDLITYNSLMDMYARGGD 28
           L K GYKPDLV+ NSMLS+F++  M+++AHE++ +I+E GL+PDL+TYNSLMD+YARGG+
Sbjct: 621 LQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGE 680

Query: 27  CWKAEEILK 1
           CWKAEEIL+
Sbjct: 681 CWKAEEILR 689