BLASTX nr result

ID: Coptis25_contig00019465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019465
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81267.1| hypothetical protein VITISV_006142 [Vitis vinifera]   155   3e-36
emb|CBI34978.3| unnamed protein product [Vitis vinifera]              155   5e-36
ref|XP_002280597.1| PREDICTED: U-box domain-containing protein 4...   155   5e-36
ref|XP_003523065.1| PREDICTED: U-box domain-containing protein 3...   149   4e-34
ref|XP_003527033.1| PREDICTED: U-box domain-containing protein 3...   141   6e-32

>emb|CAN81267.1| hypothetical protein VITISV_006142 [Vitis vinifera]
          Length = 543

 Score =  155 bits (393), Expect = 3e-36
 Identities = 77/143 (53%), Positives = 104/143 (72%), Gaps = 2/143 (1%)
 Frame = -1

Query: 435 KMGSGGKKRWKFSFHRTPSSNTSKPETEQPPKEFTCSISGSMMADPVIVTSGQTFEGNCV 256
           +MG+G K+RW+  +  + SSN SK ++++PPKEF C ISGS+MADPVIV+SGQTFE  CV
Sbjct: 28  EMGNG-KQRWRVFYKSSSSSNASKRQSKEPPKEFLCPISGSLMADPVIVSSGQTFERACV 86

Query: 255 HVCKNLGFTPLLSDGTRPDLTSLIPNIAFKSTILNWCDTHRVDRPVPIAVNVAEKLVMDL 76
            VCK LGF P LS+G+ PD +++IPN+A +STIL+WCD   VDRP P+  + AEK+V  L
Sbjct: 87  QVCKALGFNPTLSEGSSPDFSTIIPNLAIQSTILSWCDKCSVDRPKPLDFDSAEKVVRTL 146

Query: 75  MEVQK--ERVVGKEKEFVKSVTE 13
           M  QK   +    +KE +K+V E
Sbjct: 147 MASQKAENKSEDSDKELIKAVXE 169


>emb|CBI34978.3| unnamed protein product [Vitis vinifera]
          Length = 683

 Score =  155 bits (391), Expect = 5e-36
 Identities = 75/138 (54%), Positives = 100/138 (72%), Gaps = 2/138 (1%)
 Frame = -1

Query: 420 GKKRWKFSFHRTPSSNTSKPETEQPPKEFTCSISGSMMADPVIVTSGQTFEGNCVHVCKN 241
           GK+RW+  +  + SSN SK ++++PPKEF C ISGS+MADPVIV+SGQTFE  CV VCK 
Sbjct: 4   GKQRWRVFYKSSSSSNASKRQSKEPPKEFLCPISGSLMADPVIVSSGQTFERACVQVCKA 63

Query: 240 LGFTPLLSDGTRPDLTSLIPNIAFKSTILNWCDTHRVDRPVPIAVNVAEKLVMDLMEVQK 61
           LGF P LS+G+ PD +++IPN+A +STIL+WCD   VDRP P+  + AEK+V  LM  QK
Sbjct: 64  LGFNPTLSEGSSPDFSTIIPNLAIQSTILSWCDKCSVDRPKPLDFDSAEKVVRTLMASQK 123

Query: 60  --ERVVGKEKEFVKSVTE 13
              +    +KE +K+V E
Sbjct: 124 AENKSEDSDKELIKAVGE 141


>ref|XP_002280597.1| PREDICTED: U-box domain-containing protein 40 [Vitis vinifera]
          Length = 519

 Score =  155 bits (391), Expect = 5e-36
 Identities = 75/138 (54%), Positives = 100/138 (72%), Gaps = 2/138 (1%)
 Frame = -1

Query: 420 GKKRWKFSFHRTPSSNTSKPETEQPPKEFTCSISGSMMADPVIVTSGQTFEGNCVHVCKN 241
           GK+RW+  +  + SSN SK ++++PPKEF C ISGS+MADPVIV+SGQTFE  CV VCK 
Sbjct: 4   GKQRWRVFYKSSSSSNASKRQSKEPPKEFLCPISGSLMADPVIVSSGQTFERACVQVCKA 63

Query: 240 LGFTPLLSDGTRPDLTSLIPNIAFKSTILNWCDTHRVDRPVPIAVNVAEKLVMDLMEVQK 61
           LGF P LS+G+ PD +++IPN+A +STIL+WCD   VDRP P+  + AEK+V  LM  QK
Sbjct: 64  LGFNPTLSEGSSPDFSTIIPNLAIQSTILSWCDKCSVDRPKPLDFDSAEKVVRTLMASQK 123

Query: 60  --ERVVGKEKEFVKSVTE 13
              +    +KE +K+V E
Sbjct: 124 AENKSEDSDKELIKAVGE 141


>ref|XP_003523065.1| PREDICTED: U-box domain-containing protein 38-like [Glycine max]
          Length = 525

 Score =  149 bits (375), Expect = 4e-34
 Identities = 74/140 (52%), Positives = 96/140 (68%)
 Frame = -1

Query: 432 MGSGGKKRWKFSFHRTPSSNTSKPETEQPPKEFTCSISGSMMADPVIVTSGQTFEGNCVH 253
           MG  GK RWKFSFHR+ SS TS P+  Q PKEFTC ISGS+M+DPV+V SGQTFE   V 
Sbjct: 1   MGGNGKHRWKFSFHRS-SSQTSNPDPNQVPKEFTCPISGSLMSDPVVVASGQTFERLAVQ 59

Query: 252 VCKNLGFTPLLSDGTRPDLTSLIPNIAFKSTILNWCDTHRVDRPVPIAVNVAEKLVMDLM 73
           +CK+L F+P L DGTRPD +++IPN+A K+TIL+WCD  R   P+P      E+ V +  
Sbjct: 60  LCKDLNFSPKLDDGTRPDFSTIIPNLAIKTTILHWCDNSRTQPPLPPDYASLERHVREEK 119

Query: 72  EVQKERVVGKEKEFVKSVTE 13
           E Q + +   EKE + +V +
Sbjct: 120 EKQ-DLIRVSEKELLNAVAD 138


>ref|XP_003527033.1| PREDICTED: U-box domain-containing protein 38-like [Glycine max]
          Length = 518

 Score =  141 bits (356), Expect = 6e-32
 Identities = 71/141 (50%), Positives = 92/141 (65%)
 Frame = -1

Query: 432 MGSGGKKRWKFSFHRTPSSNTSKPETEQPPKEFTCSISGSMMADPVIVTSGQTFEGNCVH 253
           MG  GK RWKFSFHR+ +          PPKEFTC ISGS+M+DPV+V SGQTFE   V 
Sbjct: 1   MGGNGKHRWKFSFHRSST---------HPPKEFTCPISGSLMSDPVVVASGQTFERLAVQ 51

Query: 252 VCKNLGFTPLLSDGTRPDLTSLIPNIAFKSTILNWCDTHRVDRPVPIAVNVAEKLVMDLM 73
           +CK+L F+P L DGTRPD ++LIPN+A K+TIL+WCD  R   P P      ++LV++  
Sbjct: 52  LCKDLNFSPKLDDGTRPDFSTLIPNLAIKTTILHWCDNARTQHPRPPDYASLQRLVLEQK 111

Query: 72  EVQKERVVGKEKEFVKSVTEL 10
           E  + RV   E E + +V +L
Sbjct: 112 ENDRVRV--SEMELLNAVADL 130


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