BLASTX nr result

ID: Coptis25_contig00019453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019453
         (1257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273693.2| PREDICTED: uncharacterized protein LOC100263...   238   3e-60
emb|CAN79553.1| hypothetical protein VITISV_025727 [Vitis vinifera]   228   2e-57
emb|CBI22944.3| unnamed protein product [Vitis vinifera]              208   2e-51
gb|ABK94656.1| unknown [Populus trichocarpa]                          201   4e-49
ref|XP_002516985.1| conserved hypothetical protein [Ricinus comm...   155   3e-35

>ref|XP_002273693.2| PREDICTED: uncharacterized protein LOC100263762 [Vitis vinifera]
          Length = 292

 Score =  238 bits (606), Expect = 3e-60
 Identities = 137/297 (46%), Positives = 155/297 (52%), Gaps = 35/297 (11%)
 Frame = +1

Query: 142 MVPEIEKPRVTEIQVRMDCNGCVQKIKRALHGINGIYDLYIDFPQQKLTVVGWADPEKIV 321
           M+PE+EKPRVTEIQVRMDCNGCVQKIK+AL+GINGIYDLYIDFPQQKLT++GWADPEKI+
Sbjct: 1   MIPELEKPRVTEIQVRMDCNGCVQKIKKALYGINGIYDLYIDFPQQKLTIIGWADPEKIM 60

Query: 322 RAIKKTRKIATIYSHTT--------PNDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 477
           +AIKKTRKIATI SHT         P  +                               
Sbjct: 61  KAIKKTRKIATICSHTEPTDPATKPPEQAPEGGGPPPAEAANPPPAEAPQAEAAPPAEPP 120

Query: 478 XXXXXXXXXXXXXXXXXXXSDTGANQPPQPSGPKDXXXXXXXXXXXPN-----DYHHGSN 642
                              +D  A  P +P   KD           P       Y H   
Sbjct: 121 KDPPPPENPPPEATPAPAAADVNAGNPARP---KDVEEVHVIYHHPPEYGYRYGYGHRYG 177

Query: 643 GQWNNHPTGHGYWGN--------------------YRN--GHVFRPEPPVYASHSYNTYK 756
           G WNN+    G                        Y N  G    P PPVY +H YNTYK
Sbjct: 178 GHWNNYSNVQGLQQEPPPTVYTNVQGVHHEPPPTMYTNVQGLHHEPPPPVYVTHRYNTYK 237

Query: 757 PSPYISEYEYVRSPPRQAHYSRMEHYSEDYHSRSNNGDGNNITSMFSDENPNACSII 927
           P PYI+EYEY+RSPPR AHYSRM+ YSEDY  R+ N    NITSMFSDENPNAC I+
Sbjct: 238 PPPYITEYEYIRSPPRHAHYSRMDRYSEDY--RNVNNSNGNITSMFSDENPNACRIV 292


>emb|CAN79553.1| hypothetical protein VITISV_025727 [Vitis vinifera]
          Length = 288

 Score =  228 bits (582), Expect = 2e-57
 Identities = 133/293 (45%), Positives = 151/293 (51%), Gaps = 35/293 (11%)
 Frame = +1

Query: 154 IEKPRVTEIQVRMDCNGCVQKIKRALHGINGIYDLYIDFPQQKLTVVGWADPEKIVRAIK 333
           ++KPRVTEIQVRMDCNGCVQKIK+AL+GINGIYDLYIDFPQQKLT++GWADPEKI++AIK
Sbjct: 1   MQKPRVTEIQVRMDCNGCVQKIKKALYGINGIYDLYIDFPQQKLTIIGWADPEKIMKAIK 60

Query: 334 KTRKIATIYSHTT--------PNDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 489
           KTRKIATI SHT         P  +                                   
Sbjct: 61  KTRKIATICSHTEPTDPATKPPEQAPEGGGPPPAEAANPPPAEAPQAEAAPPAEPPKDPP 120

Query: 490 XXXXXXXXXXXXXXXSDTGANQPPQPSGPKDXXXXXXXXXXXPN-----DYHHGSNGQWN 654
                          +D  A  P +P   KD           P       Y H   G WN
Sbjct: 121 PPENPPPEATPAPAAADANAGNPARP---KDVEEVHVIYHHPPEYGYRYGYGHRYGGHWN 177

Query: 655 NHPTGHGYWGN--------------------YRN--GHVFRPEPPVYASHSYNTYKPSPY 768
           N+    G                        Y N  G    P PPVY +H YNTYKP PY
Sbjct: 178 NYSNVQGLQQEPPPTVYTNVQGVHHEPPPTMYTNVQGLHHEPPPPVYVTHRYNTYKPPPY 237

Query: 769 ISEYEYVRSPPRQAHYSRMEHYSEDYHSRSNNGDGNNITSMFSDENPNACSII 927
           I+EYEY+RSPPR AHYSRM+ YSEDY  R+ N    NITSMFSDENPNAC I+
Sbjct: 238 ITEYEYIRSPPRHAHYSRMDRYSEDY--RNVNNSNGNITSMFSDENPNACRIV 288


>emb|CBI22944.3| unnamed protein product [Vitis vinifera]
          Length = 276

 Score =  208 bits (530), Expect = 2e-51
 Identities = 123/281 (43%), Positives = 139/281 (49%), Gaps = 35/281 (12%)
 Frame = +1

Query: 190 MDCNGCVQKIKRALHGINGIYDLYIDFPQQKLTVVGWADPEKIVRAIKKTRKIATIYSHT 369
           MDCNGCVQKIK+AL+GINGIYDLYIDFPQQKLT++GWADPEKI++AIKKTRKIATI SHT
Sbjct: 1   MDCNGCVQKIKKALYGINGIYDLYIDFPQQKLTIIGWADPEKIMKAIKKTRKIATICSHT 60

Query: 370 T--------PNDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 525
                    P  +                                               
Sbjct: 61  EPTDPATKPPEQAPEGGGPPPAEAANPPPAEAPQAEAAPPAEPPKDPPPPENPPPEATPA 120

Query: 526 XXXSDTGANQPPQPSGPKDXXXXXXXXXXXPN-----DYHHGSNGQWNNHPTGHGYWGN- 687
              +D  A  P +P   KD           P       Y H   G WNN+    G     
Sbjct: 121 PAAADVNAGNPARP---KDVEEVHVIYHHPPEYGYRYGYGHRYGGHWNNYSNVQGLQQEP 177

Query: 688 -------------------YRN--GHVFRPEPPVYASHSYNTYKPSPYISEYEYVRSPPR 804
                              Y N  G    P PPVY +H YNTYKP PYI+EYEY+RSPPR
Sbjct: 178 PPTVYTNVQGVHHEPPPTMYTNVQGLHHEPPPPVYVTHRYNTYKPPPYITEYEYIRSPPR 237

Query: 805 QAHYSRMEHYSEDYHSRSNNGDGNNITSMFSDENPNACSII 927
            AHYSRM+ YSEDY  R+ N    NITSMFSDENPNAC I+
Sbjct: 238 HAHYSRMDRYSEDY--RNVNNSNGNITSMFSDENPNACRIV 276


>gb|ABK94656.1| unknown [Populus trichocarpa]
          Length = 259

 Score =  201 bits (510), Expect = 4e-49
 Identities = 115/262 (43%), Positives = 138/262 (52%), Gaps = 16/262 (6%)
 Frame = +1

Query: 190 MDCNGCVQKIKRALHGINGIYDLYIDFPQQKLTVVGWADPEKIVRAIKKTRKIATIYSHT 369
           MDCNGCVQKIK+ALHGINGIYDLYIDFPQQKLTV+GWADPEKI++AI+KTRKIATI SH+
Sbjct: 1   MDCNGCVQKIKKALHGINGIYDLYIDFPQQKLTVIGWADPEKIIKAIRKTRKIATICSHS 60

Query: 370 TPNDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDTGA 549
            P+D                                                        
Sbjct: 61  EPSDPAAQTTEKPPEQAPEGGAPPPPVSDQANPPTAEAPPAETAASTAEPPKDPPQPENP 120

Query: 550 NQPPQPSGPKDXXXXXXXXXXXPNDYHHGSNGQWNNHPTGHG--------YWGNYRNGHV 705
           + P +   P             P     G      +HP  +G        Y GN+    +
Sbjct: 121 SPPGENPSPVAEETNANQPQRPPGPKDSGEVHVIYHHPPDYGYRYAYGHNYGGNWNRHPI 180

Query: 706 FRPEP-----PVYASHSYNTYKPSPYISEYEYVR-SPPRQAHYSRMEHYSEDYH--SRSN 861
            +  P     P+Y +HSYNTY+PSP ++EYEY+R  PP    YSRM+HY+EDYH  SRSN
Sbjct: 181 SQGVPQAAPKPIYVTHSYNTYRPSPNVTEYEYLRPPPPHHTIYSRMDHYNEDYHDNSRSN 240

Query: 862 NGDGNNITSMFSDENPNACSII 927
           NG   NITSMFSDENPNAC I+
Sbjct: 241 NG---NITSMFSDENPNACRIM 259


>ref|XP_002516985.1| conserved hypothetical protein [Ricinus communis]
           gi|223544073|gb|EEF45599.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 274

 Score =  155 bits (391), Expect = 3e-35
 Identities = 76/137 (55%), Positives = 88/137 (64%), Gaps = 7/137 (5%)
 Frame = +1

Query: 538 DTGANQPPQPSGPKDXXXXXXXXXXXPN-----DYHHGSNGQWNNHPTGHGYWGNYRNGH 702
           +T ANQPPQ SGPKD           P+      Y H S GQWN +P GHG         
Sbjct: 151 ETNANQPPQSSGPKDVGEVHVIYHHPPDYGYRYGYGHSSGGQWNRYPNGHG--------- 201

Query: 703 VFRPEPP--VYASHSYNTYKPSPYISEYEYVRSPPRQAHYSRMEHYSEDYHSRSNNGDGN 876
              PEPP  VY +HSYNTY+PSPY++EYEY+RSPPR   YSRM+HYS+DYH  S NG   
Sbjct: 202 -LPPEPPQPVYVTHSYNTYRPSPYVTEYEYIRSPPRHTTYSRMDHYSDDYHENSRNG--- 257

Query: 877 NITSMFSDENPNACSII 927
           NITS+FSDENPNAC I+
Sbjct: 258 NITSIFSDENPNACRIV 274



 Score =  149 bits (375), Expect = 2e-33
 Identities = 69/80 (86%), Positives = 76/80 (95%)
 Frame = +1

Query: 142 MVPEIEKPRVTEIQVRMDCNGCVQKIKRALHGINGIYDLYIDFPQQKLTVVGWADPEKIV 321
           M PE+EKPRVTEIQVRMDCNGCVQKIK+ALHGINGIYDLYI+ PQQKLTV+GWADPEKIV
Sbjct: 1   MFPELEKPRVTEIQVRMDCNGCVQKIKKALHGINGIYDLYINVPQQKLTVIGWADPEKIV 60

Query: 322 RAIKKTRKIATIYSHTTPND 381
           +AI+KTRKIATI SHT P+D
Sbjct: 61  KAIRKTRKIATICSHTEPSD 80


Top