BLASTX nr result

ID: Coptis25_contig00019452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00019452
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278376.1| PREDICTED: uncharacterized protein LOC100261...   129   3e-28
ref|XP_002524448.1| conserved hypothetical protein [Ricinus comm...   129   3e-28
gb|AFK48714.1| unknown [Lotus japonicus]                              123   2e-26
ref|XP_003524534.1| PREDICTED: uncharacterized protein LOC100777...   123   2e-26
ref|XP_002303635.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26

>ref|XP_002278376.1| PREDICTED: uncharacterized protein LOC100261115 [Vitis vinifera]
           gi|296081638|emb|CBI20643.3| unnamed protein product
           [Vitis vinifera]
          Length = 108

 Score =  129 bits (324), Expect = 3e-28
 Identities = 51/71 (71%), Positives = 63/71 (88%)
 Frame = +2

Query: 98  LQGVSDAKRRKSASVCGVCKGRGFYSCKLCKGESTIKWSPLYDPIAINPCLCPTCEGNRV 277
           L+  +DAKR+K A  CGVC+G+G+Y CKLCKG STI+WSPLYDP+ INPC+CPTC+GNRV
Sbjct: 37  LRAAADAKRKKVALPCGVCRGKGYYICKLCKGNSTIEWSPLYDPVVINPCVCPTCDGNRV 96

Query: 278 QRCLNCVGKGY 310
           Q+CLNC+GKGY
Sbjct: 97  QKCLNCLGKGY 107


>ref|XP_002524448.1| conserved hypothetical protein [Ricinus communis]
           gi|223536236|gb|EEF37888.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 143

 Score =  129 bits (324), Expect = 3e-28
 Identities = 53/67 (79%), Positives = 61/67 (91%)
 Frame = +2

Query: 110 SDAKRRKSASVCGVCKGRGFYSCKLCKGESTIKWSPLYDPIAINPCLCPTCEGNRVQRCL 289
           S+ K RK+AS CGVC+G+GFY CKLCKG +TIKWSPLYDPIA NPCLCPTC+G+RVQRCL
Sbjct: 76  SELKLRKNASPCGVCRGKGFYICKLCKGNATIKWSPLYDPIAFNPCLCPTCDGHRVQRCL 135

Query: 290 NCVGKGY 310
           NC+GKGY
Sbjct: 136 NCLGKGY 142


>gb|AFK48714.1| unknown [Lotus japonicus]
          Length = 104

 Score =  123 bits (309), Expect = 2e-26
 Identities = 52/71 (73%), Positives = 59/71 (83%)
 Frame = +2

Query: 98  LQGVSDAKRRKSASVCGVCKGRGFYSCKLCKGESTIKWSPLYDPIAINPCLCPTCEGNRV 277
           L   S+ KR+K A  C VC+G+GFY CKLC G +TI WSP+YDPIAINPCLCPTCEGNRV
Sbjct: 33  LHFASEKKRKKVALPCLVCRGKGFYICKLCNGNATIAWSPMYDPIAINPCLCPTCEGNRV 92

Query: 278 QRCLNCVGKGY 310
           QRCLNC+GKGY
Sbjct: 93  QRCLNCLGKGY 103


>ref|XP_003524534.1| PREDICTED: uncharacterized protein LOC100777454 [Glycine max]
          Length = 105

 Score =  123 bits (309), Expect = 2e-26
 Identities = 51/73 (69%), Positives = 61/73 (83%)
 Frame = +2

Query: 92  QMLQGVSDAKRRKSASVCGVCKGRGFYSCKLCKGESTIKWSPLYDPIAINPCLCPTCEGN 271
           ++L+  S+ KR K A  C VC+G+GFY CKLC G STI WSP++DPIAINPC+CPTCEGN
Sbjct: 32  KVLRFASEKKREKVALPCRVCRGKGFYICKLCNGNSTISWSPMFDPIAINPCVCPTCEGN 91

Query: 272 RVQRCLNCVGKGY 310
           RVQRCLNC+GKGY
Sbjct: 92  RVQRCLNCLGKGY 104


>ref|XP_002303635.1| predicted protein [Populus trichocarpa] gi|222841067|gb|EEE78614.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score =  123 bits (309), Expect = 2e-26
 Identities = 50/71 (70%), Positives = 60/71 (84%)
 Frame = +2

Query: 98  LQGVSDAKRRKSASVCGVCKGRGFYSCKLCKGESTIKWSPLYDPIAINPCLCPTCEGNRV 277
           L+  +D K R+ A  CG C+G+GFY CKLCKG ++I WSPLYDP+AINPCLCPTC+GNRV
Sbjct: 34  LRFATDLKLRRVALPCGACRGKGFYICKLCKGNASIHWSPLYDPVAINPCLCPTCDGNRV 93

Query: 278 QRCLNCVGKGY 310
           QRCLNC+GKGY
Sbjct: 94  QRCLNCLGKGY 104


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